Lagopus muta (rock ptarmigan): 125690196
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Entry
125690196 CDS
T09141
Symbol
SMC6
Name
(RefSeq) structural maintenance of chromosomes protein 6
KO
K22804
structural maintenance of chromosomes protein 6
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lmut03400
]
125690196 (SMC6)
DNA repair and recombination proteins [BR:
lmut03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
125690196 (SMC6)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_21
AAA_29
VP9
AAA_15
Motif
Other DBs
NCBI-GeneID:
125690196
NCBI-ProteinID:
XP_048794301
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Position
2:10850187..10880560
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AA seq
1097 aa
AA seq
DB search
MGKRKEESVSKPPSHKRQRQEHTGEHSDESSDEENSLFSADNSCFSLTSTVGEAGIIESI
QLRNFMCHSMLGPFQFGSNLNFIIGNNGSGKSSVLTALIVGLGGKATATNRGSSLKLFVK
SGETSADISVTLQNQGRDAFKPELYGDSIIVNTHINLEGSRTYRLKSKSGAVISSKKEEL
LGMLDHFNIQVENPVSVLTQEMSKLFLQSKNEGDKYKFFMKATQLEQMKEDYSYIMKTKE
NTRLQIEQGVERLKELKRIYCEEKERYESIECVNEMQKRLEELKHKMAWAVVAEMEREIQ
PIREGIKAEEGNTEKFDQKLEECQIKVNEAEEKCKAIQEQLITVNSEAEALHTQCMSSKA
EVQTRRKAVNEAEVLYNRVRTELKRLAKDDEQLHNRIEEMKKSAYQASEPERLEKQRKIT
QLKEKLKALHDEEIMIGQQMHQFQQAIYKHKEEFAKLKREDSDVRQDLDAKQKHLRELRD
SKTNAFKRFGQHMPSLLEEVEIAFRQGQFKHKPVGPLGAFIHPKDPELSLAIEACLKTLV
QAFCCDNHSDERILQQLMSKYYPRGARPSIIVNKFHDKIYDVRHSAVHHPEFPSVLTALE
IDGAAVANCLINVRSIEKVLLIKSSYKAREVMQSNNPPKNCREAFTAEGDQVFNRRYYSS
DYLRPKYLSKDVEAEISLLENEIASRKAQLAASQQRLSSTEKEIEQNESHLHHHRQHQKE
LQIKMRRTAAEIADLENVDEIQYMDIRVLEDVAEENKKKMESVRQEMQEESRKMEELNGI
LRAAEKRFEEIKEKMNQVEDITNPIKDELDKADSEVENRRRRLQYYEDRKKEHLTCIKKH
KELLAAKEKELEEKTAQARQIYSERIEVSRTVKSLDAEMNRLRERIKTEKSHRGNTEEII
QRFLDAKERYEDANSKVSNLKKFIRLLEEIMTQRFNIYRRFLRLLSLRCKLYFDHLLRIR
GCSGRILFDHKNETLSITVQPGEEDRPAPSNVRSLSGGERSFSTVCFILSLWSITESPFR
CLDEFDVYMDMLNRRIAMDMILKVADSQCHRQFILLTPQSMSFLPVSSRIRILRMQDPER
GQRTLTFRNRNEEEEDD
NT seq
3294 nt
NT seq
+upstream
nt +downstream
nt
atgggtaagagaaaggaagaaagtgtttcaaagcctccatcccacaaaagacagagacaa
gaacacacaggtgaacatagtgatgagtccagtgatgaagaaaactcactgttttcagct
gataatagctgtttctctttaacatcgactgtaggggaagctgggataattgaaagtatc
cagctgaggaacttcatgtgccattcgatgttggggccttttcagtttggatcgaatctc
aattttattattggaaacaatggaagtggaaaaagttctgttttaactgcgctgattgtt
ggacttggaggaaaagccactgctactaatagaggttcctcattaaaattgtttgtaaaa
agtggagagacttctgcagatatctcagtaacactgcaaaaccaaggcagagatgcattt
aaaccagaactgtatggtgactctattattgtgaatacgcacattaatctggaagggagc
agaacatacagactgaaaagcaaatctggtgctgtgatttcttcaaaaaaggaggaactc
ttaggaatgctggatcactttaatatacaggtagaaaatcctgtgtctgttttaacccaa
gagatgagtaagctcttcttacagtctaaaaatgagggtgacaagtataagtttttcatg
aaggcaactcagttggaacaaatgaaagaagattattcgtatatcatgaaaactaaagaa
