KEGG   Lagopus muta (rock ptarmigan): 125690420
Entry
125690420         CDS       T09141                                 
Symbol
CHMP4C
Name
(RefSeq) charged multivesicular body protein 4c
  KO
K24782  charged multivesicular body protein 4C
Organism
lmut  Lagopus muta (rock ptarmigan)
Pathway
lmut04144  Endocytosis
lmut04217  Necroptosis
Brite
KEGG Orthology (KO) [BR:lmut00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    125690420 (CHMP4C)
  09143 Cell growth and death
   04217 Necroptosis
    125690420 (CHMP4C)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:lmut04131]
    125690420 (CHMP4C)
   03400 DNA repair and recombination proteins [BR:lmut03400]
    125690420 (CHMP4C)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:lmut04147]
    125690420 (CHMP4C)
Membrane trafficking [BR:lmut04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-III complex
    125690420 (CHMP4C)
DNA repair and recombination proteins [BR:lmut03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    125690420 (CHMP4C)
Exosome [BR:lmut04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   125690420 (CHMP4C)
  Exosomal proteins of colorectal cancer cells
   125690420 (CHMP4C)
SSDB
Motif
Pfam: Snf7 Phage_TAC_15 DUF6437 THR4_C CEP19
Other DBs
NCBI-GeneID: 125690420
NCBI-ProteinID: XP_048794684
LinkDB
Position
3:complement(27910863..27926380)
AA seq 220 aa
MSKISRFFKGGGSAASKGRGGPSPQEALARLRETEEMLSKKQEYLETRIERELALARQHG
TKNKRAALQALKRKKRYEKQLSQIDGTLSTIEFQREALENSHTNTEVLKNMGYAAQAMKK
VHENMDLNKIDDLMQDITEQQDVAQEISEAISNRAAFGDEFDEDELMAELEELEQEEMNK
RMRDVRLPSVPSTSLPSRPVSTRKRVEDEDDMKQLAAWAS
NT seq 663 nt   +upstreamnt  +downstreamnt
atgagcaagatctccaggttcttcaaggggggcggctccgcggcctccaagggccgtggg
gggccctcgccgcaggaggccctggcccggctgcgggagacggaggagatgctcagcaag
aagcaggagtacttggagaccaggattgaacgggagctggcgctggctcggcagcacggc
accaagaacaagcgagctgctttacaagcactgaagagaaaaaagaggtatgagaagcag
ctgagtcaaattgatgggacgctctcaaccattgagttccagagagaggcactggaaaat
tcgcacacgaacacagaagtgctcaagaatatgggttatgctgcacaagctatgaaaaaa
gtgcatgaaaatatggacttgaacaaaattgatgacttgatgcaagatatcactgagcag
caagatgttgctcaggaaatttcagaagctatctcaaacagagctgcgtttggtgatgag
tttgatgaggatgagttgatggcagaattagaagaactggagcaagaagaaatgaacaag
agaatgcgagatgtcaggctgccaagtgttccatccacatcgctaccttctcgccccgtt
tcaaccaggaagagagtggaggatgaagatgacatgaagcagctagcagcctgggcttcc
taa

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