Lagopus muta (rock ptarmigan): 125689491
Help
Entry
125689491 CDS
T09141
Symbol
PEX6
Name
(RefSeq) peroxisome biogenesis factor 6
KO
K13339
peroxin-6
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
125689491 (PEX6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lmut04131
]
125689491 (PEX6)
Membrane trafficking [BR:
lmut04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
125689491 (PEX6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_16
AAA_lid_3
AAA_22
AAA_5
Mg_chelatase
nSTAND3
TsaE
AAA_7
AAA_25
DUF815
RNA_helicase
AAA_33
RuvB_N
Vps4_C
bpMoxR
NPHP3_N
PEX6_4th
AAA_29
TIP49
AAA_28
Parvo_NS1
IstB_IS21
AAA_14
AAA_24
T2SSE
Motif
Other DBs
NCBI-GeneID:
125689491
NCBI-ProteinID:
XP_048792653
LinkDB
All DBs
Position
2:94241869..94255806
Genome browser
AA seq
990 aa
AA seq
DB search
MAVAVLRPLDAPPAELVPVTALLLAPPPLCAALRGRGGGLVLAVRPAGRVGAQAVLLSAV
ALEAGGRRGAELWLRGALLRRLGLAAGRRVAVWPVRRPPPLAWVLLGAAAAVGRAGRPAG
SAVLARRGEALPGPGPGPGPLVLEARPALQGLLGNGTRVALAAPPPREAEAGPAPAPAPG
GGAPCRRPAAPPVVSRFAAGRGRAEGPRLRAAPPCGGAGSGVAEVWVSRRGLLALGLFQG
EWVRVSAEGAARPHLAAVFARPLAWDYPRAARRRPPDGAALLAPALAFNLGCEPGGGTHV
CLQRYDGVPGAAEGKGSRSLLPVPPFAAELHVEMICSPAYCARAVYDRLLYRHFQTPRLV
QEGDVLCVPTFGCAEFLDGNADKLLRWPELYFKVRKVLGSVEGMQSEGYLADTQNTSLYL
VGSTNSAVPSAPAYTSHEFWSSLSPAGLSDVVKELCDALRPYLTSQAAALNGAGSVLLSG
PSGSGKAMAVRAVCSCLNLHLFKVDCVSLCGDTSAATEEKIQMAFAQAQQYRPCVLLLKD
IEVLGRDRDRLGEDARVIATLRQLLLDRDPALSSHPVLVIGTTCKPQDVPTDVQTAFLHE
VKIEALSEDQRRAILSTLTASLPLGKEVNLAKLARRTAGFVLGDFCALLSHSSRAACTRI
QALSFPGGLSEEVERDFCTAGFPVLEEDFSVALDQLHDAHSQAVGAPKIPSVSWQDVGGL
HEVKKEILDTIQLPLEHPELLSLGLCRSGLLLYGPPGTGKTLLAKAVATTCTMTFLSVKG
PELINMYVGQSEENVRNVFARARAAAPCIIFFDELDSLAPNRGRSGDSGGVMDRVVSQLL
AELDGLHSSREVFVIGATNRPDLLDSALLRPGRFDKLVYVGVNEDRESQLQVLSAVTRKF
KLDPSVNLSSILEECPAQLTGADIYSLCSDAMMCAVKRKVEWIEEGLDTESSALTLTMED
FLQAAARLQPSVSEQELLRYKLIQQKFAAC
NT seq
2973 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggcggtgctgcggccgctggacgcgccgccggcggagctggtgccggtgacg
gcgctgctgctggctccgccgccgctctgcgcggctctgaggggccgcggcggcgggctg
gtgctggcggtgcggccggcggggcgcgtcggggcgcaggccgtgctgctaagcgccgtg
gcgctggaggcgggcgggcggaggggcgccgagctgtggctgcgcggggcgctgctgcgc
cgcctggggctggcggcgggccgccgggtggccgtgtggccggtgcgccgcccgccgccg
ctggcctgggtgctgctgggggcggcggcggcggtggggcgggcggggaggccggcgggc
agcgcggtgctggcgcggcgcggcgaggccttgccggggccgggcccgggcccgggccct
ctggtgctggaagcgcggccggcgctgcaggggttgctaggcaacggtacgcgcgtcgcg
ctcgccgccccgccgccgcgcgaggccgaggccgggcccgctcccgctcctgctcccgga
ggcggcgccccctgccggcgccccgccgcgccgcccgtcgtctctcgtttcgccgccggg
