Lagopus muta (rock ptarmigan): 125690025
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Entry
125690025 CDS
T09141
Symbol
UTP20
Name
(RefSeq) small subunit processome component 20 homolog
KO
K14772
U3 small nucleolar RNA-associated protein 20
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lmut03009
]
125690025 (UTP20)
Ribosome biogenesis [BR:
lmut03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
125690025 (UTP20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP20_N
UTP20
UTP20_C
Motif
Other DBs
NCBI-GeneID:
125690025
NCBI-ProteinID:
XP_048793907
LinkDB
All DBs
Position
1:46874852..46934081
Genome browser
AA seq
2798 aa
AA seq
DB search
MKGKSSAHKSGNTHRFLTFSERLSNVNIDIIHRIDRTGSSAEEVETYFYEGLQKWRELNL
TQHFVQFYKEVANKCQSFNQLVYYQSAIVQSLKTHLQVKASLAYQPLLDLVVQLARDLQA
DFYPHFHDFFMAITKLLDTQDTELLEWAFTSLSYLYKYLWRLMVKDISNIYSLYSTLLAH
HKLHIRNFAAESFVFLMRKVSDKNALFNLMFHDLGEHPKKVEGVGRLLFEMCKGVRNMFH
SCTETALKLILVKLGPVTEEETELPWATIGEAFEQMIRSAAMHMHREHFDVVFKCLKESL
LNLQSKITKVNCCMASEQMERVLRAYLILVEHANGSKISQPEEICQVLIKMLQTPDLLSS
CFKILLKTISALLLAENIHLPDSLTTEAIERVLGSGIEWCFLLDFSEAMFTMKQFERHFL
PCFLKYIEHCFSETDALRKDQATAVLAKLILVKAEPPTVGSMAFEKYPLLFTESSSISSN
TRQQTSKRQGGRAEVPVLDHVLSLIQLQENEDITDLSQPWVALVVLPHIRPMDKEMILPH
VTSFIDSLFTAIDKGSLCKGSLFVACQAVSTLLSLTESSEILHLLPAERVKNLVTTFPSD
PSVLLLADLYYTRLALCGCQEPLSQGNLMDLFEKLQPNISTGISKVRLLTVRILSHFETP
PSTVMEGDGTGDLQSVFAILLQAELVPATVNDYREKLLHLRKLRCDIVLSAIPSGSLQEV
PLRYLLGMLYINFSPLWDPVIELVTSHAKEMENKQFWKVFYEHLERAAAYAEMELQNELD
EQEENINETESKKIPEGGVGTVFLEQLGTRTDCSERLDHTNFRFLLWKALEKFPDRVEPR
SRELSPLLLRFIRNEYYPADSLVAPTQDLRKKTTGTIIAKEVPGEEVNDVNMEEEDEEEK
EEGEPITVGLPKKKTRRAAAKQLIAHLQVFSKFSNPRALYLEQKLNALYTQLLSHQDQSV
QRIALDCIMTYKHPHLLPYRENLQRLLEDKSFKEEIVHFSISEENTIVKMEHRPHLVPVL
MRILYGRMRNKTGNKTQGKSAAATRMSIVLRFLAGSLPEEIRMFLDLLFEAVKQFSHGPC
QTAVLRSMSELDLAKVLPLGRQHSLFNGLEVVLKNMGHLISQYLPEILQILLCMTAVISC
ILQQREKVQPRLINPLKNLRRLGLKLVVEFFSDHEAYSFSVEEIDAVFHAVVWPQVCRLA
SESQYSPTFLLKLIYTWSKNPRYFPLLAKQYPDHPEYDILSNVFAVLSAKNLSEATSNLV
MDIADSLLNSPDFEPTEQVSSLNVTNSVVLNTGEVTEESLSLGCRLVLPHVPAILQYFSK
TMLNVEKMKKKKYRAQVSKELSILSKISKFIQEKSQNSVLVSLLLPFLHQSNIEQDAEID
ILETVQNLLRHCSNPASFLKPLAKLFSVIQNKLSRQKLCLVFQTLSDLDSELKYITDVVK
LNAFDQRHLDDINFDVRLSAFQSITAHIKEMQTVDINFLIPVMHNCFYTIQLGDMALSDN
ASLCLTSFIHRLAEIDHTEDDYKELIQHTLLESLRRGLKSKTESIQQDYTSLLSCLIQTF
PANPEFRDLVQLTNCHDPDMDFFENMKHMQIHRRARALRRLAKQLTEKKLVLSSKSLQNY
IMPYATTAIFSEKMLKHENMVTASVEVVGAICQHLSWSAYLYHLKHFIHVLQTGQISPKL
GVSLLETVLEAFHFDHETLEKQLTTIENQETAAMEPEVEGEEAMELEQSEGEEEVAEEDK
