Lagopus muta (rock ptarmigan): 125690569
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Entry
125690569 CDS
T09141
Symbol
DCAF13
Name
(RefSeq) DDB1- and CUL4-associated factor 13
KO
K11806
DDB1- and CUL4-associated factor 13
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lmut03009
]
125690569 (DCAF13)
04121 Ubiquitin system [BR:
lmut04121
]
125690569 (DCAF13)
Ribosome biogenesis [BR:
lmut03009
]
Eukaryotic type
90S particles
Other 90S particles
125690569 (DCAF13)
Ubiquitin system [BR:
lmut04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
125690569 (DCAF13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sof1
WD40_Prp19
WD40
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
WDR55
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
WD40_RFWD3
MIOS_WD40
Beta-prop_IFT122_1st
eIF2A
Beta-prop_IFT140_1st
ANAPC4_WD40
KNTC1_N
Beta-prop_WDR35_TULP_N
RMC1_N
Motif
Other DBs
NCBI-GeneID:
125690569
NCBI-ProteinID:
XP_048794996
LinkDB
All DBs
Position
3:complement(20120560..20144723)
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AA seq
445 aa
AA seq
DB search
MRVKVLSRNPDDYVRETKLDLQRVPRNYDPALHPFEVAREYVRALNATKLERVFAKPFLS
SLDGHRDGVNCIVKHPKSLSTVLSGACDGEVRIWNLTKRQCIRALQAHEGFVRGMCARFC
GTSFFTVGDDKTVKQWKMESPGYGEEEEPIHTILGKTVYTGIDHHWRDAVFATCGQQVDI
WDEQRTSPMCSLTWGFDSISSVKFNPIETYLLGSCASDRNIVLYDMRQSTPLKKVILNMR
TNTLCWNPMEAFIFTAANEDYNLYTFDMRYLTSPVMVHMDHVSAVLDVDYSPTGKEFVSA
SFDKSVRIFPVDKGHSREVYHTKRMQHVITVKWTSDNKYILCGSDEMNIRLWKANASEKL
GVLAPREKAAMNYNQKLKEKFQHHPQIKRIARHRHLPKSIYCQIKEQRIMREARRRKELN
RRKHSKPGSVPVVSEKKKHIVAVVQ
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgcgggtgaaggtgctgagccgtaatcccgacgactacgtccgggagacgaagctggat
ctgcagcgagttccaagaaactatgaccctgcactgcatccatttgaggttgcacgtgag
tacgtcagagctctgaatgcaacaaagctggagcgggtgtttgcaaaaccttttctaagc
tcactcgatggccacagagatggagttaattgcatagtcaaacaccccaagagtttgtct
acagtgctgtctggagcatgcgatggagaggttagaatttggaacttgaccaaacgacag
tgtattcgtgctttgcaagcccatgaaggctttgttcgaggcatgtgtgctcgtttctgt
ggtacatcattctttactgttggtgatgacaaaactgtgaagcaatggaaaatggagagc
ccaggatatggagaagaagaggaaccaattcatacaattcttggaaagacagtgtataca
ggaattgatcaccactggagggatgctgtttttgccacctgtggccagcaagtagacatc
tgggatgagcaaaggaccagtcccatgtgttctctgacgtggggttttgatagcataagc
agtgtaaaatttaatccaattgagacataccttttgggcagctgtgcttctgacagaaat
attgtgctgtatgatatgagacaatcaactccattaaagaaggttatcttgaacatgagg
acaaatacactctgttggaaccccatggaagcttttatttttactgcagcaaacgaagat
tacaacttgtatacttttgacatgcgctaccttacatcacctgtgatggtgcacatggac
cacgtgtctgctgttcttgatgtggattattcacccactgggaaagaatttgtttctgcc
agcttcgataaatctgtccgcatttttcctgtagacaaaggtcacagcagagaggtgtat
catacaaagcggatgcagcacgtcatcactgtaaaatggacttcagataataaatacatt
ctgtgtggctcagatgagatgaatattcgtctgtggaaggccaatgcttctgaaaaactg
ggggtgcttgcaccacgagagaaggcagctatgaattacaatcagaagttgaaggagaag
ttccagcatcacccacagatcaaacgcatcgctcggcaccgtcacttgcctaagagtatc
tattgccaaatcaaagagcagcggatcatgagagaagctcggcggcggaaggagttgaac
cgtcgtaagcacagcaaaccaggatctgtgccagtggtgtcagagaagaagaaacatatt
gtggcagtagtgcagtaa
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