Lagopus muta (rock ptarmigan): 125690541
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Entry
125690541 CDS
T09141
Symbol
CARMIL1
Name
(RefSeq) F-actin-uncapping protein LRRC16A isoform X1
KO
K20493
leucine-rich repeat-containing protein 16
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lmut04131
]
125690541 (CARMIL1)
Membrane trafficking [BR:
lmut04131
]
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
125690541 (CARMIL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CARMIL_C
Carm_PH
LRR_6
IL34
Spectrin_5
Cep57_CLD
Motif
Other DBs
NCBI-GeneID:
125690541
NCBI-ProteinID:
XP_048794904
LinkDB
All DBs
Position
3:58438180..58611454
Genome browser
AA seq
1429 aa
AA seq
DB search
MAEESAELPRELIESIRDVIGRKIKISVKKKVKLETKGDKVDNKILVLASCRAFLLTSRI
PTKLELTFSYLEIQGVTSCKPGQLIMETEKCSISMKMASSEDVNEVLAHIGTCLRKIFPG
LSPVRILKKVTMEPSERLVNLQALWDSQTVAELGPCGGFSQMYACVCDWLGFPYREEVQW
DVDTIYLTQDTRELNLQDFSHLDHRDLIPIVAALEYNQWFTKLSSKDLKLSTDVCEQILR
VVSRSNRLEELVLENAGLRTDFAQKLASALSHNPNSGLHTINLASNPLEDRGVSSLSIQF
AKLPKGLKHLNLSKTSLSPKGVNSLSQSLSANSLIANTLVYLDLSGNALRGDDLSSLYNF
LAQPNALVHLDLSNTECALDMVCGALLRGCLQHLAVLSLSRTLFSHRKGKEVPPSFKQFF
SSSLALMQINLSGTKLPPEPLKALLLGLACNHNLKEVSLDLSSCELRSGGAQVLEGCIAE
IRNITSLDISDNGLESDLSTLVVWLSKNRSIRHLALGKNFNNMKSKNLTPVLDNLVQMIQ
DEDSPLQSLSLADSKLKTEVTIIINALGSNTSLTKVDISGNAMGDMGAKMLAKALQINTK
LRTVIWDKNNITAQGFQDIAVALEKNYTLRFMPIPMNDASQALKTNPEKTEEALQKIENY
LLRNHETRKYLQEQAYRLQQGIVTSTTQQMIDRICVKVQDHLNSLRNCGVDAVQEDVKSA
ERLMRDAKNSKTLLPNLYHLGGAAWAGANGSLPNPIQETLESMAGEVTRVVDEQLKTLLE
SMVDAAENLCPNVMKKAHIREDLIEASTEKISIPRTFVKNVLLEQSGIDILNKISEVKLT
VASFLSDRVVDEILDALSHCHHKLADHLTRRGKPLPQQESLEIELAEEKPTKRSIITVEE
LTEIERLEDLDTCMTLCCTSMTPKSKRKSIHSRMLRPVSRAFEMEFDLDKALEEVPIHIE
DPPFPSSRPDKRTSGFISELPSEEGRKLEHFTKLRPKRNKKQQPSQAAVSAGVPPDGEQN
GLMGRVDEGVDEFFTKKVTKMDSKRPSTKSSESSEPSEAGDEKKKRDSRKSGFLNLIKSR
GSKSERPQTVMVAEEPSSPKVASKSQVVDSSKKELKPAEQNGGTERSEELKTPDSLEEMQ
PDDAAKAERGDSKGSPQGGRRYGVQVMGSGLLAEMKAKQEKRAASAQKKLGNDTPSKEPS
DAAVSSERLDGSGTVPKLSLPESRFASNKGDSISASSEKNAKAEPKAEAVAKARSSSNTP
TSPKPPLQSAKPSLAGRPTVPQKPRSASRTEDAPESPSGPSSPKVALLPPVLKKVASDKE
KDGQSSPTVRSFSQEERTGEGQKRAADHDCAKPPGGGGATLGQCSASVEEEGSVLGLRKA
QPAPAAKRSPGHQSHEFQELKQRSLSKDGHQGSKSSDSGEEADKDFIFV
NT seq
4290 nt
NT seq
+upstream
nt +downstream
nt
atggccgaggagagcgccgagctcccccgcgagctcatcgaaagcatcagggatgttatt
ggaaggaaaatcaaaatttcagtcaagaagaaagtaaagctggaaaccaagggagacaaa
gtggataacaaaatattggtactggcatcatgtcgggcatttctgttaacatctcgcatt
cccaccaagttggaactaactttcagctacttggaaatccaaggagtaacttcctgtaag
ccaggtcagctgattatggaaactgagaaatgcagcatctccatgaagatggcgtcctct
gaggatgtgaatgaggtgctggcgcacattggaacctgcctcaggaagatatttcctgga
ctctctccagtgaggattctgaaaaaagtaacaatggagccttcagaaagactggttaat
ctccaggccctgtgggacagtcagacagtggcagaacttggaccttgtggaggcttttca
cagatgtatgcctgtgtgtgtgattggcttggatttccatatagagaagaagtacagtgg
gatgttgacacaatttatctgacacaagataccagagagttgaatttgcaagacttcagc
catcttgaccacagagacttaataccaatagttgctgctctggagtataatcagtggttt
acaaagctgtcctccaaggatctgaaattatccactgatgtctgtgagcagattctgcga
gtagtgagtaggtccaatcgattggaagagctggtattagagaatgctgggcttagaaca
gattttgcacagaaactagccagtgccctatcccataatcccaactcaggacttcataca
atcaaccttgctagcaatccacttgaagaccgaggtgtatcatctctaagcatccagttc
gccaaacttccaaagggactgaaacatttaaacttatctaaaacctccttgtcacctaaa
ggggtgaacagcctttcccagtcactgagtgccaactcgctgatagcgaacacgctcgtc
tatcttgacctctcagggaatgctctccgtggggatgatctctcaagcctctacaatttt