KNIPEEPAEHELVLPEKAAETPENTQQVAKPVSFLPRNKEELECLIKHIQDTVIVNILPK
LHRCIVAKVKRDEEHKLVKSSVVNDDEVVRVPLAFAMVRVMQCLPQEVMEANLPSILLKV
CSFLRNRFQEIRDVARNTLTKIMEVLGVQYLLYVLKEMQSTLIHGYQLHVLTFTVNLLLK
GLTSRLNAGDLDPCLDILIEIFNQELFGDVAEEKEVKGIVSKVMEARKNKSYDSYEILGK
YIGKGQVTKLILPLKEILESTTSLKIVRKVHEALRHIMAGLIFNSDMNAESLLLLSHGLI
SENLPLLTEKAKTKVAPPPDPRLQPESCLLLQPTPTRGGQKAPVSRRTNTYILVESGLRL
LHMSLKRSKVNSSDEHILEMLDPFVQLLIDCLKSMDVKVITGALQSLVWILKFPLPSINT
NLESLIKQLFLLLKEFAKTGVAKGQNFHLVVNCFKSVTILVKNAKSQITSKQLQVLLGFA
EEDIYDSSRQATAFGLLKAILSRKLIVPEIDDVMQKVAQLAITGQTEPVRVQCRQIYLKY
ILDYPLGDKLKPNLDFMLAQLDYEYETGRESALEMIVYLLDMFPQELLHKYCGLFFISLC
MMMINDDSAKCKKMAALTCKSLLSKINNDKQDLLFSLVTEWFHSKKSSHRRLAAQACGLF
VEVEGVMFERRLEAVLTLVEKEINPVQFEGITEEEEEKAADRLLFSFLVLVTKLISECSF
IQLTKHADIVSQIWDHIQSHLWHPHSWVWLTATQIFGLLFASHKPEDLVTKWSERQAVKR
KKPSAELSASTFFLTAELDRKVKELVFAFCHQLRSKFLDQSLGEQVIKNLLFVAKVIYLL
APPSEEGDQAEGELGCEVEEQEASEDEEEKDVSAQGEGEGEDTEEKGRPVTLIWLMKKLS
IMAKREAAYSPKIPLKRSCIFKFLGAISVDMGKDRIKPYLATVLTPLYRELNSTYAEQDP
TLKNLSQEIIELLKKLVGLEAFSLAFSSVQKQANQKRAMRKKQRALQTVANPDIAARRKL
KRHKNKAETRKRKIEFLRPSYKAKKHRSHALKDLAMVE
NT seq
8397 nt
NT seq
+upstream
nt +downstream
nt
atgaagggcaaatcctcggcccacaagtcggggaacacgcaccggtttcttaccttctcg
gaacgcttaagtaatgttaatatcgatattattcatcggattgacagaactggaagcagt
gctgaggaggttgaaacctacttttatgaaggactacagaaatggagggaactgaacctc
actcagcattttgtgcaattctacaaagaagtggccaacaaatgccagtccttcaaccag
ctggtctattaccagagtgccattgtgcagagcttgaagacacatttgcaagtcaaagcc
agtcttgcttatcaaccgttattagatctagtggtgcagttggctcgagatctccaggct
gatttctatcctcacttccatgacttcttcatggccatcaccaagttgttggatacacag
gacacagaactgctggaatgggcgtttacctctctttcctatctctacaagtacctgtgg
agattgatggtgaaggacataagcaacatatatagcctttacagcaccctgctggctcat
cacaagcttcacatcagaaactttgctgctgaaagttttgtctttttaatgagaaaggtt
tctgataaaaatgccctcttcaacttaatgttccatgacctgggggagcaccccaagaag
gtggaaggtgtgggacggctactttttgagatgtgcaagggtgttcgaaacatgtttcac
tcttgcacagagacggctctaaaactaattctggtaaagctgggacctgttactgaagag
gaaactgaactaccatgggcaacaattggagaagcctttgagcagatgatcagatcagct
gcaatgcatatgcatagggagcattttgacgttgttttcaagtgcctgaaggagtcactc
ttaaacttgcagagcaaaataactaaagtcaactgctgcatggcttcagagcagatggaa
agggttctgcgagcatatctgatcctagtggaacatgcaaatggatccaaaatctcacag
ccagaagaaatctgtcaggttttaataaaaatgttacagacaccagatctcttgtcatct
tgcttcaagatcctgctgaaaaccatttctgcgttactgctggccgaaaacattcactta
cctgactctttgaccacagaagccattgaaagggtattaggaagtggaattgaatggtgc
tttcttttggacttctctgaagcaatgttcacaatgaagcaatttgagaggcactttctt
