KEGG   Lagopus muta (rock ptarmigan): 125689377
Entry
125689377         CDS       T09141                                 
Symbol
TBPL1
Name
(RefSeq) TATA box-binding protein-like 1
  KO
K03120  transcription initiation factor TFIID TATA-box-binding protein
Organism
lmut  Lagopus muta (rock ptarmigan)
Pathway
lmut03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:lmut00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    125689377 (TBPL1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:lmut03000]
    125689377 (TBPL1)
   03021 Transcription machinery [BR:lmut03021]
    125689377 (TBPL1)
Transcription factors [BR:lmut03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   TATA-binding proteins
    125689377 (TBPL1)
Transcription machinery [BR:lmut03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     125689377 (TBPL1)
  RNA polymerase III system
    TFIIIB
     125689377 (TBPL1)
  RNA polymerase I system
    SL1/TIF-1B
     125689377 (TBPL1)
SSDB
Motif
Pfam: TBP DUF3378
Other DBs
NCBI-GeneID: 125689377
NCBI-ProteinID: XP_048792341
LinkDB
Position
2:54322933..54335395
AA seq 183 aa
MDADSDVALDILITNVVCVFRTRCHLNLRKIALEGANVIYKRDVGKVLMKLRKPRITATI
WSSGKVICTGATSEEEAKFGARRLARCLQKLGFQVIFTDFKVVNVLAVCNMPFEIRLPEF
TKNNRPHASYEPELHPAVCYRIKTLRATLQIFSTGSITVTGPNVKAVASAVEQIYPFVFE
SRK
NT seq 552 nt   +upstreamnt  +downstreamnt
atggatgcagacagtgatgttgcattggacattttaatcacaaatgtagtgtgtgttttt
agaacaagatgtcatttaaacttgagaaagattgcattagagggagcaaatgtgatatac
aagcgtgatgttgggaaagtattaatgaaacttagaaaacctaggattacagccacaatt
tggtcctcaggaaaagttatttgcacaggagccacaagtgaagaagaagctaaatttggt
gccagacgattagctcgttgtctacagaaactaggttttcaggtaattttcacagatttt
aaagttgtgaatgttttagcagtgtgcaacatgccctttgagatcagattgccagaattt
acgaagaataacagacctcatgctagttatgaaccagaacttcatcctgctgtgtgctac
agaataaaaactctcagagctaccttacagattttttcaactggcagtatcacagttaca
gggccaaacgtaaaggctgtcgccagtgctgtggagcagatttaccccttcgtgtttgaa
agcagaaaataa

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