KEGG   Lagopus muta (rock ptarmigan): 125690133
Entry
125690133         CDS       T09141                                 
Name
(RefSeq) TATA-box-binding protein
  KO
K03120  transcription initiation factor TFIID TATA-box-binding protein
Organism
lmut  Lagopus muta (rock ptarmigan)
Pathway
lmut03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:lmut00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    125690133
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:lmut03000]
    125690133
   03021 Transcription machinery [BR:lmut03021]
    125690133
Transcription factors [BR:lmut03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   TATA-binding proteins
    125690133
Transcription machinery [BR:lmut03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     125690133
  RNA polymerase III system
    TFIIIB
     125690133
  RNA polymerase I system
    SL1/TIF-1B
     125690133
SSDB
Motif
Pfam: TBP TFIIA
Other DBs
NCBI-GeneID: 125690133
NCBI-ProteinID: XP_048794131
LinkDB
Position
2:69687727..69698148
AA seq 302 aa
MDQNNSLPPYAQGLASPQGAMTPGIPIFSPMMPYGTGLTPQPVQSTNSLSILEEQQRQQQ
QQQAAQQSTSQQATQGTSGQTPQLFHSQTLTTAPLPGTTPLYPSPMTPMTPITPATPASE
SSGIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSG
KMVCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTH
QQFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGFRK
TT
NT seq 909 nt   +upstreamnt  +downstreamnt
atggatcagaacaacagcttgccaccctacgctcaaggcttagcctcccctcagggtgca
atgactcctggaattccaatttttagcccaatgatgccatacggcacaggactgacacca
cagcctgtccagagcaccaacagtctgtccatccttgaggaacagcagcggcagcagcag
cagcaacaggcagcacagcagtctacatcacagcaagcgacacagggaacatctggtcaa
actccccagctcttccactcacagactcttaccacagcccctttaccaggaaccacgcct
ctgtacccctccccaatgactccgatgactcctataactcctgcaacaccggcatctgag
agctctgggatagtgccacagctacagaatattgtgtccacggtgaatctgggttgcaaa
cttgacctaaaaaccattgctcttcgtgcccgaaatgctgaatataatcccaagcgtttt
gctgctgttattatgagaataagagaaccacgtactactgcgcttatattcagctctgga
aagatggtgtgcacaggagcaaaaagcgaagaacagtccagactggcagcaaggaagtac
gcaagagttgttcagaaactgggttttcctgcaaaatttttggattttaaaattcagaac
atggtgggcagctgtgatgtgaaatttcctatcagattagaaggattggtactcacacac
cagcagttcagcagctacgagccggaattgtttcctggcttaatctacagaatgatcaag
ccaagaattgttctgcttatttttgtttctggaaaagtggttttaactggtgctaaagtt
cgagcagaaatctacgaagcatttgaaaacatctatcctattttaaagggtttccggaag
acaacgtaa

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