Lagopus muta (rock ptarmigan): 125690133
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Entry
125690133 CDS
T09141
Name
(RefSeq) TATA-box-binding protein
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
125690133
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lmut03000
]
125690133
03021 Transcription machinery [BR:
lmut03021
]
125690133
Transcription factors [BR:
lmut03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
125690133
Transcription machinery [BR:
lmut03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
125690133
RNA polymerase III system
TFIIIB
125690133
RNA polymerase I system
SL1/TIF-1B
125690133
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
TFIIA
Motif
Other DBs
NCBI-GeneID:
125690133
NCBI-ProteinID:
XP_048794131
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All DBs
Position
2:69687727..69698148
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AA seq
302 aa
AA seq
DB search
MDQNNSLPPYAQGLASPQGAMTPGIPIFSPMMPYGTGLTPQPVQSTNSLSILEEQQRQQQ
QQQAAQQSTSQQATQGTSGQTPQLFHSQTLTTAPLPGTTPLYPSPMTPMTPITPATPASE
SSGIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSG
KMVCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTH
QQFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGFRK
TT
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atggatcagaacaacagcttgccaccctacgctcaaggcttagcctcccctcagggtgca
atgactcctggaattccaatttttagcccaatgatgccatacggcacaggactgacacca
cagcctgtccagagcaccaacagtctgtccatccttgaggaacagcagcggcagcagcag
cagcaacaggcagcacagcagtctacatcacagcaagcgacacagggaacatctggtcaa
actccccagctcttccactcacagactcttaccacagcccctttaccaggaaccacgcct
ctgtacccctccccaatgactccgatgactcctataactcctgcaacaccggcatctgag
agctctgggatagtgccacagctacagaatattgtgtccacggtgaatctgggttgcaaa
cttgacctaaaaaccattgctcttcgtgcccgaaatgctgaatataatcccaagcgtttt
gctgctgttattatgagaataagagaaccacgtactactgcgcttatattcagctctgga
aagatggtgtgcacaggagcaaaaagcgaagaacagtccagactggcagcaaggaagtac
gcaagagttgttcagaaactgggttttcctgcaaaatttttggattttaaaattcagaac
atggtgggcagctgtgatgtgaaatttcctatcagattagaaggattggtactcacacac
cagcagttcagcagctacgagccggaattgtttcctggcttaatctacagaatgatcaag
ccaagaattgttctgcttatttttgtttctggaaaagtggttttaactggtgctaaagtt
cgagcagaaatctacgaagcatttgaaaacatctatcctattttaaagggtttccggaag
acaacgtaa
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