Lagopus muta (rock ptarmigan): 125690561
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Entry
125690561 CDS
T09141
Symbol
RPRD1A
Name
(RefSeq) regulation of nuclear pre-mRNA domain-containing protein 1A isoform X1
KO
K15559
regulator of Ty1 transposition protein 103
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lmut03021
]
125690561 (RPRD1A)
Transcription machinery [BR:
lmut03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
125690561 (RPRD1A)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CREPT
CID
CTK3
CCDC113_CCDC96_CC
Motif
Other DBs
NCBI-GeneID:
125690561
NCBI-ProteinID:
XP_048794936
LinkDB
All DBs
Position
3:complement(64786534..64833188)
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AA seq
311 aa
AA seq
DB search
MSAFSEAALERKLSELSNSQQSVQTLSLWLIHHRKHSALIVSVWERELRKAKPNRKLTFL
YLANDVIQNSKRKGPEFTKDFAPVIVEAFKHVSSESDESCKKHLGRVLSIWEERSVYEND
VLEQLRQALYGDRKVKKRTYEQIKIDENNCSPRSSPTDPPQTMDLIRALQELENAASGDA
AVHQRIASLPLEVQDVSLLDRITDKESGEQLSKMVDDACMLLADYNGRLAAEIDDRKQLT
RMLSDFLRCQKEFLAEKEHKLEEYKRKLARVSQVRKELRTRIQNLPDLSRLPNVTGSHVH
LPFAGDIYSDD
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcgttctcggaggcggcgctggagcggaagctgtcggagctgagcaactcgcag
cagagcgtgcagaccctgagcttgtggctcatccatcatcgcaagcactcggcgctcatc
gtcagcgtgtgggagcgggagctgcggaaagcaaaaccaaataggaagctgacattcctg
tacttggccaatgatgtcatacagaacagcaaaaggaaaggaccggagtttacaaaagac
tttgctccagtaatagtggaggcttttaagcatgtttcaagtgagtctgatgaaagttgt
aaaaagcaccttggccgagtgctctctatctgggaagaaaggtctgtttatgaaaatgat
gtattagaacaacttaggcaagctttgtatggagacagaaaggtgaagaagcgtacgtat
gaacaaataaaaattgatgaaaataactgttcacctcgaagttctcctactgaccctcca
cagaccatggatctcattagagcattgcaagaactagaaaatgctgcttctggggatgca
gcagttcatcagaggatagcttctttgcctttagaggtccaagatgtgtccctgttagac
aggataacagacaaggaatctggagagcaactttccaaaatggtagacgatgcatgtatg
ttgctggcggattacaatggcaggttggcagctgaaatagatgataggaaacagctaact
cgaatgttgtcagactttctacgatgtcaaaaagaatttcttgcagagaaggaacataag
ctggaagaatacaaacgcaagctagccagagtgtcccaggtacggaaagaactcagaaca
cgtatccagaacctgcctgacctctctcgacttcccaacgtcacgggcagccacgtacac
ctgccatttgcaggagacatctacagtgatgactga
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