Lagopus muta (rock ptarmigan): 125690325
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Entry
125690325 CDS
T09141
Symbol
LAMA1
Name
(RefSeq) laminin subunit alpha-1 isoform X1
KO
K05637
laminin, alpha 1/2
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut04510
Focal adhesion
lmut04512
ECM-receptor interaction
lmut04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
125690325 (LAMA1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
125690325 (LAMA1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
125690325 (LAMA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_1
Laminin_EGF
Laminin_G_2
Laminin_B
Laminin_N
Laminin_I
Laminin_II
Laminin_G_3
3keto-disac_hyd
Motif
Other DBs
NCBI-GeneID:
125690325
NCBI-ProteinID:
XP_048794481
LinkDB
All DBs
Position
3:complement(49388512..49489632)
Genome browser
AA seq
3235 aa
AA seq
DB search
MCARSGTHRHGMRSHSSGGRTRKESLNFSSPWRCQSHRNAAQCLGLAVPPPPCPDASHRP
HLPPHHAPAEHQLIHCDSPELFRALSDHSWESCGEGAPRWGSVGVHGCGSGAERPGGAYK
TGALGGAGSGESLPAAAAMVTGSGGRRLLLVLLAAVALLGAPGRGQPRGLFPAILNLASN
AHISTNATCGEKGPEMFCKLVEHVPGRPLRNAQCRVCDRHSANPKEQHPISSAIDGTNNW
WQSPSIQNGRQYHWVTITLDLRQVFQVAYVIIKSANAPRPGNWILERSIDGTEFKPWQYY
AISDTECLTRYNITPRVGPPTYKRDDEVICTSYYSRLVPLEHGEIHTSLINGRPSADDPS
QKLLEFTSARYIRLRLQRIRTLNADLMTLSHHDPKELDPIVTRRYYYSIKDISVGGMCIC
YGHARSCPLDEVTKKLQCQCEHNTCGESCNRCCPGYHQKPWRPGTISAGNKCEKCNCHNK
AEDCYYNQSIADQKRSMNIHGQYTGGGVCLNCSQHTTGINCEMCADGYFRPQKVSPYDDH
PCYPCGCDPFGSLSSVCVKDEHQSDSQHGTWPGQCQCRDGYTGEKCDRCAFGYRGYPNCL
RCNCSLVGSINEDPCTEPCLCKENVEGENCDLCKPGFYNLQERNPQGCTECFCFGVSDVC
DSLTWPISQISDMAGWLITDLYNAKGVQPQRGQFDGPRQISINNTDAVKILKHTYYWSAP
EPYLGNKLTAFGGDLKYTVSYDIPMDSMDSDIVSSVDVIIKGNGQILSTRAAGLSLQPYE
EYSNSVRLVSDNFIDFNTKKAIDRERLMTVLVNVTHLLIRANYNIAKKAVYRLDSVTLDN
ASANVIDLSSSADVEFCECPQGYTGISCESCLPGYYRVDRILFGGICQPCKCNGHATECD
TQGVCFACQHNTTGPFCDQCLPGFYGSPSQGTPEDCQPCACPLSSAANNFSPTCQLSEGE
GIVCDKCLPGYTGSRCERCANGYYGNPLVPGQSCAPCECNGNVNTQEDGYCDTATGQCLK
CVGNTAGLHCEKCADGYYGDAVTEKSCRACECHVNGSLSSICHHKTGICDCKSDVIGQKC
DKCLNGYYGLLTGLGCVPCNCSQFGSISEDCNHQGQCHCLPGVTGEKCDRCAHGFHSLQN
GGCTPCDCAHTQNNCNAESGKCICPPHTRGPKCELCEENHWGLSPKLGCKACNCSGSGSN
SLQCDVLTGQCQCKAEFGGQNCSRCALGYRDYPDCVACDCDLSGTKAEMCDVTEGLCACE
EETGICTCKENVFGLQCSECKPGTFALSANNTLGCIPCFCFGMSTSCLEVEDHVRIPITL
TPDQSVLHVVAQSNLTGTVEGVFSQFPDVLLDAAIVRKYLNTETFYWRLPEQFQGDQLMA
YGGKLRYSVAFYALDGFGTSNFEPQILMKGGHTSKLVIYVDSPSPENGIRSEKEVEMKED
