Lagopus muta (rock ptarmigan): 125688893
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Entry
125688893 CDS
T09141
Symbol
SRF
Name
(RefSeq) serum response factor isoform X1
KO
K04378
serum response factor
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
125688893 (SRF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lmut03000
]
125688893 (SRF)
Transcription factors [BR:
lmut03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box responders to external signals
125688893 (SRF)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SRF-TF
Motif
Other DBs
NCBI-GeneID:
125688893
NCBI-ProteinID:
XP_048791458
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Position
2:complement(105173177..105181631)
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AA seq
552 aa
AA seq
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MLPSQAGAGNGAAAALARGAGLGRSPVPRGANGGGGAAAGPPGARLEREALYSGSEGDSE
SAEEEELGGERRGLKRGLAEAAAAAAAAAVAVPAAGGAAAATAAFGSGGAGGGAVSGAKP
GKKTRGRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVLLLVASETGHVYT
FATRKLQPMITSETGKALIQTCLNSPDSPPRSDPTTDQRMSATGFEETDLTYQVSESDSS
GETKDVLKPTFTVTNLPGTTSTIQTAPTTSSSMQVSSGPSFPITNYLAPVSASISPSAVT
SANGTVLKTTGASAVTSGGLMQIPTGFTLMSGASLSLGTPAIPLPHLQPHLLALSSQQGQ
AVAGTAGQLHQAQHTVFHFPARAGGQIVSLTGGTMAQQVPVQAIQVHQAPQQTSPSSDSS
TDLTQTSPSGTVTLPATIMTSSVPTTVGGHMMYPSPHAVMYAPTSGLADGGLAVLNAFSQ
APSAMQVSHSQVQDQGGVPQVFLTAPSGTVQIPVSAVQLHQMAVIGQQSSSGSSLTELQV
VNLDTSHNAKSD
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgttgccgagccaggccggggccgggaacggcgccgccgccgcgctggcccgcggcgcg
ggcctgggccgctcgccggtgccgcgcggggcgaacggcggcggcggggcggcggcgggg
ccgcccggggcccggctggagcgggaggcgctgtacagcggtagcgagggcgactcggag
tcggcggaggaggaggagctgggcggagagcggcgcggcctcaagcgcggcctggccgag
gcggcggcggcggctgcggcggcggcggtggcggtgcccgcggcgggaggagcggcggcg
gccacggcggcgttcgggagcggcggagcgggcggcggggcggtgagcggcgccaagccc
ggcaagaagacgcggggccgggtgaagatcaagatggagttcatcgacaacaagctgcgg
cgctacaccaccttcagcaagaggaagaccggcatcatgaagaaggcctacgagctgtcg
acgctgacgggcacccaggtgctgctgctggtggccagcgagacgggccatgtgtacacc
ttcgccacccgcaagctgcagcccatgatcaccagcgagacgggcaaggcactcatccag
acgtgcctcaactcccccgactcgccgccgcgctccgaccccaccaccgaccagcgcatg
agtgccacgggcttcgaggagaccgacctcacctaccaggtgtcagagtcggacagcagc
ggggagaccaaggatgtgctgaaaccgaccttcactgtcaccaacctgccagggacaacg
tccaccatccagacggcacctaccacctcgtcctccatgcaggtcagcagcggcccctcg
ttccccatcacgaattacctggcgccagtgtctgccagcatcagccccagtgccgtcacc
agtgccaacgggacagtgctgaagactactggagccagtgcagtgacatccgggggcctc
atgcagatacccaccggcttcaccctcatgtcaggtgcttccctgtctctggggacccct
gccattcctctccctcatttacagccgcacttgctggctctttccagccagcagggccag
gcggtcgcgggtacagctggacagctacatcaggcacagcacacggtcttccacttccct
gccagagctggagggcagatcgtgtcgctgacaggtggcaccatggctcagcaagtccct
gtccaggcgatccaggtgcaccaggcaccgcagcaaacgtctccctccagtgacagcagc
actgaccttactcagacctctcccagtggaacagtgaccctcccagcgaccatcatgacg
tcgtctgtgccaaccaccgtgggtggccacatgatgtaccccagcccgcacgcggtgatg
tacgcgcccacctctggccttgcggatggtggacttgcagtcctcaatgctttctcgcag
gcaccctcagcaatgcaggtgtcccacagccaggtccaggatcagggtggcgtcccccag
gtattcttgacagccccatcaggcaccgttcagatcccagtctcagctgtccagcttcac
cagatggctgtcattgggcagcagagcagcagcggcagcagcctgacggagctgcaggtg
gtcaacttggacacctcgcacaacgccaagagtgactga
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