ccatgctttctaaagtacattgaacattgcttctctgaaacagatgcacttagaaaggat
caggcaacagcagttctggctaaactcattctagtgaaagcagagcctcctacagttggt
tcaatggcatttgaaaagtatcctcttcttttcaccgaatcatcatccatcagctctaat
acaagacaacaaacaagtaaaagacaaggaggaagggcagaagtaccagtgcttgatcat
gtgctgtctctaatccagttacaagagaatgaagacatcactgacctttcacagccttgg
gttgccttggttgtactgccacatattagaccaatggacaaagaaatgattctgccccat
gtgacaagttttatagattctctgttcacagccattgacaaaggaagcctctgcaaagga
agcttgtttgtggcctgccaagctgtaagtactcttctcagtttgacagagtcttctgaa
atactgcatttgttgccagcggagcgtgtcaagaacttggtgaccactttcccttcagac
ccatcagtgttgctgctggctgatctctattacacaagactggcattgtgcggctgccag
gaacctctttcccaagggaacctaatggacttgtttgagaagttgcagcctaatatctcc
actggtatttccaaggtccgactcttaactgtccgtattctaagccactttgagactcca
ccttctacggtgatggagggtgatggtacaggggacctccaatcagtatttgccatactg
ctccaagcagagcttgtaccagcgacggtgaatgattacagagagaaacttctccatttg
aggaagctgagatgtgatatagtgctgtctgcaataccaagtggatctttgcaggaggtg
cctcttcggtatttactgggaatgctttatattaacttcagccctctctgggatcctgta
attgaacttgtaacttctcatgcaaaggaaatggagaataaacagttctggaaggtcttt
tatgaacatctggagagggctgctgcctatgctgaaatggaactgcaaaatgaattggat
gaacaggaggaaaatatcaatgaaactgaaagcaagaagataccagaaggaggggtgggc
actgttttcctggagcagctggggacaagaacagactgcagcgagcggttggaccacaca
aacttccgctttctgctgtggaaagcgttagagaagttcccagacagggtggagcccagg
tcaagggaactttccccgcttcttctgaggttcattagaaatgaatactacccagcagat
tcattagtggctccaactcaggatcttagaaagaaaactactggtacaatcatagcaaaa
gaagtaccaggtgaagaagttaacgatgttaatatggaggaagaggacgaggaagaaaag
gaagaaggagaaccgattactgtagggcttccaaaaaagaaaacaagaagagctgctgct
aagcaactgatagctcacttacaagttttctctaagttctccaatcctcgtgcgttgtat
ctggagcagaagttaaatgcattgtatacccagttactgtctcatcaagatcagagtgtg
cagagaatagctcttgactgtatcatgacatacaagcatcctcatctactgccatacagg
gagaacttgcaaagactgctggaggacaagagctttaaagaagaaatagtccatttcagt
atttctgaggagaacacgattgtaaaaatggagcatcgaccacatcttgtccctgttctg
atgagaattctttatggcaggatgagaaacaaaacagggaacaaaacacagggcaagtcc
gcagcagccactcgcatgtccatcgttctgcgatttctggccggctcactgccagaagag
atccggatgttcttggatctgctctttgaagctgtgaagcaattcagccatgggccttgc
cagacagcagtgcttcgaagtatgtcagagttggatttagctaaagtcctgcctcttggg
cgtcagcacagcctcttcaatggtcttgaagttgtgttgaaaaacatgggacatttgatc
agtcagtacttgcctgaaattctgcaaattctgctctgcatgacagctgtgatatcctgc
attctccagcaaagagaaaaggttcaaccacggttgattaatccactgaagaacttgagg
cgccttggactcaagcttgtggttgagtttttttctgatcatgaggcctacagttttagt
gtggaagagattgatgcagttttccatgcagtggtatggcctcaggtttgcaggttggct
tcagagagccagtattctccgacttttctgctcaaactcatttacacctggagtaagaat