aatacacgtcttcagatagaacaaggagtagagcgtctgaaagagcttaagcgaatttac
tgtgaagaaaaggagcgctatgaaagcattgagtgtgtgaacgaaatgcagaaacgtctt
gaagagctgaaacataaaatggcctgggcagtggtggctgagatggagagagaaatacaa
ccgatcagagaaggcatcaaagctgaagaaggaaatacagaaaagtttgatcagaagctg
gaagaatgtcagataaaagtaaatgaagcagaagaaaagtgcaaagcaatacaagagcag
ttgataacagtaaatagtgaagctgaagccctgcatactcaatgtatgtcttcaaaagcc
gaagttcagacaagaagaaaagcagtcaatgaagctgaggtgctttataatcgtgtcaga
actgagctgaaacgtctggcaaaagatgatgaacagctacataaccgaattgaggaaatg
aaaaagagtgcttatcaggcttcagagcctgaaaggctggaaaaacaaaggaaaatcaca
cagttaaaggagaagttgaaggcacttcatgatgaagaaataatgattggccaacagatg
catcagtttcagcaagctatttataagcataaagaagaatttgctaagcttaagagagaa
gactctgatgtgagacaagacttggatgctaaacagaagcacctgagagagctgagagat
agtaaaacaaatgccttcaaaagatttggacagcatatgccatcattgcttgaagaagtt
gaaatagccttcaggcaagggcaatttaaacacaaacctgttggacctttaggtgctttc
attcatccaaaagatcctgaactatctctggctattgaggcttgtttaaagaccttagtt
caggcattttgctgcgataatcatagtgatgaaagaattcttcagcaactgatgtcaaaa
tattatccacgtggagctagaccttcaataattgtaaataaatttcatgataagatttat
gatgttagacacagtgcagttcatcatccagagttcccatcagttctcacagcgttggaa
atagatggtgcagcggttgctaactgtttgatcaatgtgaggagtatagaaaaagtcctg
ctaattaaaagtagctataaagctcgtgaagtaatgcagtctaacaatcctccaaaaaat
tgtagagaagctttcactgctgaaggtgatcaagtatttaacagacgatattattcttct
gattacctcagacccaagtatctaagcaaagatgttgaagcagaaataagtctcttggag
aatgaaattgcaagccggaaagcacagctggcagcatctcagcaacgtttgtcttccact
gaaaaggaaattgagcagaatgaaagtcatcttcatcatcatcgacagcatcaaaaagaa
ctacagataaaaatgcgacgaacagctgcagaaatagcagacctcgagaatgttgatgaa
atccagtatatggacatccgtgtattagaagatgtggctgaagaaaataaaaaaaagatg
gaatctgtaagacaagaaatgcaggaagaaagcagaaaaatggaagaactgaatgggatt
cttcgggcagctgagaaaagatttgaagaaattaaagagaaaatgaatcaagtagaagat
atcaccaatccaattaaggatgaattggacaaagcggactcagaagtggaaaacagaaga
cgtcgtttgcagtactatgaagacagaaagaaagaacatttgacttgcataaaaaaacat
aaagaattattagctgccaaagagaaagaattggaggaaaaaactgcacaggctaggcaa
atctactcagagcgcatagaagtcagccgcactgtgaagagtcttgatgcagaaatgaat
cgcttgagagagaggataaagacagaaaaaagtcaccgcggaaacacagaagaaataata
cagagatttcttgatgcaaaggaaagatatgaggatgcaaacagtaaagtaagtaaccta
aagaaatttattaggctgctggaagaaataatgacacagagattcaacatatatcgtcgg
ttcttaaggctcctttctttgcgatgcaaactgtactttgaccacttgctgcgcattcga
ggttgcagtggaagaatactttttgatcacaaaaatgagacactttcgataacagttcag
cctggagaggaggacagacctgccccgagcaatgtgagatctttatcaggaggagaacgt
tccttctcaacagtttgtttcattctttctctatggtccattactgaatctcctttcaga
tgcctggatgaatttgacgtctacatggatatgctcaacagaagaattgcaatggatatg
attctgaaggtagctgactctcagtgtcatcggcagttcattttgctcaccccacaaagc
atgagttttctgcctgtaagttcccgtattcgtatcctccgaatgcaagaccctgaaaga
ggccaaagaacattgacgttccgtaataggaacgaagaagaggaagatgattaa
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