Lagopus muta (rock ptarmigan): 125689252
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Entry
125689252 CDS
T09141
Symbol
TAF1B
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit B isoform X1
KO
K15213
TATA box-binding protein-associated factor RNA polymerase I subunit B
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lmut03021
]
125689252 (TAF1B)
Transcription machinery [BR:
lmut03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
125689252 (TAF1B)
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Gene cluster
GFIT
Motif
Pfam:
Rrn7_cyclin_C
Rrn7_cyclin_N
Zn_ribbon_RRN7
Motif
Other DBs
NCBI-GeneID:
125689252
NCBI-ProteinID:
XP_048792161
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Position
2:complement(14624194..14668395)
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AA seq
582 aa
AA seq
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MDEEDAGGFDERCAQCSEVNWGLTDGGRFYCRTCHNVIERTREVVSTDVIPNARIQTISK
GSRSQKKTDEGWEWYVCEGFQLVLKQQAEALEALGVCPQMKDEILCNFWRRYLQKSQQAY
CNRPAGETIKALSVCDSSTDMDSEPEQPSLLHFLSVSESDGDLQTDCSYASSVGKVSEST
SVCSGSVDGSLYVRKNRKDKLRMSMPMTLSFCYMALLWLKEPMTLSELLRFVVEGHIPYF
NAYQHFPEKMKLYGLDLRIFCVESWPVYEEVYNKMVELAAFLDLPRFPDITDNCFLHPNV
LCMKYLMEANLPDELHNWTCRVVKKTSMGEADFLTLTPGNKSTRKVKYDVLAAAVIVVVL
KLLFLLDDHYEWLLSDFSSERKKNNKEGEGGPYFEFKKWYKVIKCTLDVEQKKLDEEKAK
YLWKCEKPLFYSVKKKSKILRRRQMVENLQNQFGKLSGSVRPAGRPNPSSFQLSWSEENT
DGSCFHGHSLKGILQEKHGLLTAINTDYWLCTDKLCNEKLCGHLAHYREEDFPKSYHFVL
RLFSFLLRIQPSSIHEEVCVIEHKLFNKKLYKKPKYSRSLRK
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atggacgaggaggacgcgggaggttttgatgagcgctgtgcacagtgttcagaagtaaac
tggggtctcactgatggaggcagattttactgcagaacttgccacaatgttattgagaga
actcgagaagttgtaagcaccgatgttatccctaatgcaagaatccagacaatctccaaa
ggctctagaagtcagaaaaaaactgatgaaggctgggagtggtatgtttgtgaaggcttt
cagctggtactaaagcaacaagctgaagctttggaagcattaggagtgtgcccacaaatg
aaggatgaaattctgtgcaatttttggaggcgttaccttcagaagagccaacaggcatat
tgcaacagaccagctggtgaaactatcaaggcattatcagtatgtgatagcagtacagat
atggacagtgaaccagagcaacctagcctgcttcattttttatctgtctctgaaagtgac
ggggatctacagacagattgcagctatgcctcatcagttggcaaggtctcagaaagcacc
tctgtatgctctgggtcagtagatggtagcttgtacgtaaggaagaaccgaaaggacaaa
ttgaggatgtcaatgccaatgaccctttcgttttgttacatggcattactctggctgaaa
gaaccgatgacgttatctgagctcttaaggtttgttgttgaaggtcatattccatatttc
aatgcttatcagcactttccagagaagatgaagttatatggccttgatcttaggatcttt
tgtgtggagtcatggcctgtatatgaagaagtctacaacaaaatggtcgaacttgcagct
tttttagacctgcctcgttttccagatataacagacaactgctttctgcatccaaatgtg
ttgtgcatgaagtacttgatggaagctaatttacctgatgaattgcacaactggacttgt
cgcgtggtcaaaaagacttccatgggagaggcggatttcctgactctcacgcctggaaat
aaatcaacaaggaaagtgaaatatgatgtccttgcagcagcagttattgtggtggttcta
aagttactgtttttattagatgatcactacgagtggttgctctcagacttctcttcagaa
agaaagaaaaataacaaagaaggtgaaggtggtccatatttcgagttcaaaaagtggtac
aaggttataaaatgtaccttggatgtggagcaaaaaaaactggatgaagaaaaagccaag
tatctgtggaaatgtgagaagccgctgttttattcagtcaagaagaaatctaaaatcctt
aggagaagacaaatggttgagaacttgcaaaatcagtttggcaagttgtctggttcggtg
cgacctgcaggaaggccaaatccgtcaagttttcagttaagctggtctgaagaaaacaca
gatgggtcttgttttcatgggcatagcctgaagggaattttgcaagaaaaacatggttta
cttacagccatcaacacagactattggctttgtacagataaactgtgtaatgagaaattg
tgcggtcatctggctcactacagagaagaggactttcccaagagctaccattttgtactg
agacttttctcctttcttctgaggatacagccttcctccatccatgaagaggtgtgtgtg
atagaacacaaactttttaacaaaaaactctataaaaagccaaaatacagcaggagccta
aggaagtaa
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