cctagatatttccccctactggccaagcagtatccggatcatccagagtatgatatactg
tcaaatgtgtttgctgtcctgtcagccaagaatctgtctgaggcaacatccaatcttgtg
atggacattgctgatagccttctcaacagccctgattttgaaccaacggagcaggtttcc
agtttgaacgtgaccaactctgttgtcctaaacactggagaagtgacagaagagtccctc
agcctaggttgtcgcttggtcctacctcacgttcctgccatacttcagtacttcagcaaa
acaatgttaaacgtggagaaaatgaaaaagaagaagtacagagcccaagtcagcaaagag
ctgagtatactctccaagatcagcaaatttatacaagaaaaaagtcagaattcagtgctt
gtgagtctcctcctccctttccttcaccagagtaacattgaacaagatgcagagattgac
attttggagacagtgcagaacttgctgagacattgctcaaaccctgcaagttttctcaaa
cctctggcaaagctgttttctgtcatccagaataaactgtctcgacagaagttgtgcttg
gtatttcagactttatctgatttggacagtgaattgaaatacattacagatgttgttaag
ttgaatgcttttgatcaacggcatcttgatgatatcaacttcgatgtacgcctgtcagct
ttccagtcaatcactgcccacatcaaagaaatgcaaacagtggatatcaacttcctcatc
cctgttatgcacaactgcttctataccatccagctaggagatatggctcttagtgacaac
gcaagcctttgcctcaccagttttatccaccgcctggcagaaatcgaccacacagaagat
gactacaaggagctaatccagcacactcttctggagtctctgagaagggggctgaagagt
aagactgagagcatccagcaagactacacgtctttgctttcctgcctcattcagacattc
ccagcaaatcctgaattccgggatttggtccagctgaccaactgccatgatcctgacatg
gacttctttgagaacatgaaacacatgcagatccacaggagggcacgagctctgaggaga
ctggctaagcagctgactgagaagaaacttgtgctgtcttccaaatccctgcagaactac
atcatgccttatgctactactgccatttttagtgaaaaaatgctgaagcatgaaaatatg
gtaacagcctctgttgaagttgttggagccatctgccagcatctctcgtggtcagcatac
ttgtaccacttaaagcatttcatccatgtcctgcagacggggcagatcagtcccaagttg
ggagtcagcttgttagagacagtgctggaagcctttcactttgaccatgaaacactggaa
aaacagctcacgaccattgagaaccaagaaactgctgccatggagccagaggtagaaggt
gaagaagccatggagctggaacagagtgaaggggaagaggaagtggctgaggaagacaag
aagaatatccctgaagaaccagcagaacatgagctggttctgcctgaaaaggcagctgag
acacctgaaaacactcagcaagtggcaaaaccagtttctttcttaccccgaaataaagaa
gagctggagtgtctgatcaaacacattcaagatacagttatagttaacattttgcctaaa
ttgcacagatgcatcgtagcgaaggttaaaagagatgaagaacacaagcttgtgaaatcc
agtgttgtgaatgatgatgaggtagtccgtgtgcctttggcttttgcaatggtcagggtg
atgcagtgtcttccccaagaagtgatggaagccaacctgccaagcatcctcctgaaggtt
tgctcatttctgagaaacagatttcaggaaatccgggatgttgctcgtaacaccctcact
aaaatcatggaagtcttgggagtacaataccttctgtacgttttaaaagagatgcagtca
actctcatccatgggtaccagctccatgtgctgactttcactgtgaatctgctactgaag
ggtcttactagcaggctgaatgctggtgatttggacccctgcttagacatcctgattgag
attttcaaccaagagctgtttggggatgtagctgaagagaaggaagtaaagggaatagtc
tccaaggtcatggaagcacgcaagaacaagagttacgattcctacgaaattcttggaaaa
tacataggaaagggccaggtgacgaaacttattctgccactgaaagagattctggagagc
accacgagcttgaagatagtccgaaaggtgcacgaggcgctgcgtcacatcatggcaggg
