Lagopus muta (rock ptarmigan): 125690144
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Entry
125690144 CDS
T09141
Symbol
RIMS1
Name
(RefSeq) regulating synaptic membrane exocytosis protein 1 isoform X1
KO
K15291
regulating synaptic membrane exocytosis protein 1
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lmut04131
]
125690144 (RIMS1)
Membrane trafficking [BR:
lmut04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
125690144 (RIMS1)
Small GTPases and associated proteins
Rab associated proteins
125690144 (RIMS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
RIM2a_ZnF
FYVE_2
PDZ
PDZ_6
Zn_ribbon_Nudix
Motif
Other DBs
NCBI-GeneID:
125690144
NCBI-ProteinID:
XP_048794150
LinkDB
All DBs
Position
2:28727770..29020095
Genome browser
AA seq
1678 aa
AA seq
DB search
MSSSAGPRGPRPPTVPPPMQELPDLSHLTEEERNIIMAVMDRQKEEEEKEEAMLKRLHQQ
FESYKEQVRKIGEEARRYQGEHKDDAPTCGICHKTKFADGCGHLCSYCRTKFCARCGGRV
SLRSNNEDKVVMWVCNLCRKQQEILTKSGAWFFGSGPQPSPSQDGTLSDTATGASSDAPR
EKKARLQERSRSQTPLSTAAASSQEISPSTVQSDQRKGAEVSQPAMGLEQKQVSSRSRSE
PPRERKKTLVSDQNGKVVKGERKRVPKPSLQKEGPAGDRERKERHENRRLEKGKSQDYPD
LPEKLEEGKVPDDEKQRKEDEYHTRYRSDPNLARYPVKPHPEEQQMRMHAKVSKARHERR
HSDVALPHTEMEEAEVPENNLGKRSQLQGTQDRKSLVETQRSYSIDRTGDVRISVSKQLT
NHSPPTPRHSPVPIEHVEYKNHDTFKKQSRLDPSSAILMRKAKREKMETMLRNDSLSSDQ
SESVRPSPPKPHRAKRGGKKRQMSVSSSEEEGASTPEYTSCEDVEIESESVSEKGDLDYY
WLDPATWHSRETSPISSHPVTWQPSKEGDRLIGRVILNKRTTMPKESGALLGLKVVGGKM
TELGRLGAFITKVKKGSLADVVGHLRAGDEVLEWNGKPLPGATNEEVYNIILESKSEPQV
EIIVSRPIGDIPRIPESSHPPLESSSSSFESQKMERPSISVISPTSPGALRDAPQVLPGQ
LSVKLWYDKVGHQLIVNVLQATDLPPRVDGRPRNPYVKMYFLPDRSDKSKRRTKTVKKSL
EPKWNQTFLYSHVHRRDFRERMLEITVWDQPRVQEEESEFLGEILIELETALLDDEPHWY
KLQTHDESSLPLPQPSPFMPRRHVHGGESSSKKLQRSRPISDSDISDYDVDDGIGVVPPV
GYRSSTRESRSTTLTVPEQQRTTHHRSRSVSPHRGDDQGRTRSRLPNVPSQRSLDEIHQM
RRSRSPTRHHEASRSPADYRSRDMDSQYLSDQESELLMLPRAKRGRSAECLHTISSTLPA
CAKTKSVVRQDISLLRDCLNSRIPKFGDDLLVSELQPSLDRARSASTNCLRPDTSLHSPE
RERGRWSPSLERRRPTSPRIHIQHASPEDDRTRTLESCIPKQDSVDHLSAKPGAAQRQSR
KVERYSSQKQARKGSAAETERGLLPCLSRRGFPAPRTTEQPVIRGKHHARSRSSEHSSVR
ALCSVHHLAPGGSAPPSPLLTRIHQQGSPTQSPPADTSFSSRRGRQLPQVPVRSGSIEQE
QENYYSSTKASLVVEERTRQMKMKVHRYNQTSGSGSSQEHEREQYTKYNIQTDQYRSCDN
VSAKSSDSDVSDVSAISRTSSASRLSSTSFMSEQSERPRGRISTFTPKMQGRRMGTSGRI
TKSTSVSGEMYKLEHNDGSQSDTAVGMVGTGGKKRRSSLSAKVVAIVSRRSRSTSQLSQT
EAGNKKLKSTIQRSTETGMAAEMRSRMVRQPSRESTDGSINSYSSEGNLIFPGVRLGADS
QFSDFLDGLGPAQLVGRQTLATPAMGDIQIGMVDKKGQLEVEVIRARGLTQKPGSKSTPA
PYVKVYLLENGACIAKKKTRIARKTLDPLYQQTLVFDESPQGKVLQVIVWGDYGRMDHKC
FMGVAQILLEELDLSSVVIGWYKLFPPSSLVDPTLTPLTRRASQSSLESSTGPPCIRS
NT seq
5037 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcttcggcggggccccgcggccctcgaccacccacggtgccccccccgatgcag
