Lagopus muta (rock ptarmigan): 125689377
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Entry
125689377 CDS
T09141
Symbol
TBPL1
Name
(RefSeq) TATA box-binding protein-like 1
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
125689377 (TBPL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lmut03000
]
125689377 (TBPL1)
03021 Transcription machinery [BR:
lmut03021
]
125689377 (TBPL1)
Transcription factors [BR:
lmut03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
125689377 (TBPL1)
Transcription machinery [BR:
lmut03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
125689377 (TBPL1)
RNA polymerase III system
TFIIIB
125689377 (TBPL1)
RNA polymerase I system
SL1/TIF-1B
125689377 (TBPL1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TBP
DUF3378
Motif
Other DBs
NCBI-GeneID:
125689377
NCBI-ProteinID:
XP_048792341
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All DBs
Position
2:54322933..54335395
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AA seq
183 aa
AA seq
DB search
MDADSDVALDILITNVVCVFRTRCHLNLRKIALEGANVIYKRDVGKVLMKLRKPRITATI
WSSGKVICTGATSEEEAKFGARRLARCLQKLGFQVIFTDFKVVNVLAVCNMPFEIRLPEF
TKNNRPHASYEPELHPAVCYRIKTLRATLQIFSTGSITVTGPNVKAVASAVEQIYPFVFE
SRK
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atggatgcagacagtgatgttgcattggacattttaatcacaaatgtagtgtgtgttttt
agaacaagatgtcatttaaacttgagaaagattgcattagagggagcaaatgtgatatac
aagcgtgatgttgggaaagtattaatgaaacttagaaaacctaggattacagccacaatt
tggtcctcaggaaaagttatttgcacaggagccacaagtgaagaagaagctaaatttggt
gccagacgattagctcgttgtctacagaaactaggttttcaggtaattttcacagatttt
aaagttgtgaatgttttagcagtgtgcaacatgccctttgagatcagattgccagaattt
acgaagaataacagacctcatgctagttatgaaccagaacttcatcctgctgtgtgctac
agaataaaaactctcagagctaccttacagattttttcaactggcagtatcacagttaca
gggccaaacgtaaaggctgtcgccagtgctgtggagcagatttaccccttcgtgtttgaa
agcagaaaataa
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integrated database retrieval system