SWKYFNSVSDQPVSRSDFMSVLSNIEYILIKAAYGQGLQQSRIANISMEIAVKFEEMHLG
RSRAHLIEQCRCPTGYAGFSCQSCAPGYYREKPKEFSVRETHSIIAPCVPCQCNNHSETC
DPETGKCLNCRDNTVGDYCSACAPGYYGKVIGSVNDCSLCACPRANPVSFSPTCILKGVR
DYHCDACLPGYEGQYCEKCSLGYYGDPQLPGGSCHLCRCNPSGSVHLNCDRATGKCLCKQ
GVTGQLCEECEPRHLLLEEECVSCDDNCTGVLLNNLDGLSKDILSLNITGIVLVPSGILS
ELENATKHLKGFIAPREDPTYSLATAEEGLLSLSRDVDQLPEESSRILRKAWQLNTMTQE
TRSKSKELSGFIDTVHTAIKVLAEVAMSLNETLGLDLPLSNVTSQSLQDDISTLLNELRK
KDFVQRHYNATSVLKAAENLLLHVQKDYLKPQKELAELKKDASQLLSKHNSKLQDAQDLV
NDALADINETNRLFPLISSNLAELNEKKLSIKENKEVSTMLIKEGKFLVNVAAALSQDVK
NSTSNLEVHQDELLQWNTNLRHHVDELVMQMSVRGVLDLVYRAEDHAAQFQRLADALESG
LSKVKDVTLNATAAVYTHSNVKNVIERTESLADDASRIVNGPLDLPDESLSLLGKDTLQL
SSKVQNEAKNLKKKSNGLLSELNGLSKKIEKIQESTVKIVNQLNDSLLALKALPNGTRKY
MLEVKELAVYANISTMVGLNHFGDFSQKLLNASSTLSQVNGTLRKTSELIIDSSKAVITA
EKQAKEVEAQARLLLDRLKPLKTLEENLSRNLSEIKELISQARKQAASIKVAVSADRDCV
RAYQPQISSTNYNSLTLNVKTTEPDNLLFYLGSNGKTDFLAVEMRRGKVALLWDLGSGST
RVEYPDFQIDNNKWHRIHATRFGKTGTLSIEEMNSNQKSSPKSATSPGTASILDANESTL
MFIGGLGGQIKKSPAVKVTHFKGCMGEASLNGKSIGLWNYVEREGKCSGCFGSPQDEDTS
FHFDGRGYSVVEKALRSTVTQIIIFFSTFSPNGLLLYLASNGTRDFLSLELVDGKVRLAV
DLGSGPLVLTTENRYNNGTWYKISFSRNKKQGMLAVTDAYNLNYKETKQGEAPGVASDLN
RSDKDPIFIGGLPRSRAVRKGLNSRMYVGCIKNLEISRSTFDLLRNSYGVRKGCILEPIR
SVNILNNGYIELEPKSLSPESELMATFATKNSNGIILAGLSRGLEKRRRRQAHLPFFSIM
LIDGHLAVHVNAGDRASTRKVILRSANGTYSDGQEHSVILIRNKRIITIQVDESNPSELR
LGSSAEMSPMNISNFYAGGIPAGEGFFGLKMAGSFYGCISNLIFNKELLDFTTSMKYEHV
DMGSCFLSEKPKTAMQLEDMEIQAELPIPVRPPTDTKKVACAKDELPGHVQGAHQFGLAK
GSHLMLLFNQTTVRKKLSVQLNLRTFASSGLIYYMAHQNQIDYAALQLLGGQLYFSFDLG
KGRAVASHPAIINDGKWHTIRTEYVKRKGIIIVDGQELVSVSALGDGSTLDVEGKLYVGG
LPLDYVAKNLGNVTHSIPACIGSMTINSKQLDKESPVSIFAVNKCYATVQDGTFFDGSGF
AALVREGYKVRTDVNITLEFRTTAMHGVLLGISSAKVDAIGLEIVNGKVLFHVNNGAGRI
TAMYEPGVANSLCDGKWHKLQANTSKYRISLIIDGNLVQTDNPHIQSTSADTNNPIYVGG
YPGDVKQNCLTSKTSFHGCLRNLMLTKGQQADLFDFSRAFDLRGVFPHSCPGAQK
NT seq
9708 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgcgcggagtggaacacatcggcacggtatgaggtctcacagctctgggggacgc
actcgcaaggaaagcctcaatttttcaagcccttggcgatgtcagtcacataggaacgct
gcgcaatgccttggcttagcagtgcctcccccgccctgcccagacgcttcgcaccgtccc
catctccctccccaccacgctcccgcagagcaccagctcattcattgcgactctccagaa
ctttttcgggcgctcagcgatcacagctgggagagctgcggggagggggcacctcgatgg
ggctccgtgggtgtgcatgggtgcgggagcggggcggagcggccggggggagcctataag
acgggcgcgctcggcggggcgggcagcggagagtctctaccggctgcagcagcgatggtg
acgggcagcggcgggcggcggctgctgctggttctgctggcggcggttgcactgctcggg