gagctgcccgacctgagccacctgacagaggaagagaggaacattatcatggcagtgatg
gaccggcagaaagaggaggaagagaaggaagaggccatgctcaagaggttgcatcaacaa
tttgaaagctataaagagcaagtaagaaagataggggaagaagcccgccgttaccaggga
gagcacaaggatgatgctccaacatgtggaatctgtcataaaacaaagtttgcagatggt
tgtggccatttatgctcttattgccggaccaagttttgtgctcgatgtggaggtcgtgtc
tctctgcgatcaaacaatgaggacaaagtggttatgtgggtatgcaatttatgtcgaaag
caacaagaaatcttaacaaaatccggagcgtggttttttggaagtggaccacagccatca
cccagccaggatggaacactgagtgatacggcaactggtgcaagctctgatgcaccgaga
gaaaagaaagccaggcttcaagagaggtcaagatcacagactcctttaagcacagcagct
gcctcatcacaggagatctctccttccactgttcaatccgatcagaggaaaggagctgaa
gtatcgcagccagctatgggcctggagcaaaagcaagtttcatcaaggtctagaagtgag
cctccaagagagaggaagaagacgttggtttcagaccagaatggcaaagttgtaaagggt
gagcgtaagcgtgtgccaaaaccctcacttcaaaaagaaggaccagcaggtgatagggaa
cgtaaagaaaggcatgaaaatagaagactggaaaaagggaagtcacaagactatcccgac
ttgccagaaaaacttgaggaaggcaaagtgcctgatgatgaaaaacaaaggaaggaagat
gaatatcatactcggtacaggagtgaccccaatctggcaagataccctgttaaaccacat
cctgaggaacagcaaatgcgcatgcatgccaaggtttctaaagcacggcatgagagaaga
cacagtgatgtagctttgccacacacagaaatggaggaagcggaggtacctgagaataac
ttaggaaaacgctcacaattacagggaactcaggacagaaaatctcttgtggaaactcag
aggtcgtactctatagacagaacaggtgatgtaagaatttctgtttctaaacaattaact
aatcatagtccaccaactcccaggcatagtccagttcccatagaacacgtagaatacaag
aaccacgatacctttaaaaaacagagccgccttgatcctagctctgctattctcatgcga
aaagcaaagcgggagaaaatggagaccatgctaaggaatgattcccttagctctgaccag
tcggaatcagtgcggccatcccctccaaagcctcatagagcaaaaagaggcggaaagaaa
aggcagatgtcagttagtagctcagaggaagaaggggcatcaacaccagaatatactagc
tgtgaagatgtggagatagaaagtgaaagtgtcagtgaaaaaggtgacttggattattac
tggctggatcctgccacgtggcacagcagggagacatctcctattagttcgcatccagta
acgtggcagccttctaaagagggagatcgcttaattgggcgtgttattcttaacaagaga
acaaccatgccaaaagaatcaggtgcattactggggctaaaagttgttggaggaaaaatg
acagaattaggacgactcggtgccttcattaccaaagtgaagaaaggtagcttggctgat
gtggtggggcatctcagagcaggagatgaagttctagaatggaatggtaaacccttgcct
ggagctacaaatgaagaagtttacaacattattttagaatcaaagtcagaacctcaagtt
gaaattattgtttcaaggcctattggtgatattcctcggattcctgagagttctcatccc
ccattagagtccagttcaagttcttttgaatctcagaagatggaaagaccttctatttct
gttatttctccaaccagccctggagccctacgggatgcaccacaagtcctaccagggcag
ctttctgtgaaactgtggtatgacaaggtgggacatcagttaatagtgaatgttctacaa
gcaacagatttgccaccaagagtagatggacggccaaggaatccctatgtaaaaatgtat
tttcttccagacaggagtgataaaagtaaaaggaggaccaaaacagtaaagaaaagtcta
gagccaaaatggaaccaaacttttctctactcgcatgtccatcgtagagattttagagaa
cgaatgcttgaaataacagtatgggatcagccaagagtccaagaagaagagagtgaattt
cttggagagattctaatagagctggagacagcgcttttagatgatgaaccacattggtat
aagctacagacacatgatgaatcttcactacctctgcctcagccatcacctttcatgccc
