Lagopus muta (rock ptarmigan): 125689427
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Entry
125689427 CDS
T09141
Symbol
COL21A1
Name
(RefSeq) collagen alpha-1(XXI) chain
KO
K16629
collagen type XXI alpha
Organism
lmut
Lagopus muta (rock ptarmigan)
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Gene cluster
GFIT
Motif
Pfam:
Collagen
VWA
VWA_2
Laminin_G_3
VWA_3
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
125689427
NCBI-ProteinID:
XP_048792469
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Position
2:complement(23708390..23811980)
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AA seq
957 aa
AA seq
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MAQLVRLFQTLLILLLRDYISAEDGETRASCRTAPADLVFILDGSYSVGPENFEIIKRWL
VNITRNFDIGPKFIQVGVVQYSDYPVLEIPLGTHESTENLIREMESIHYLGGNTRTGRAI
QFAYDHLFAKSSRFLTKIAVVLTDGKSQDEVKDVAAEARKNKITLFAIGVGSEIEEDELK
AIANKPSSTYVFYVEDYIAISRIKEVIKQKLCEESVCPTRIPVAARDEKGFDILVGLGVK
KKVKKRIQIPTTNAKAYEVTSRVDLSELTRNVFPEGLPPSYVFVSTQRFKVKKTWDLWRV
LSLDKRPQIAVTVNGEEKTLSFTTTSLINGTQVITFAAPRVKTLFDEGWHQIRLLVTEDF
VTLYIDDQEIETKALHPVLGIYISGLTQIGKYSGKEETVQFDIQKLRIYCDPEQNNRETV
CEIPGFNGECMNGPSDVGSTPAPCICPPGKQGPPGPKGDPGQPGNHGYPGQPGPDGKPGY
QGSAGTPGIPGTPGVQGPRGLPGIKGEPGKDGTKGDRGLPGFPGLHGMPAPKGERGPKGD
QGLPGIYGKKGSKGEKGDTGFPGMPGRSGDPGRSGKDGLPGSPGFKGEVGQPGSPGLEGH
RGEPGIPGIPGNQGAKGQKGEIGPPGLPGSKGSPGETGLMGPEGSFGLPGAPGPKGDKGE
PGLQGKPGSSGAKGEPGGPGAPGEPGYPGIPGIQGIKGDKGSQGENGIQGQKGEKGRQGN
PGLQGTEGLRGEQGEKGEKGDPGNRGINGQKGESGIQGLVGPPGVRGQPGDRGPPGPPGS
DGKPAREFSEEFIRQVCSDVLRTQLPVILQSGRLQNCNHCQSQSASPGLPGPPGPRGPEG
PRGFPGLPGNDGVPGLTGIPGRPGARGTRGLPGKNGAKGNQGIGVPGIQGPPGPPGPEGP
PGMSKEGRPGERGQPGKDGDRGSPGMPGPVGPPGICDPSLCFSVIVGRDPFRKGPNY
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atggcacagcttgtaagactttttcagacactgttaattctgctgcttcgtgactacatc
tcagctgaagatggggaaacaagagcaagttgcagaactgctccggctgatttagtcttt
atcttagatggctcttacagtgttggcccagaaaactttgaaataatcaaaagatggctg
gtcaatattacaagaaattttgacatagggccaaaatttatccaagttggagtagttcag
tacagtgattaccctgtacttgaaatccctctaggaactcatgaatccactgaaaatctt
atcagggaaatggaatccatacattacttgggaggaaatacaagaacgggaagagctatt
caatttgcctatgaccatctttttgccaaatcttcaagatttttaacaaaaatagcagtt
gttctcacagacggaaaatcccaagatgaagtcaaagatgtagcagcagaagcaaggaaa
aataaaatcactttgtttgcaattggtgtaggctcagaaattgaggaggatgaacttaaa
gctattgccaacaagccttcatcaacttatgtattttatgttgaagattatattgcaata
tcaagaattaaagaagttataaagcagaagctctgtgaagaatctgtttgtcctacaaga
attccagtggcagctcgagatgaaaaaggatttgacattcttgtaggactaggtgtgaag
aaaaaggttaaaaagagaattcaaataccaactactaatgctaaagcttatgaagtaaca
tcccgtgttgatctgtcagagttgacaaggaatgtgtttccagaaggtttgcctccatcc
tatgtgtttgtttccactcaaagatttaaagtaaaaaagacatgggatttgtggagagtt
ctgagcctggataagagaccacagatagcagtcacagttaatggagaagagaaaacattg
tcattcactacaacaagtttaataaatggcacgcaggttattacttttgctgcacctcgt
gtaaagacattgtttgatgaaggctggcatcaaattcgtctcttagttacagaagacttt
gtaactttatatatagatgaccaagaaattgaaacaaaagcattacatcctgttttaggt
atttacatcagtggactgacccaaataggaaagtattctggaaaggaggaaactgtacag
tttgacatacaaaaactgcgaatctactgtgacccagagcaaaataatcgagagacagtc
tgtgagatcccaggatttaatggagagtgcatgaatggcccaagtgatgtaggctccaca
cctgccccctgcatatgccctccagggaaacaaggacctccaggccccaaaggagatcct
gggcagcctgggaatcatggttatcctggtcagcctggtccagatggtaagcctggttat
caaggatcagcaggaactccaggtatcccaggaactccaggggttcaaggaccacgtggc
ttaccaggtatcaagggagaaccaggaaaggatggaacaaagggtgaccgtggactgcct
ggttttcctggattacatgggatgccagcaccaaagggagaaaggggccctaaaggagac
caaggactgccagggatatatggaaaaaagggatcaaagggagagaaaggtgatacaggg
tttccaggaatgcctgggcgatccggagaccctggcagaagtgggaaagatggattgcca
ggaagtcctggtttcaagggagaagttgggcagcctggatctccaggactagagggacat
cggggagagcctggaattcctggaatccccggaaatcaaggagcaaaaggacaaaagggt
gaaattggaccgccgggtctaccaggatcaaaagggtcaccaggggaaactggtttgatg
ggaccagaaggctcatttggactacctggagctcctgggcctaagggtgataaaggtgaa
cctggtctacaggggaaaccaggatcatcaggagccaagggagaaccaggaggaccgggt
gccccaggtgaaccaggctatccaggcattcctggtatccagggtataaagggggacaaa
ggaagccagggtgaaaatggtatccaggggcaaaaaggagaaaaaggaagacaaggaaat
ccaggcttacagggaacagaaggattgaggggcgaacaaggagagaaaggtgagaaggga
gacccaggcaatcgaggcatcaatggacagaagggagaatccggtatccagggtctggtt
ggacctcctggtgtcagaggtcagcctggagacagagggcccccaggaccacctggatca
gatggaaaacctgcacgagaattttcagaagaatttattcgacaggtctgttcggatgta
ctgagaacccagttacctgtgatccttcagagtggaaggctgcaaaactgcaaccactgt
cagtcccaaagcgcttccccaggacttccaggaccaccaggtccaagaggccctgaaggt
ccaagagggtttcctggtttgccagggaatgatggtgttccaggtctgactggcatccca
ggtcgccctggggcccgtgggacaagaggattgccagggaaaaatggtgcaaaaggcaat
caaggaattggggttcctgggatccaaggcccaccagggcctccaggtcctgaaggtccc
ccaggtatgagtaaggaaggacgccctggagaacgtgggcagcctggtaaagatggagat
cgtggcagtcccggaatgccaggaccagttggaccccctggaatctgtgacccatcactg
tgttttagtgtcattgttggaagagacccatttagaaagggaccaaattattaa
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