Lagopus muta (rock ptarmigan): 125689800
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Entry
125689800 CDS
T09141
Symbol
SOX7
Name
(RefSeq) transcription factor SOX-7
KO
K09270
transcription factor SOX7/8/10/18 (SOX group E/F)
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lmut03000
]
125689800 (SOX7)
Transcription factors [BR:
lmut03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
125689800 (SOX7)
SSDB
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GFIT
Motif
Pfam:
HMG_box
Sox17_18_mid
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
125689800
NCBI-ProteinID:
XP_048793409
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All DBs
Position
2:4197280..4201026
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AA seq
377 aa
AA seq
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MAALMSTYPWPERLEGGEAEGLQAGPPPRCPPGEKGGESRIRRPMNAFMVWAKDERKRLA
VQNPDLHNAELSKMLGKSWKALSLSQKRPYVEEAERLRVKHMQDYPNYKYRPRRKKQVKR
ICKRVDPGFLLGSLARDQNAVPEKRTCGRAGGEKEGPGEYPPRPGLPPIRGYRDPPGSGS
STSVDAYPYGLPTPPEMSPLDAIDPEQSFFSSPCPEDHHRSHLAGASFSPEYAGSSLPCN
HHPLSPMPQPNSCMIPPASSCPPLPPPPPPSYYTPAFPSLHPTSLHAHLGQLSPPPDHHG
FDTLDQLSQAELLGEMDRNEFDQYLNTPGHSDHHAGGLANGHVPAASTAGSSHAAETSLI
SVLADATATYYNNYSVS
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgttaatgagcacctacccatggccagagaggttggaggggggggaagccgag
gggctgcaagcggggccgcccccaaggtgcccaccgggagagaagggaggcgagagtcgc
atccgccgccccatgaacgctttcatggtgtgggcgaaagacgagaggaaaaggttggcc
gtgcagaaccccgacctgcacaacgcggagctcagcaagatgctcggcaaatcctggaag
gctctgagcctctcacagaagcgaccctatgtggaggaggctgagcggctgcgggtcaaa
cacatgcaagattatcccaactacaagtaccggccgcggaggaagaagcaagtcaagagg
atctgcaagagggtagaccccggttttttgctgggcagcctcgcacgggaccaaaacgcc
gtgcctgagaagcggacctgtggccgggctgggggtgagaaagaggggccgggtgagtat
ccccctcgcccagggctgccgcccatccggggctaccgggatcccccaggcagcggcagc
agcaccagcgtggacgcctacccctatgggctgcccacccctcccgagatgtctccgttg
gacgccatagaccctgaacagagcttcttctcctcaccctgccctgaggatcatcaccgc
tcccacctcgccggagcttccttctccccggagtacgcgggcagctccctcccgtgcaac
caccaccctctcagccccatgccgcagccaaattcctgcatgatccccccggcctccagc
tgtcctccccttcctcctcctcctcctccaagctactacacacccgctttcccctctctg
caccccaccagcctccatgcccacctgggccagctctctccaccgcctgaccaccatggc
tttgataccttggaccagctgagccaagctgagctgttgggggagatggaccgtaatgaa
tttgaccaatatctcaacacccccggccacagcgaccaccatgctggaggcttggccaat
ggacacgtccctgcagcctcaacagctggcagctcccacgctgcagagaccagcctcatc
tccgtccttgccgacgccacggccacctactacaacaactacagcgtctcttag
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