Lagopus muta (rock ptarmigan): 125689929
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Entry
125689929 CDS
T09141
Symbol
SPAST
Name
(RefSeq) spastin isoform X1
KO
K13254
spastin [EC:
5.6.1.1
]
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lmut04131
]
125689929 (SPAST)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lmut04812
]
125689929 (SPAST)
Enzymes [BR:
lmut01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
125689929 (SPAST)
Membrane trafficking [BR:
lmut04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
125689929 (SPAST)
Cytoskeleton proteins [BR:
lmut04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
125689929 (SPAST)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
Vps4_C
AAA_22
AAA_5
TIP49
AAA_16
Mg_chelatase
AAA_14
IstB_IS21
MIT
AAA_24
DUF815
NPHP3_N
nSTAND3
AAA_2
P66_CC
Motif
Other DBs
NCBI-GeneID:
125689929
NCBI-ProteinID:
XP_048793672
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All DBs
Position
2:76783308..76815151
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AA seq
613 aa
AA seq
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MNSPGGRGKKKGSAGSSSAPPAAGAFPSAPSGPAPPAPPAGAAAAAAASPHKRNLYYFSY
PLFAAFALLRFVAFQLGLLVAWLCERLSRGALMAAKSSRAGDAPEPGGAAERVRACHKRA
FECISMALRIDEDETAGQKEQAVEWYKKGIEELERGIAVLVVGQGDQCDRARRLQSKMMT
NLAMAKDRLQLLEKLQADLQISKPQMEVYNDSTNLACRNGHLQSESGAVPKKKDPLTHTS
NSLPRSKTVAKTGSTGLSGHHRTPSYSGISSASVSRPATNPTTSTHKAAPKNSRTNKPST
PTPAARKKKDMKIFRNVDSNLANLILNEIVDSGPAVKFDDIAGQELAKQALQEIVILPSL
RPELFTGLRAPARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVGEGEKLV
RALFAVARELQPSIIFIDEVDSLLCERREGEHDASRRLKTEFLIEFDGVQSSGEDRILVM
GATNRPQELDDAVLRRFTKRVYVSLPNEETRLVLLKNLLSKQGSPLTQKELAQLARMTDG
YSGSDLTALAKDAALGPIRELKPEQVKNMSASEMRNIKLSDFTESLKKIKRSLSPQTLEA
YIRWNKDFGDTTV
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgaattctccgggaggcagagggaagaagaagggctcagccggctccagctccgcgcct
cccgccgccggggccttcccctccgcgccgtccgggccggctccccccgcgccgccggcg
ggggcggcagcggcggcagcggcgtccccgcacaagcggaacctgtactacttctcgtac
ccgctgttcgctgccttcgccctgctccgcttcgtcgccttccagctcgggctgctggtc
gcctggctctgcgagcgtctctcccgcggcgcactcatggccgccaagagcagcagggcc
ggcgatgcgcccgagcccggcggggcggccgagcgggtgcgggcgtgccacaaacgggcc
ttcgagtgcatctccatggcgctgcgcatcgacgaggacgagacagcaggacaaaaggaa
caagctgttgaatggtataagaaaggaattgaagaactggaaagaggaatagctgtctta
gttgttggtcaaggtgatcagtgtgatcgggctcgacgtctgcagtctaaaatgatgaca
aatttggcaatggccaaggatcgcttgcagcttttagagaagctgcaggcagatttgcaa
atttccaagccgcaaatggaggtctataatgacagtactaacctggcatgccgcaatgga
catctccagtcagaaagtggagcagttccaaaaaagaaggatcccttaacacacacaagt
aattcccttccacgttcaaaaacagttgcaaaaactggatccacaggcctttcaggccac
catagaacacctagctacagtgggatatcaagtgcttctgtgtctagaccagcaacaaac
cctacaacttcaactcacaaggctgctcccaaaaatagcagaacaaataagccttctact
cctacccctgctgctcgaaagaagaaagacatgaaaatatttagaaatgtggacagtaat
cttgctaatcttatcctgaatgaaattgttgatagtgggccagctgtcaaatttgatgat
atcgcagggcaggaactggctaaacaagctttgcaagaaattgttatccttccttctctt
agacctgagttatttacaggacttagagctcctgcacgtggattgttgctctttggccca
ccaggaaatgggaagacaatgctggccaaagcagttgctgcagaatcaaatgctactttc
ttcaatatcagtgctgcaagcctaacttcaaaatacgtgggtgaaggtgagaaattggtg
cgtgctctatttgcagtagccagagaactgcagccttctataatttttattgatgaagtt
gatagccttttgtgtgaaagacgagaaggtgaacatgatgctagcaggcgtctaaaaaca
gaattcttaatagaatttgatggtgtgcagtcttctggagaggacagaatacttgtgatg
ggagcaacaaacaggccacaggagcttgatgatgctgttctcagacggttcaccaaacgg
gtatatgtatctttaccaaatgaggaaacgagattggttttgctaaagaatcttctaagc
aaacaaggaagtccgttgacccaaaaagagttggcacagctagcaagaatgacagatgga
tactctggaagtgatttaactgcattagcaaaggatgcagcattgggtcctatccgagaa
ttaaaaccagagcaagtgaagaacatgtctgccagtgagatgagaaatattaaattatca
gatttcactgagtctttgaagaagataaagcgtagtttgagccctcagacactggaagca
tacattcgttggaacaaggactttggagataccacggtgtga
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