gcgccgggacgtggccagccccgaggtctgtttcctgccattttgaacctggccagcaat
gctcacatctccaccaatgccacctgtggggagaagggaccagagatgttctgcaaattg
gttgagcacgtcccaggacggccactgcgcaatgctcagtgtcgagtttgtgaccgccac
agtgccaatcccaaagaacagcacccaatctccagtgcaattgatggtacaaataactgg
tggcaaagtcccagcattcagaatgggaggcaataccactgggtcaccatcactttggat
ctaagacaggtctttcaagttgcatatgtcatcatcaaatctgctaatgctccacgacct
ggaaactggattttggaacgctccatagatggcacagagttcaaaccatggcagtactat
gcaattagcgacacagagtgtttaactcgttataatattacaccaagagttgggccgcca
acttacaagagagatgatgaagtgatctgcacctcttactattccagactagttcctctg
gaacatggagagattcacacatctctgatcaacggcaggcctagcgctgatgatccttca
caaaagcttttggaatttacttctgcgcgatacattcgcctacgactgcagcgtattaga
acccttaatgctgacctcatgactctcagccatcacgatccaaaagaactcgatcccatt
gttaccagaaggtactactattcaataaaggacatctctgttggtggcatgtgtatttgc
tatggacacgctcgaagctgccccctggatgaagtcacaaagaaattgcagtgccagtgt
gagcataacacgtgtggcgagagctgtaacagatgctgtccgggttaccatcaaaaacca
tggagaccaggaaccatttctgctgggaacaaatgtgagaagtgcaactgtcataacaaa
gctgaggattgttattacaatcagagtattgcagatcaaaaaaggagcatgaatattcat
ggccagtacacaggaggtggtgtctgtttaaactgttctcaacatactactgggatcaac
tgtgaaatgtgtgctgatggatattttagaccacagaaagtttctccctatgacgatcat
ccatgctatccttgtggctgcgatccatttgggtctctgagttctgtctgtgttaaagat
gagcaccagtctgattcacagcatgggacttggccagggcagtgtcaatgcagagatggt
tacacaggggaaaaatgtgaccgttgtgcatttggatatcggggttatccaaactgcttg
cgttgcaactgcagccttgttggtagcattaatgaagatccatgcacagaaccttgtctt
tgcaaagaaaatgtagaaggtgaaaactgtgacctctgtaaaccaggattctacaacctc
caagaaagaaatcctcaaggctgcacagaatgcttctgttttggggtttctgatgtctgt
gacagcctaacatggcccatcagtcagatttcagacatggctggatggcttattactgat
ctctataatgcaaagggtgtgcaacctcagcgaggccaatttgatggtccccgtcaaata
agcatcaacaacactgatgctgtgaaaattctgaaacatacttactactggtcagcacct
gaaccgtatctaggaaataaactcacagcttttggtggggatttgaagtataccgtgtct
tacgacattccgatggacagtatggacagtgatatagtatctagcgtggatgtcatcatt
aagggcaacggtcagattttgagcacaagagcagcgggtttgtcattacagccctatgag
gagtactctaattcagtgagattggtatcagacaattttatagatttcaatacaaaaaaa
gccatagaccgagaaaggctgatgactgttctggtgaatgtgacccatcttctgatcagg
gccaactacaacattgccaaaaaagctgtgtacaggctggactcagtgaccctggacaat
gcaagtgcaaatgtaatagatctttcttcatcagcagatgtggaattctgtgaatgtcct
caaggttatacaggaatatcatgtgagtcctgtctccctgggtactaccgagtggatcga
atactctttggtggtatttgtcaaccctgcaaatgcaatgggcatgcaactgaatgtgat
actcaaggtgtttgctttgcttgtcagcacaacacgacaggacctttttgtgatcagtgc
ttgcctggcttttatggaagtccatcccaaggaactcctgaggactgccagccctgtgcc