ctgatcttcaactcggatatgaatgctgaatctctcctcctcctcagccatggtctcatc
agtgaaaacttgcctctgctcactgagaaggccaaaacaaaagttgcccctcctccagat
cctcggctgcaaccagagagctgcctgctgctccaacccacacccacaagaggggggcag
aaagcccctgtcagcagaaggaccaacacatacatcttggttgaatcaggacttcggctg
ctacacatgagcctgaagagatccaaagtaaattcttctgatgaacacattttggaaatg
ttggacccctttgttcagctactcatagactgcctgaaatccatggatgtcaaggtgata
actggtgctctgcagtccttagtatggattttaaagttccctttgccttctatcaataca
aatctggagtcgctaatcaagcagcttttcctcttgctgaaagaatttgccaagacagga
gtagccaaaggccagaattttcacttggttgtgaactgtttcaaatccgtaacaatactt
gtgaagaatgcaaagagccaaataacaagcaaacagctccaagtgctgcttggctttgct
gaagaagatatttatgattcatcacggcaagccactgcctttggccttctaaaggctatt
ttatccaggaagctgattgtccctgagattgatgatgtgatgcaaaaggttgcccagctt
gccatcacaggccagactgagccagtgcgagtccagtgcaggcagatttacttgaagtat
attctggactaccctcttggtgacaagctgaaacccaatttggatttcatgctcgcacag
ctggactacgagtatgaaactggaagagagtctgctctggagatgattgtgtacctcctt
gacatgtttccacaggagctcctccacaagtactgtgggctgtttttcatttccttgtgt
atgatgatgataaatgatgactcggccaagtgcaaaaagatggcggctttgacgtgcaag
tctctgctcagtaagataaacaacgataaacaagatctgctgttttcactggtcacagag
tggtttcacagcaagaagagctcacaccggaggctggctgcccaggcatgcggcttgttt
gtggaagtggagggagtcatgtttgagcggcgccttgaagctgtcctcaccttggttgag
aaagaaatcaacccagttcagtttgaaggcataactgaggaggaagaggagaaggctgca
gataggctgctgttcagcttccttgtgctggtgacaaagctgatctccgagtgcagcttc
attcagctaaccaagcatgcagacatcgtcagccagatctgggatcatatccagtctcac
ctctggcatcctcacagctgggtgtggctgacagccactcagatatttggcttgttgttt
gcatcccacaaaccagaagaccttgtcaccaaatggagtgaaaggcaggcagtgaagagg
aaaaagccgtcagcagagctgtctgcatccacattcttcctgactgctgagttggacaga
aaggtgaaggaacttgtgtttgcattctgccatcagctgcgctccaagttcctggaccag
tctctgggagagcaggttataaagaatttgctgtttgttgccaaagttatttacttgctt
gcacctccctcggaggaaggtgaccaggccgaaggagaacttggctgtgaggtggaagag
caggaggcttctgaagatgaggaagagaaagatgtttctgctcaaggagagggagaagga
gaggacacagaagagaagggtcggccagtcactttgatatggctgatgaagaagctctct
ataatggcaaagcgagaagcagcatattcccccaagatcccattaaagaggagctgcatc
tttaagttcctcggagcaatctcagtggatatggggaaagacagaatcaagccgtacctt
gcaacagtcctcactcctctgtacagggagctgaacagcacctatgcagagcaagatcca
acactgaagaacctttcccaagaaattatagaactgctcaagaaattagtcggtctggag
gctttttcgcttgctttttcttctgtgcagaaacaggccaatcagaaaagagctatgagg
aaaaagcagagggctttgcagactgtggcaaaccctgacattgctgcaaggaggaagctg
aagagacacaagaataaagcagaaacaaggaagagaaaaatagaattcctgcgccccagc
tataaggccaagaaacatcgcagtcatgcactcaaagacttagcaatggtggaatga
DBGET
integrated database retrieval system
