Lagopus muta (rock ptarmigan): 125689245
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Entry
125689245 CDS
T09141
Symbol
SOGA3
Name
(RefSeq) LOW QUALITY PROTEIN: protein SOGA3
KO
K27704
microtubule cross-linking factor
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lmut03036
]
125689245 (SOGA3)
Chromosome and associated proteins [BR:
lmut03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
125689245 (SOGA3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SOGA
TSC22
Ax_dynein_light
bZIP_1
Halo_GVPC
YabA
Fez1
DivIC
DUF2968
Motif
Other DBs
NCBI-GeneID:
125689245
NCBI-ProteinID:
XP_048792154
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All DBs
Position
2:complement(51497082..51523135)
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AA seq
1018 aa
AA seq
DB search
MKKSMRKWGVCGFKYSCGMAARIGIGLAQRRKTAIGERGEGRVLSLSPLEPLGPKLWPSA
SVIAAPAGPTGSTPGEAGWLLGSFCSSPPRPHSPDRLLRFSSPAGSAKDDXRDGHLPPIA
VAMSQPPAGGAAAEPRLHPEGSSGRKQQRASSPARARDAAARPPPAAAAAAASRAPPAAA
SALKTGTARPPPGQSTRAARGRAAEKQPRSAASPGAVHPGAGAEAQLAAGGRTAAEEPAE
EAPPAGSGAGEREGAVAPPPRQWRGKAGRAPPKGAGEAAPAPPSSAVAGKGRGAAGGGGY
WKEGCLQSELIQFHLRKGLAAAAQMQTKGNNHSAGAAAAAAAAASAAAASAEPPSAAPAS
SPSAMAAAGAEGLRQGEAGCRNGTPEGSLSPQPQDEMQEEMEKLREENESLKNEIDELRT
EMDEMRDSFFEEDACQLQEMRHELERANKNCRILQYRLRKAERKRLRYAQTGEIDGELLR
SMEQDLKVAKDVSVRLHHELENVEEKRTVTEDENEKLRQQLIEVETAKQALQNELEKMKE
QSLKRRGSKDLQKSEKKSQQTPTEEDNEDLKCQLQFVKEEAALMRKKMAKIDKEKDRFEH
ELQKYRSFYGDLDSPLPKGEAGGPPTTREAELKLRLRLVEEEANILGRKIVELEVENRGL
KAELDDLRGDDFSGATNPLLGEQSESLSELRQHLQLVEDETELLRRNVADLEEQNKRITA
ELNKYKYKSGAHESSRHHDNAKTEALQEELKAARMQINELSGKVMQLQYENRVLMSNMQR
YDLASHLGIRGSPRDSDAESDAGKKESDDDSRPPHRKREGPIGGESDSEEVRNIRCLTPT
RSFYPTPSGWQKSFTDRQQMKDIRCEAERLGKTIDRLISDTSTIITEARIYVANGDLFGL
MDEEDDGSRIREHELLYRINAQMKAFRKELQTFIDRLEVPKSSDDRSADEPLSVSQVDFY
LLWPTGKKPWPKELRLKFDVWHLKILKLECGQKFLLNYFKSLFGYMQICSTMGPICKW
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagagcatgaggaaatggggggtgtgtggattcaaatacagctgtggtatggca
gcacgtataggaataggtttggctcagaggaggaaaacagcaatcggtgaaagaggagag
ggaagagttctcagtctcagccctttggagcccctcggacccaagttgtggccttcggcc
tcggtcatcgctgcgcccgcggggccaactggcagcacgccgggcgaggcgggctggttg
ctgggcagcttctgctcgtcgccaccgcgtccccactcgcccgatcgtcttctccgcttc
tcttccccagccggcagcgccaaagacgactagagggatggccaccttccgccgatagcc
gtcgccatgagccaaccgcccgcagggggcgccgccgccgagcctcgcctccatcccgag
ggcagcagcggcaggaagcagcagcgagcctcctccccggccagagcccgcgacgccgcc
gcgcggccgccgcccgccgcggccgccgccgccgcctcccgcgccccgcccgccgccgcc
tccgccctgaagaccgggaccgcgcggccgccgccgggccagtccaccagggccgcccgc