tgtcctctgagctctgctgcaaacaatttcagtcctacttgccagctgagtgaaggagag
ggaattgtctgtgataaatgtcttccaggctatactggctctcggtgtgaaaggtgtgca
aatggttactatggaaatccactggtgcctggacagtcgtgtgctccttgtgaatgcaat
ggcaatgtaaacactcaagaagatggttattgtgatactgccacaggtcaatgcttgaaa
tgtgtggggaacacagcaggtcttcactgtgaaaagtgtgctgatgggtactatggggat
gcagtgactgagaaaagttgccgtgcctgtgagtgccatgtgaatggctccctttccagc
atctgtcatcacaagacaggcatctgtgactgcaagtcagacgtgattggacaaaaatgt
gacaagtgcttgaatggctattatggcttgcttactggacttggctgtgttccctgcaac
tgcagtcaatttggctccatctctgaagactgcaatcatcaagggcagtgccactgctta
ccaggagtgactggagaaaagtgtgatcgctgtgctcatggctttcactcgttgcagaat
ggtggctgtacaccctgtgactgtgctcatactcagaacaactgtaatgcagagtctggt
aaatgcatttgtccccctcatactcggggaccaaaatgtgaactgtgtgaagaaaatcac
tggggactctctcctaaacttggctgcaaggcctgcaactgtagtggttctggttcaaat
agtcttcagtgtgatgttttgacgggtcagtgccagtgtaaagctgaatttggaggacaa
aactgttccagatgtgcattaggctacagggactacccagactgtgttgcttgtgactgt
gacttaagtggaaccaaagcagagatgtgtgatgtcactgaaggactttgtgcttgtgaa
gaagaaactggtatctgtacctgcaaggaaaatgtgtttgggctacagtgcagtgagtgt
aaacctggaacttttgctctgtctgctaacaacacactaggttgtattccatgtttctgt
tttgggatgtccacatcttgtttggaagtagaagatcatgtgagaattcctataacctta
actccagaccagtctgttctgcatgtagtagctcaaagtaacctgactggaacagtggaa
ggagtattttcacaatttcctgatgttttactggatgctgccattgtcagaaagtactta
aatacagaaacattttactggaggttaccagagcagtttcaaggagaccagctcatggca
tacggaggcaaactgagatatagtgttgctttttatgctttggatggctttggaacctca
aattttgagccacagattctaatgaaaggtggtcataccagcaaattggtcatctatgta
gacagcccttctccagaaaatggaataagaagtgagaaagaagtggaaatgaaggaggat
tcttggaagtattttaattctgtgtctgaccagcctgtctcacgttctgacttcatgtct
gtgctaagcaatattgaatacatccttatcaaggcagcctatggccaaggattacagcaa
agcagaattgcaaatatctcaatggaaattgcagtgaagtttgaagagatgcatctaggc
agatctagagctcatcttatagagcaatgtagatgtcctactggctatgctggattctca
tgccagagctgtgctccaggatactacagggagaaacctaaggaattcagtgtaagagag
actcatagtattatagcaccttgtgtgccatgtcagtgtaataatcacagcgaaacctgc
gatcctgaaactggaaagtgtttgaactgcagagataacacagttggcgattactgcagt
gcttgtgctccaggctactatggaaaagtaattggatctgtcaacgactgctctctttgt
gcttgtcccagagccaaccctgttagttttagtcctacttgtatcctgaaaggcgtccgc
gattaccactgtgatgcttgtctcccaggttatgaaggacagtactgcgaaaagtgctcc
cttggctactatggtgaccctcagcttcctggaggcagctgccacctgtgtcgatgcaat
ccaagtggttctgttcatcttaattgtgatcgtgcgactggcaagtgcctctgtaagcag
ggagtgacaggacagctctgtgaggagtgtgaaccaagacatcttcttctggaagaagag