ttggcccagccaaatgcccttgttcatctggatttatccaacacagagtgtgctctagat
atggtgtgtggagccctccttcgtggatgtcttcagcatctagctgtccttagtctttcc
aggacgcttttttctcacagaaaaggaaaagaagtccctccctccttcaaacagtttttc
agcagctcacttgcattgatgcagattaatctctcgggaactaaactgcctcctgagcct
ctgaaagcgcttttattaggcctggcttgcaatcacaatctgaaggaggtgtctttagat
ctcagtagctgtgagttaagatcgggaggtgcacaagtcttggaaggatgcatagcagaa
atacgcaatatcaccagcctagatatttcagataatggcctagaatctgacctctcaacc
cttgtagtctggcttagtaaaaaccgatcaataaggcacttggcattaggcaaaaacttt
aacaacatgaaatccaaaaatctcactccagtacttgataatttagttcagatgattcaa
gacgaggattcacccctgcagtcattgtccctcgcagattccaagctgaagactgaggtc
accatcattattaatgctttgggcagcaatacttctcttacaaaagtggatattagtgga
aatgccatgggtgatatgggagcaaagatgctggcaaaagctctacagataaacacaaag
ctcagaactgtaatatgggacaagaacaatatcactgctcagggcttccaggacatagct
gtggcactggaaaaaaattatactttgagattcatgcctatacctatgaatgatgcttcc
caagcactgaaaacaaaccctgagaaaacggaagaggcactgcaaaagatagaaaactac
ttgcttcgtaatcatgagaccagaaagtacctacaggagcaagcatatcggttacagcaa
ggcattgttactagtaccactcagcagatgattgacaggatatgtgttaaagtgcaagat
catctcaactccttaagaaactgtggtgtggatgctgtacaggaagatgttaaatctgca
gaaaggcttatgcgagatgccaagaactccaaaacacttttaccaaacctgtaccacctt
ggcggagctgcttgggcgggagcaaatggttcactccccaatccaatccaagagacgctt
gaatccatggctggagaagtcacaagggttgtggatgagcagcttaagactctccttgaa
tccatggtggatgcagcagaaaatctttgcccaaatgtaatgaagaaagctcatatccgt
gaagacctgattgaagctagcactgagaagatttccatcccacgcacttttgtgaaaaat
gtccttctggagcaatctggaattgatatcctcaataaaatcagcgaagtaaagctgaca
gtggcttctttcctgtctgaccgagttgtagatgaaattctggatgcactttcgcactgc
catcacaaactggctgaccatttgaccagacgtggcaaaccacttccacagcaggaatca
ctggaaattgagttagctgaagaaaaaccaactaaacgctctatcatcacggttgaagag
ttaacagagatagaacgtttggaggacctggacacctgcatgactctctgctgtacaagt
atgactcctaaatcaaaaaggaaaagtattcacagtagaatgctccggccggtgtccaga
gcttttgaaatggaatttgatctagataaagcactggaagaagtacctatccatatagaa
gacccaccatttccttccagcaggccagacaaacgaacttctggattcatttcagagttg
ccatcagaagaagggagaaaacttgaacactttacaaagttaaggcccaaaaggaataaa
aaacagcagcccagccaagcagcagtatctgctggagtgcctccagatggtgaacagaat
ggcctcatgggaagagtagatgaaggtgtggatgaatttttcacaaagaaagtcacaaaa
atggattcaaagagaccatcgactaaaagttcagagagcagtgagcccagtgaagcaggt
gatgagaagaagaaaagggactcaaggaagagtggcttccttaacttaatcaaatcaaga
ggctccaaatctgaacgtcctcagactgtaatggtggctgaggagccctcctcacccaag
gttgcttcaaaaagtcaagtggtggactccagtaagaaggagctaaaacctgcagagcag
aatggtggtacagagcgatccgaggagttaaagacgccggactcactggaggagatgcag
ccagatgatgctgcaaaggctgaaagaggtgacagcaaaggaagcccgcaaggaggccgg
aggtacggcgtgcaggtgatgggcagtggacttcttgcagaaatgaaagccaagcaggag
aagagagcagcctctgctcagaagaaacttgggaatgacacaccttccaaggagccttct
gatgcagcagtgagctcagaacgactggatggaagtggtacagtgcctaaactctccctt
ccagagagccggtttgcctccaataaaggtgactctatctcagcatcatctgaaaaaaat
gcgaaagctgaaccaaaggcagaagctgtggcaaaggcaagaagttcttccaatacacca
accagccccaaacccccgctgcagtcagcgaagcccagcctggcaggacggcccacggtg
ccacagaaaccacgctctgcctctcgcactgaggatgctccagagtctccctctggcccc
agctccccaaaagttgccctgcttccacccgtgctgaagaaagttgcctctgataaagaa
aaggacggtcagagcagccccacagtcagatcattttctcaagaagagagaacaggagaa
ggtcaaaaaagagctgcagaccatgactgtgccaagccgcccggaggagggggagccact
ttggggcagtgctctgccagtgtggaagaggaaggcagtgtgcttgggctgaggaaagct
cagccagctcctgctgccaaaagaagccctgggcaccagtcccacgagttccaggagctg
aagcagaggtccttaagtaaagatggccatcagggaagcaagtccagcgactctggcgaa
gaggcagataaagattttatttttgtttag
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