Lagopus muta (rock ptarmigan): 125689939
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Entry
125689939 CDS
T09141
Symbol
VSX1
Name
(RefSeq) visual system homeobox 1
KO
K09335
visual system homeobox protein 1
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lmut03000
]
125689939 (VSX1)
Transcription factors [BR:
lmut03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
125689939 (VSX1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
125689939
NCBI-ProteinID:
XP_048793699
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All DBs
Position
2:94236493..94240019
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AA seq
350 aa
AA seq
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MPGRAEPSGGRAAVPVPLPVAVAAAPGPASVRSALPERSARPGGAGLRAKGFAITDLLGL
EAELQPPPGAAPGPAGGYEGGGALGLGLGLLCGLAGPGAPCLLPAPLPLLPARGPRPGAP
GPPSAARRHKENASDEDSLSGDASELKMPASQIKRKKRRHRTVFTAHQLEELEKAFNEAH
YPDVYAREMLAVKTELPEDRIQVWFQNRRAKWRKREKCWGRSSVMAEYGLYGAMVRHSIP
LPESIINSAKSGLVGSCAPWLLGMHKKSMEVSRKAESQEKPTDGWQAEQDGEELQGKQAS
SHRSSEKLGPAKDPEDTAIDLSRTAKQEKRSVLRQCVNGEPATEQKDRDH
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgccgggccgggcggagccgtcggggggccgcgcggcggtgccggtgccgcttcccgtc
gcggtggcggcggccccggggccggcgtcggttcgcagcgccctccccgagcggtcggcg
cgtccgggaggagcggggctgcgggccaagggcttcgccatcaccgacctgctggggctg
gaggccgagctgcagcccccccccggggccgctcccgggcccgccggcggctacgagggc
ggcggggcgctggggctggggctggggctgctgtgcggcttggcggggcccggagctccc
tgccttctgcccgccccgctgccgctgctgcccgcccgcggtccccgcccgggcgcccct
gggccgccgtccgccgcccgccgccacaaggagaatgcctccgatgaggacagcctgtcc
ggggacgccagcgagctgaagatgccggcttcgcagatcaagaggaagaagcggcggcac
aggacggtgttcacggcccatcagctggaggagctggagaaggcgttcaacgaagctcac
tatcccgacgtctacgccagggagatgctggcggtgaagacggagctgcccgaggaccgc
atccaggtttggtttcagaaccgaagagccaagtggcggaagcgggagaagtgctggggc
cggagcagcgtgatggctgagtatgggctgtacggagccatggtgcggcactccatccct
ctgcccgagtccatcatcaactccgccaagagcgggctggtgggatcctgcgccccgtgg
ctgctgggcatgcacaagaagtccatggaggtgagcaggaaggcagagagccaggagaag
ccgacagatggctggcaagcagagcaggatggagaggaacttcaagggaagcaggccagt
tctcacaggagctccgaaaagcttggccctgcgaaagatcctgaagacacagccatcgac
ctctccaggacagccaagcaggagaagaggagcgtactgaggcagtgcgtcaacggggag
cctgccacggagcagaaggacagggaccactga
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