cgcgggcgggcggaggggccgcggcttcgggcggcgcccccttgcggcggggcgggaagc
ggagtggccgaggtgtgggttagccggcgcgggctgctggcgctggggctcttccaggga
gagtgggtgcgggtgagcgccgagggggcggcccggccgcacctggccgcggtgttcgcc
cgcccgctcgcctgggactacccgcgggccgcccgccgcaggcccccggacggcgccgcc
ctgctggcgcccgccctcgccttcaacctgggctgcgagcccggcggcgggacgcacgtc
tgcctacagaggtacgacggggtgcccggggctgcggaagggaagggtagccgctccttg
ctccccgtgccgcccttcgccgcggagctgcacgtcgagatgatctgctcgcctgcctac
tgcgcccgagccgtgtacgaccgccttctctaccggcacttccagacgccccggctggtc
caggagggagatgtcctctgtgttccaacatttggatgtgccgagtttttagatggaaat
gcagacaaactccttaggtggccggagctttacttcaaagtgaggaaggtattaggctcg
gtggaaggcatgcagtccgagggttacctggcagacacccaaaacacctctctgtatctg
gtgggttcaacaaacagtgctgtcccatctgccccagcgtataccagccatgagttctgg
agcagtttgtctcctgctggactttctgatgttgtgaaggagctctgcgatgctcttcgg
ccttacctgaccagtcaggcagcagcattgaacggggctggcagcgttctcctctcaggt
ccgagtggcagtgggaaagcaatggccgtcagagctgtgtgcagctgcctcaacctccac
ctcttcaaggttgattgtgtcagtttgtgcggtgacaccagtgcagctacagaggagaaa
atacagatggcctttgcccaggcccagcagtatcgtccctgtgtgcttctactgaaagac
atagaggtgcttggcagagatcgggacaggctaggagaggatgccagggtcatcgctact
ctgaggcagctgcttctggacagagatccagcactgagcagccaccctgtcctagtgata
ggcacaacctgcaagccccaggatgttcctacagatgtgcagactgctttccttcacgag
gtgaaaattgaggccctttcggaagaccagaggagggcgatactgagcacgctgactgcc
agtcttcctctgggcaaagaagtgaacctagccaagctggcccgcaggactgcaggtttt
gtgctgggagatttctgtgccttgctgtcccacagcagccgggctgcttgtacccgcatc
caggccttgagttttccaggtggactgagtgaggaagtggagagagatttttgcactgct
ggcttcccagtcctcgaggaggatttcagtgttgcactggaccagctacatgatgcccat
tcacaggcagtgggagccccaaagatcccctccgtgtcctggcaggacgttggtgggctc
catgaggtgaagaaggagatcctggacactatccagttgcccctggagcacccggaactg
ctgtcactgggtctgtgccgctctggtctgctgctgtacggacctcctgggacagggaag
accttgctggcaaaagctgtggcgaccacatgcaccatgacattccttagtgtgaaaggg
ccagagctcatcaacatgtatgttggacaaagcgaggagaacgtgcgtaatgtgtttgcc
agagccagggcagctgctccctgcattatcttctttgatgaactggattctctggcccca
aatcgtgggcggagtggagattcaggaggtgtcatggacagagttgtctcacagctcctg
gctgaactggatggcctccattccagcagagaggtgtttgtcattggagcaaccaacagg
cctgacctcctggattcagctctgctccggccaggcagatttgacaagctggtctatgtg
ggcgtaaatgaagaccgggagtcacagctgcaggtgttgagtgccgtcaccaggaagttt
aaactggatccttctgtgaacctcagcagcatcctagaagaatgcccggctcagctgaca
ggagctgatatctactcactgtgctcagatgccatgatgtgtgctgtcaaacgcaaggtg
gaatggatcgaggaggggttggatacagagagctctgctctcacactcaccatggaagac
ttcctgcaggctgctgcgaggttgcagccatcagtctctgagcaggagctcctcaggtac
aaactcatccagcaaaagtttgctgcctgctaa
DBGET
integrated database retrieval system