agaagacatgttcatggtggagaaagctctagcaaaaaattacagagatctcggccaatc
agtgatagtgacatctcagattatgatgttgatgatggtattggagttgttcctccagta
ggttatagatctagcactagagaaagtagatctacaacactaactgtgccagaacagcaa
agaacaacacatcatcgttcacgatctgtatctcctcaccgtggcgacgatcagggcagg
acccgttcacgtttaccaaatgtgccatcacagaggagtttagatgaaattcatcaaatg
agaagatcacgttctccaactagacaccatgaggcctccagaagtccagctgattacaga
tccagagacatggatagtcagtatttgtctgatcaagaaagtgagcttcttatgctgccc
agagcaaaacgaggaagaagtgctgagtgcctacataccatcagctcaactcttcctgca
tgtgctaagaccaaatcagtggttagacaggatatttctctccttcgtgattgccttaat
tcacgaattccgaaatttggagatgatctactggttagtgaactacagccctcccttgac
agggctaggagtgctagtaccaactgcttgagaccagatactagtttgcattcaccagaa
cgagaaaggggtagatggtccccctccctagagaggagacgacctactagtcccaggatt
catatccagcatgcatctccggaggatgacagaacaaggacgctggagtcttgcattcca
aaacaggacagtgtagaccacctaagtgctaaacctggagcagcacagaggcagtccaga
aaagtggaaagatatagcagccaaaaacaagctaggaaaggctccgcagctgaaacagaa
aggggtctgctaccatgtctttctagaaggggatttccagccccacgaacaactgaacag
ccagtcattaggggaaaacatcacgctcgctccaggtcgagtgagcactctagtgtcaga
gccttatgctctgtgcatcaccttgcgcccggaggctcggctccaccttctccacttctg
acaagaatacatcaacaaggaagtcccacccagtctcctcctgcagacacatccttcagc
agtcgcaggggaagacagctgccgcaagttccagtaagaagtggcagtatagagcaagaa
caagagaattattactcttccacaaaagcaagcttagtagtggaggagcgaacaaggcag
atgaaaatgaaagtgcaccgttataatcagacgtcagggtctggttctagtcaagaacat
gagcgtgagcaatataccaagtataacatacaaacagatcagtacagaagttgtgataac
gtctctgccaaatcatcagatagtgatgtcagtgacgtatcagccatttcgcgaaccagc
agtgcctcacgcctcagcagcacaagttttatgtcagagcaatctgaacgccctcggggc
agaatcagtacatttactcctaaaatgcaaggcagacggatggggacttcagggagaatc
actaagagcacaagtgtgagcggagagatgtataagctggagcacaatgatgggagtcag
tcggacacggctgtcggcatggttggaacaggtgggaagaaaaggcgttccagtcttagt
gccaaagtggttgccatagtgtctcgaaggagcagaagcacatctcaacttagccaaaca
gaggctggcaataagaagctaaagagcacgatacaaagaagcacagagacaggaatggct
gcagaaatgagaagtcgtatggttcgacagccaagtcgagaatccactgatggcagcata
aatagttacagctctgagggcaacttaatatttcctggggtacggctgggcgctgacagt
cagttcagtgatttccttgatggacttggacctgcacaattagtaggccgacaaacacta
gcaactcctgccatgggtgatatccagattggcatggtggataagaagggccagttagaa
gtagaagtcattagagcccgtggcctcacacaaaaacctggctccaaatctaccccagct
ccatatgtcaaagtttatttattggaaaatggagcatgtatagcaaagaagaagacaaga
attgcacggaagacccttgatcctttgtaccaacagacactagtttttgatgaaagtcca
cagggtaaagtccttcaggtaatagtctggggagactatggccgaatggatcacaaatgc
ttcatgggtgttgcccagatccttctggaggaattggatctgtccagtgtggtaataggc
tggtataaattattcccaccttcatcactagtggatccaaccttgactcccttgacacgc
agagcttcccagtcgtctctggaaagttcaactgggcctccctgcattaggtcatag
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