tgtgtttcttgtgatgacaactgcacaggagttttgctaaacaacttggacggtctcagt
aaagacatactttcactgaacattactggtattgtcctcgtgccctctgggatactatca
gagctggagaatgcaacaaaacatttaaagggctttatagctcctagagaggatccaaca
tactcgttagctacggcagaagaaggtcttctgagtttgtcaagagatgttgatcagttg
cctgaagagtcatctagaattttgagaaaagcttggcaacttaacacaatgactcaggaa
accaggagtaaaagtaaagaactgagcggatttattgacacagtacatacagccatcaaa
gtacttgctgaagttgcaatgtcactaaatgaaacactgggcctggacctcccactgtca
aatgttacatctcagagcctacaggatgatatttcaaccctactgaatgaactgcgcaag
aaagattttgttcaaaggcactataatgctaccagtgttctaaaagctgcagaaaatttg
ttgctccacgttcagaaagactatcttaaaccccagaaggagcttgctgagctgaaaaaa
gatgcaagccagctcttatcaaagcacaacagcaaactgcaagatgcccaggatctggtg
aatgatgcacttgctgacatcaatgagacaaatcgcttgtttcctcttatttctagtaac
ctggcagagttaaatgaaaagaagctgagtataaaggaaaataaagaagtctcaaccatg
cttattaaagaaggaaaattccttgtaaatgttgctgctgctctttcccaagatgtaaag
aactctacatcaaacttggaggtccaccaggatgagctactccagtggaataccaacttg
agacaccatgtggatgagctggtgatgcagatgtctgtgagaggagtgcttgacctggta
tacagagctgaggatcatgccgctcagttccaaagacttgcagatgcactggagagtggc
ctctcaaaagtaaaagatgtgactttgaatgcaacagctgcagtctatacccactccaat
gttaaaaatgtgattgaaaggacagagagtttggcagatgatgcatctaggattgtgaat
ggccctttggatttaccagatgaatctctcagtcttcttggtaaagacactctgcagctt
agctccaaagttcagaatgaagctaaaaatctgaagaaaaaaagtaacggccttttatct
gaattgaatggattgagcaaaaaaatagaaaagattcaggaaagtactgttaaaattgtc
aaccagcttaatgattccctgttggcactgaaagcgttgcccaatggtacaaggaaatac
atgctggaagtgaaagagctggctgtatatgcaaacatcagcactatggtgggtttaaac
cactttggggatttcagtcaaaagctgctgaatgcttcatctacattgtcccaagttaat
ggcacattgaggaaaaccagtgagcttataattgattcatcaaaagctgtaatcacagct
gaaaaacaagctaaagaagttgaagcacaagcgagacttttacttgatagactgaaacct
ctgaaaacgctagaagagaatctgagcagaaatttgtctgaaattaaagagctcatcagt
caagcccggaaacaagcagcatctattaaagttgcagtatcagcagacagagattgtgtt
cgtgcctaccagccccagatttcatctacaaattacaactctttaacccttaatgtgaaa
actactgaaccggataacctccttttctacctgggtagcaatggaaagacagacttcctt
gctgtggagatgcgacgtggtaaggtagctcttctttgggatttgggctcaggatcaaca
agagtagaataccctgattttcaaattgacaacaacaaatggcacagaatacatgcaacc
aggtttggaaaaacaggtacactcagcatagaggaaatgaactccaatcagaagtcttca
cctaaatctgcaacctcaccgggaacagctagtatactagatgctaacgaatcaacacta
atgtttattggaggacttggagggcaaattaagaagtcacctgctgttaaagtaacacat
tttaaaggatgcatgggagaagcatccctgaatggaaaatctattggtctttggaactac
gtagaaagagagggcaagtgcagtggatgttttggaagcccacaagatgaagacacttca
tttcattttgatggcagaggatactcagttgttgagaaggcacttcggtcaacagtgact
