Lagopus muta (rock ptarmigan): 125689950
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Entry
125689950 CDS
T09141
Symbol
NYX
Name
(RefSeq) nyctalopin isoform X1
KO
K08129
nyctalopin
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
lmut00535
]
125689950 (NYX)
Proteoglycans [BR:
lmut00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class IV
125689950 (NYX)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_1
LRR_14
LRR_9
LRRNT
DHU1_N
LRRCT_2
Motif
Other DBs
NCBI-GeneID:
125689950
NCBI-ProteinID:
XP_048793720
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Position
1:complement(111128958..111136595)
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AA seq
475 aa
AA seq
DB search
MGLAHSLLSVILWVPHVHAVWACVRSCPANCVCTQERSCSVLCDRAGLGQIPSEFPCEAS
SINLDKNSIKFLSERAFGTLPSLKSLSLNHNNISFITPGAFKGLPSLTELKMAHNEYIRY
LHTRTFTALRRLVKLDLADCNLFNIPDRIFIELHSLQELFCFQNNFRRIPGAIRGMENLT
HVYLERNRIEAVAYNSLQGLTKLKYLNLQDNRINVVHERAFQGCQKMEYLYLNDNLISEL
PENSFDGLRCLKMLNLGGNFLRNVSNTWFRDLVELEVLYLDRNRINYIEEGAFENLTSLV
SLHLNSNNLTTLPFSVFQPVYFLGRLYLFRNPWECDCRIEWLKEWMENYRLVRDIPCASP
SSVAGIDLMDVLYDRSPEGYCLDPVELNVTSDSPTPSSEPFSTTESKFNSLISKLLLQMG
LPEEVANTTEVFSNATQLDGLTGGVTSGTREDSSKAISFSFHLPTLLTVVIFQSK
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atggggttggcacattccttgctgtcagtgatcctttgggtgccccatgtccacgcggtg
tgggcctgtgtgcggtcctgccctgccaactgtgtgtgcacccaggaacggagctgctct
gtcctctgtgaccgtgctggcctggggcagatccccagtgaattcccctgcgaagcctcc
tctattaacctggacaaaaacagcatcaagttcctctctgagagggcctttggtactttg
ccttcccttaaatccctgtccctcaaccacaacaatatctccttcatcactccgggggct
ttcaaagggctgcccagcctgacagagctgaagatggcccacaacgaatacatccgctac
ctgcacacacggacattcactgctctccggcggctggtcaaattggacctggcggactgc
aacctcttcaatatcccagacaggatcttcattgagctgcactctttgcaggagcttttc
tgcttccagaacaacttccgaaggatcccaggtgccattaggggcatggagaatctgacc
catgtctacctggagagaaacaggatcgaagcggtagcctacaactccctgcaggggctg
accaagctaaaatacttgaatctgcaagacaacaggataaatgttgttcatgaacgagct
tttcagggctgccaaaagatggagtacctgtacctgaatgacaatttgatcagcgagctt
ccagaaaattcctttgatggcctgaggtgcctgaaaatgctcaacctaggggggaatttc
ctcaggaatgtttctaacacttggttcagggacctggtggagctggaggttctctatctg
gaccgcaacaggatcaactacattgaggagggggcttttgagaacctcaccagtctggtc
tccttgcacttgaacagcaacaacctgacgaccctgcccttctctgtcttccagcctgtg
tacttcctgggacggctgtatctcttccgcaacccctgggagtgtgactgccgcatcgaa
tggctgaaggagtggatggagaactacagacttgtcagggacattccctgtgcctccccg
tcctctgtagctgggattgacctaatggacgtgctctacgacagatcaccagaaggttac
tgtcttgaccccgtggagctaaatgtcacatctgacagtccaacccctagcagcgagcct
ttctctaccacagagagcaagttcaacagccttatttctaaactcttgcttcagatgggc
cttcccgaagaggtggcaaacactactgaagtcttcagtaacgctacacaactggatgga
ctcactggtggggttacttctggcacaagggaagacagcagcaaagccatctccttctct
ttccacctcccaacacttcttacagtggttattttccagagcaagtag
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