Lagopus muta (rock ptarmigan): 125689793
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Entry
125689793 CDS
T09141
Symbol
FDFT1
Name
(RefSeq) squalene synthase
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut00100
Steroid biosynthesis
lmut01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
125689793 (FDFT1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
lmut01006
]
125689793 (FDFT1)
Enzymes [BR:
lmut01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
125689793 (FDFT1)
Prenyltransferases [BR:
lmut01006
]
Terpene biosynthesis
Squalene/phytoene synthase
125689793 (FDFT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
SCC3_C
HAUS4
Motif
Other DBs
NCBI-GeneID:
125689793
NCBI-ProteinID:
XP_048793396
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All DBs
Position
2:complement(3638758..3649910)
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AA seq
418 aa
AA seq
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MELLRKWLGHPEDIYHLLRFKMGGYRVVMPRMDPDSLGLGLRTCYRYLNQTSRSFAAVIQ
ALDGELRHAVCIFYLVLRALDTIEDDMTISLDVKVPMLIEFHSYLYQPEWKYMESKEKHR
QVLEDFPTISMEFRNLAKVYQDVISDICHKMGVGMAEFLEKKVDSQSEWDRYCHYVAGLV
GIGLSRLFSASELEDPIVGQDTELANSMGLFLQKTNIIRDYLEDQLEGREFWPREVWSRY
TKKLSDLTKPENIDMAVQCLNELITNALRHVPDVLTYLSRLKNQSVFNFCAIPQVMAIAT
LAACYNNKQVFRGVVKIRKGQAVTLMMDATNMQSVKAIMYQYVEEIYQKIPSTDPSSNKT
QQIIASIRAMSLPSGPMASRHHYSPIYLSCAMLLAALSWQYLSTISKATEEYVQAGEN
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atggagctgctgaggaaatggctggggcaccccgaggacatctaccacctgctgcgcttc
aagatgggcggctaccgcgtcgtcatgccgcggatggacccggactcgctgggactcggg
ctccgcacctgttaccgctacctcaaccagaccagccgtagcttcgccgccgtcatccag
gcgctggatggagagctgcggcatgctgtctgtatattttacctagttctccgtgccctg
gacaccatagaggatgacatgaccatcagcttagacgtaaaggtcccgatgctgattgag
tttcactcttatctctatcaaccggagtggaaatacatggagagcaaggagaagcaccgg
caggtgctggaggacttcccaacaatctccatggagtttaggaacctggcaaaggtctac
caggatgtgatttctgatatttgtcacaagatgggtgttgggatggcggagttcttggaa
aagaaggtggattctcagagtgaatgggatcggtattgccactatgtggctgggctggtg
gggataggcctttcccgactcttctctgcatcagagctggaagatcctattgtaggacag
gacacagagctggcaaactccatgggcctcttcctgcaaaaaaccaacatcatacgtgac
tatctagaagaccagctggaaggaagggagttctggccaagggaggtttggagcagatac
acaaagaagctctctgaccttaccaagccagagaacatagatatggctgtgcagtgtctg
aatgagctcatcaccaacgctctccgccacgtacctgatgtcctcacttacttgtctcgc
ctgaaaaaccaaagtgtcttcaacttctgtgctatcccccaggtgatggctattgccact
cttgctgcctgctataataacaagcaggtgttcagaggggtagtgaagatccggaaggga
caagctgtcactctgatgatggatgccacaaacatgcaatctgtcaaagccatcatgtac
cagtatgtggaagagatctaccagaagatccccagcacggacccttcatccaacaagacg
cagcagatcatcgcctccatccgtgccatgagcctgcccagcggccccatggcctcacgc
catcactattcccccatctacctgtcctgtgccatgctcctggctgctctcagctggcag
tacctcagcaccatctccaaggccaccgaagagtacgtccaggcgggtgagaactga
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