Lagopus muta (rock ptarmigan): 125690579
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Entry
125690579 CDS
T09141
Symbol
SMC1B
Name
(RefSeq) structural maintenance of chromosomes protein 1B isoform X1
KO
K06636
structural maintenance of chromosome 1
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut04110
Cell cycle
lmut04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
125690579 (SMC1B)
04114 Oocyte meiosis
125690579 (SMC1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lmut03036
]
125690579 (SMC1B)
Chromosome and associated proteins [BR:
lmut03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
125690579 (SMC1B)
Meiosis-specific proteins
Cohesin complex and associated proteins
125690579 (SMC1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_15
AAA_29
rve
Motif
Other DBs
NCBI-GeneID:
125690579
NCBI-ProteinID:
XP_048795015
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All DBs
Position
1:complement(69620153..69654991)
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AA seq
1243 aa
AA seq
DB search
MAFVPTASGMGYLKLLIVKDFKSWRGEQLIGPFMRFNCIIGPNGSGKSNIMDAVSFVLCE
KISNLRVKSVRELIHGAHVGKPVSSTASVKIVYCEEDGEEKTFSRVIRDGCSEYIFNDKS
ITRSAYISELEKIGILVKARNCLIFQGTVESIAMKKPKERTQLFEQISNSWQYAEEYEKK
KKKMQQAEEDAHFNYNKKKNIAAERKQAKVEKEEAEHYQMLVRELNANRIQLQLFQLYHN
ERSIESLKESLDEKNMEARVKKDSLSTAEDAFRGKKKVLGVLNRDQQHIEREMKTLQASL
IQQKALYIKAKENTSYQIKKVEMSKRSLRDKEKHCDKEKQNIKELEIELHDTEKAWREFE
KETEEEILLRVERVELRERQLERYKELKEIARREVAMLTQQLGKLRWEQKADEERMKLYQ
RKKKEIKETIVQTVEQIEEYKKKVEKLEEYTKKCTESLAEEKKKEEMLAKEMENSTTRIA
EVNEELNKIVGELQNARIDYHEGKRQQMRAEIVESLKRLYPDSVFGRLLDLCHPIHKKYQ
LAVTKVFSKYVTAIVVATEKTARDCIQFLKQERAEPETFLALDYLEVKPINERLREIKGA
KMIVDVVQTPFAPLKKVIQFVSGNGLVCETVKEARQIAFDGPVRLKTVALDGTLFLKSGV
ISGGSSDLRVKARCWDEKEINKMKERRDKLITELKDLMKIKRKEADLKQLQAQCRGTQTR
LKYSQSELDLIKKKHLPNLYMEKSKLESELVNTESQHDMIKEGVVQRKLKLEELQKQINE
AEDAVFQEFCEEIGIENIRVYEQEHVKKQEEIDKRRLEFENQKTRLSVQLEYNREHLQKL
IETVSKLRDTINKDESEITGLQKDEEKHLKKVKEIEEEEQHLKDRLSVQKSEIIKTQSEA
EELRKTFLTLNREAAKLQKEAAAIEASLEDKRLRRHNMLLECKVQDLKIRLLSGSLDDIS
EIELGTETEDTQTTGIYEKEEAIKIDYSSLPKELKDLESDKEIEAHLNQIQQEIKSKESI
LMKTAVPNLRAVEKLQIARTKFQESMEAFETSRKEARISKQEFEEVKKRRYELFSQCFEH
ASIVIDQVYKKLCRNSSAQAFLSPENPEEPYLEGIGFNCVAPGKRFMPMDSLSGGEKTVA
ALALIFAVHSFRPAPFFILDEIDAALDNTNIDKVSIFIREQAHKQFQMVVISLKEEFYSK
ADALIGVCPEHDDYVFSRVLTLDLTQFPEDEEEKENNKRRSSE
NT seq
3732 nt
NT seq
+upstream
nt +downstream
nt
atggcctttgtacccacagcctcagggatgggctacctgaagctgctgatagtgaaggac
ttcaagtcctggcgtggggagcagctgatcggccccttcatgaggttcaactgcataatt
gggcccaatggatcaggaaaatctaacataatggatgctgttagttttgtgctgtgtgaa
aagatatctaatttgcgagttaaaagtgttcgagaactaattcacggagcacatgttggc
aaaccagtttcttctacagcaagtgtaaagatagtatactgtgaagaagatggggaagaa
aaaacattttcaagagttatccgtgatggttgttcagaatatattttcaatgataagtct
attacccggtccgcttacatatctgagcttgaaaaaataggcatacttgtcaaagctagg
aattgtcttatttttcagggaacagtagagtcaattgcaatgaagaagccaaaagaaaga
actcaactttttgaacaaatcagtaactcatggcaatatgctgaggaatatgaaaaaaaa
aagaaaaaaatgcagcaagcagaagaggatgcacacttcaattataacaagaaaaaaaat
attgcagcagaacgcaagcaagcaaaggtagagaaagaagaggcagagcattaccagatg
cttgtcagagaactgaatgcaaacaggatacagcttcagcttttccagctctatcacaat