cagataataatattcttcagcaccttttcacctaatggcctacttctgtatcttgcttca
aatggcactagagatttcttgtcccttgagcttgttgatggcaaagtgagactggctgtt
gatctaggctcaggacctcttgttctgacaacagaaaatcgttacaacaatggaacatgg
tataaaatttcattcagtcggaacaagaaacaaggaatgctggcagtcacggatgcatat
aaccttaattacaaagaaaccaagcaaggagaagcacctggggttgcctcagacttgaat
cgctctgataaggacccaatcttcattggtgggctcccaagatcaagggctgtgaggaaa
ggtcttaatagtaggatgtatgtgggatgcatcaagaatctggaaatatcccgttcaacc
tttgacttgcttagaaattcatacggagtaagaaaaggctgtatattggagcctattcgt
agcgtgaatatcttgaacaatggatatatcgagttggaacctaagtccttaagtccagaa
tcagaactgatggcaacttttgctacaaagaacagcaatggtattatccttgctggactc
agtaggggactggagaagcgacggcgcagacaagcacatttgcccttcttttccattatg
ctgattgatggtcatcttgcagtgcatgttaatgctggagatagagcaagtactagaaaa
gtaattcttaggtctgctaatggaacatacagtgacggacaagaacactctgtcatccta
attcggaataagagaatcataactatacaggtggatgaaagtaacccctcagaactgagg
cttggttcatcagcagaaatgagccctatgaacatttccaacttctatgctggtggcatc
cctgcaggagagggcttctttgggctaaaaatggctggttccttttatggctgtatcagc
aatcttatttttaacaaggaacttttggatttcaccacttccatgaagtatgaacatgtg
gatatgggcagctgctttttgtcagaaaagcctaaaacagccatgcagctagaagacatg
gagattcaggctgaactaccaattcccgtgaggcctcctacagatacaaaaaaagtagct
tgtgcaaaagatgagctgcctggtcatgttcaaggtgcccatcagtttggacttgccaaa
ggcagccacttgatgctgctcttcaatcagactactgtcagaaaaaagctttctgtccag
ctgaatcttagaacctttgcctccagtggcctgatttactacatggctcaccagaaccaa
attgattatgcagccttacagcttcttgggggacagctctatttttcatttgatttaggc
aaaggaagagcagtagcttctcaccctgctattatcaatgatggaaaatggcatacgata
aggacagaatatgttaaaagaaaaggtatcatcattgtggacggacaggaattggtatca
gtcagtgccctgggagatggcagcactttggatgtggagggcaagctgtatgtgggagga
ctccccttagactatgtggcgaagaatcttggaaatgtgactcacagcattcctgcctgc
attggcagtatgacgattaacagcaagcaactggataaggagagccctgtctccatcttt
gctgtgaataaatgctatgcaacagtgcaggatggcacattctttgatggaagtggtttt
gctgctcttgtcagagaaggttacaaagtccggactgatgtgaacatcacgcttgagttt
cgtactacagccatgcatggagttctccttggaatcagcagcgctaaagttgatgccatt
ggattggagattgtaaatggcaaggttttattccatgtcaacaatggagctggcagaata
acagctatgtatgaaccaggagttgcaaacagtttatgtgatggaaaatggcacaagctt
caagcaaacacaagcaaatatcgtatctcactgataattgatgggaatttggttcaaact
gataatccccacattcagtcaacatctgcagatacaaacaatcccatttatgttggaggt
tatcctggtgatgtgaaacagaactgtctcacaagcaagacctcattccatggctgtctg
aggaacctcatgctaaccaagggccaacaggctgacttgtttgacttcagcagagctttt
gacctgcgtggagtctttcctcattcctgccccggagctcagaaatga
DBGET
integrated database retrieval system