ggtcgcgccgccgagaagcagccgcggagtgcggcctcgccgggagctgtccatcccggc
gccggtgctgaagcgcagctcgctgccggcgggaggaccgcggccgaagagcccgccgag
gaggcgccccctgcgggaagcggcgcgggggagcgcgagggggcggtggcgccgccgccc
aggcagtggcgggggaaagcggggcgggctccgccgaagggcgcgggggaggcggccccc
gcgcctccatcttccgcggtcgcggggaagggccgcggggcggcgggcggcggcgggtac
tggaaggagggatgcctgcagagtgagctcatccagttccacctcaggaaggggctggcg
gcggccgctcagatgcaaaccaagggcaacaaccacagcgccggtgctgctgctgccgcc
gccgccgccgcctccgcggccgccgcctcggccgagcctccctcggcagcccccgcctcc
tcgccctctgccatggcggcggccggggccgaggggctgcggcagggcgaggcgggctgc
aggaacggcacacccgagggttcactgagcccgcagccgcaggacgagatgcaagaggaa
atggagaagctgcgggaggagaacgagagcctcaagaacgagatagatgagctgaggact
gagatggatgagatgagggacagcttcttcgaggaggacgcttgtcagcttcaagaaatg
cgccacgagctggagagagccaacaagaactgccggatcctccagtaccggctgcgcaag
gccgagcgcaagaggctccgctacgcacagactggtgagattgacggtgagctgctgcgc
agcatggagcaggacctcaaggttgcaaaagatgtatcagtgagacttcatcatgagtta
gagaatgtagaagaaaagcgtactgtaacagaagatgaaaatgaaaaattaagacagcag
cttatagaagttgaaactgcaaaacaggcactgcagaatgaactggaaaaaatgaaagag
cagtcattgaaaagaagagggagcaaagacctacaaaaatcagagaaaaagtcacagcaa
acaccaacagaggaggacaacgaagacttgaaatgccagctgcagtttgtcaaagaagaa
gcagctttgatgaggaagaaaatggctaagattgataaggagaaggacagatttgaacac
gagctgcaaaaatatagatcattttatggtgatttagacagccctttgccaaaaggtgaa
gcaggcggtccacctaccacaagggaagctgaactcaagcttcggttgagacttgtggaa
gaggaagctaacattcttgggagaaaaatagtggagctagaagtagaaaatagaggatta
aaagcagagctagatgacttaagaggagatgatttctcaggggccaccaatccactcctg
ggagaacagagtgaatccttgtcagaattaagacagcatttgcagctagtagaagatgag
acagaattgctgaggagaaatgtagctgacttggaagaacaaaacaaacgcataacggct
gagctgaacaaatacaaatacaaatccggagcccacgagagctctaggcaccacgataat
gccaagactgaagcactgcaggaggagctaaaagctgcacgaatgcagatcaatgagctg
agtggcaaagtcatgcaactccagtatgagaatagagtgcttatgtccaacatgcaacgc
tatgatttagcctctcatcttgggatccgtggcagccccagagacagtgatgcagaaagt
gatgcaggaaaaaaggagagcgatgatgattcccgtccccctcaccgcaaaagggaaggg
cccatcggtggggaaagtgactcagaagaggtgagaaatattcggtgcctgacacccacg
agatctttttatccaacaccatctgggtggcagaaaagcttcactgacaggcagcagatg
aaggacattcgttgtgaagctgagcgactgggcaagacaatagatcgcttgatttccgac
acaagcaccatcataacagaggcaagaatttatgtagctaatggggacctgtttggactg
atggatgaggaagacgatggcagcaggatacgcgagcatgagcttctttacaggatcaat
gcgcagatgaaggcgttcaggaaagaactccagactttcatcgacagacttgaagttccg
aagtcttcggatgatcggagtgcggacgaacctttgtcagtgagtcaggtagacttttac
ttattatggcctacaggtaaaaaaccttggccaaaagaattaagactaaaatttgatgta
tggcaccttaaaattcttaaactagaatgtggacaaaaatttctattaaattattttaaa
tccttatttggctatatgcaaatttgttctaccatgggacctatttgtaaatggtga
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