gaaagaagcattgaatctctgaaagagagtttggatgaaaagaatatggaagctagggtc
aagaaagactccctttctacagcagaagatgcctttagaggaaagaaaaaggtgcttggt
gtactaaacagagaccaacaacacatagaaagggaaatgaagactcttcaggcatccctg
attcagcagaaagccctctatataaaagcgaaggaaaatacttcctaccaaatcaagaaa
gtagaaatgtctaaaagatctctaagggacaaggagaaacactgtgataaggaaaaacag
aacataaaagaactggagatagaattgcatgatactgaaaaggcatggagagaatttgag
aaggagactgaagaggagatattgctgagagtagaacgtgttgagctgagagaacgtcag
ctggagcgctataaagaactaaaggaaattgcaagaagggaagtagctatgctaacacag
cagctaggtaaacttcgttgggagcaaaaagcagatgaagaaaggatgaaactttatcag
aggaagaaaaaggaaattaaggaaaccattgtacagactgtggaacagatagaagagtat
aagaaaaaagtagagaagttggaagaatatactaagaaatgcactgagtcactggcagaa
gaaaaaaagaaggaggaaatgctagctaaggaaatggagaattcaacaacgcgaatagct
gaagtgaatgaagaattgaacaaaatagttggtgaactacagaatgccagaattgattac
catgagggaaagcgtcagcaaatgagagcggagattgttgaaagccttaaaagactgtat
ccagactctgtgtttggaagattgcttgatctgtgccatcctattcataagaaatatcag
cttgctgttaccaaagtattcagcaaatatgtgactgctattgttgttgccactgaaaaa
acagcaagagattgcattcagttcctaaaacaagaacgagctgaacctgaaactttcctt
gctttggattaccttgaggtcaagcccatcaatgagaggttaagagagataaaaggagct
aaaatgattgtggatgttgtgcagactccatttgctccattgaaaaaagtgattcagttt
gtgagtgggaacggcttggtctgtgaaacagttaaagaagcaagacaaatagcatttgat
ggaccagtgagattgaagaccgtggcacttgatgggacattatttctgaaatctggagtg
atttctggaggatctagtgatttaagagttaaagctagatgctgggatgagaaagaaata
aataaaatgaaagaaagaagagataaattgattaccgagttgaaggatttaatgaagata
aaacgcaaggaagctgatttgaaacagttgcaggctcagtgccgtggaactcagacacga
cttaaatactcacagagtgaactagatcttattaaaaagaaacatcttcctaatctctat
atggaaaagtcaaagctggaaagtgaactggtaaatactgagtctcagcatgatatgata
aaggaaggagtagtacaaagaaaactaaaactggaagaattacagaagcagattaatgag
gcagaagatgctgttttccaagaattctgtgaagaaattggcattgaaaatatacgtgtg
tacgaacaagaacatgtgaaaaaacaagaagagattgataagagaaggttggagtttgaa
aatcagaagacacgactaagtgtgcagctggaatataatcgtgagcatctacagaaacta
atagaaactgtcagcaagttaagggatactattaataaagatgaatctgagattactgga
ttacagaaggatgaggaaaagcatctaaaaaaggtgaaagaaattgaggaggaggagcag
catcttaaagatagattaagtgttcagaaatctgagattataaaaacccaaagtgaagca
gaggagttgagaaaaacgtttttaactcttaatagggaagctgcaaaattacaaaaggaa
gctgcagctatagaagcttctctggaagataaaagattaagaagacataatatgcttcta
gaatgcaaggtgcaggacttgaaaatacgtctcctgtctggatcgttggatgacatcagt
gaaatagagctaggaactgaaacagaagacactcagactacaggtatctatgaaaaggaa
gaggcaattaaaatagactacagtagcctacctaaagaactgaaggacctagagtctgat
aaagagatagaggctcatctgaaccagattcagcaggaaataaaatctaaggagagcatc
ttaatgaagacagctgttccaaacctaagagcagtagagaaattacaaatagctcggacc
aaattccaagaatcaatggaagcttttgagaccagcagaaaggaggccagaatatccaag
caagaatttgaagaggtgaaaaaaaggagatatgaactttttagccagtgctttgagcat
gcatccatagttattgatcaggtctacaagaaactttgcagaaacagtagtgcacaggca
ttccttagtcctgagaatcctgaggagccttacctggaaggcataggctttaattgcgtg
gcacccggaaagcgctttatgccaatggacagtttgtcaggaggagaaaaaactgtggcc
gctctggctcttatatttgctgtacacagttttcggcctgcaccattttttattttagat
gagatagatgctgccctggataacacaaacattgataaagtatcaattttcattagggaa
caggcacataaacaatttcaaatggtagttatttctctgaaggaagagttttattccaaa
gcagacgcattgattggagtgtgtccagagcatgatgactatgtgttcagtcgagtactg
actttggatcttacccagtttccagaggatgaagaagaaaaagagaataacaaacgcaga
tcttcagaataa
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