Lagopus muta (rock ptarmigan): 125690601
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Entry
125690601 CDS
T09141
Symbol
RB1CC1
Name
(RefSeq) RB1-inducible coiled-coil protein 1 isoform X1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
125690601 (RB1CC1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lmut01009
]
125690601 (RB1CC1)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lmut04131
]
125690601 (RB1CC1)
03029 Mitochondrial biogenesis [BR:
lmut03029
]
125690601 (RB1CC1)
Protein phosphatases and associated proteins [BR:
lmut01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
125690601 (RB1CC1)
Membrane trafficking [BR:
lmut04131
]
Autophagy
Autophagosome formation proteins
ULK complex
125690601 (RB1CC1)
Mitochondrial biogenesis [BR:
lmut03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
125690601 (RB1CC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG11
ATG17_like
TBK1_ULD
Motif
Other DBs
NCBI-GeneID:
125690601
NCBI-ProteinID:
XP_048795070
LinkDB
All DBs
Position
3:39210211..39281737
Genome browser
AA seq
1598 aa
AA seq
DB search
MKLYVFLVNTGTTLTFDTELAVQNVADLKHAIQAKYKIAIQHQVLVVNGGECMAPDRRVC
SYSAGTDTNPIFLFNKEMILCERPPAIPKTTFSAENEMELKVEESLMMPAVFHTVASRTQ
LAVEMYEVAKKLCSFCEGLVHDEHLQHQGWAAIMANLEDCTYSYQKLLFKFENVYSSYLQ
SIEDIKLKLTHLGSAVSVMAKIPLLECLTRHSYRECLGRLDSSAEHGVAESEETEHGKSS
ELVLYSDVSKVNNKSMLASFCKSVEHSALEGTNPENVKDDKESGQNTTVQDNETSVELKD
DDQPSFNVSLLDWINVQDRPNDVESLVRKCFDSMSRLDPRIIQPFLAECRQTIAKLDNQN
MKAIKGLEDRLYALDQMIASCSRLVNEQKELAQGFLANQKRAENLKDPSVLPDLCLSHAN
QLMIMLTNHRKLLDIKQKCTTAKQELANNLQVRLKWCCFVMLHADQDGEKLQALLRLVTE
LLERVKVVEALSTVPQMYCLAVVEVVRRKMFIKHYREWAGALINDGKHLYEAERAKRESF
GKLFRKSFLRNRLFRGLDSWPPSFCTRKPRRFDSELPDISLSDLQFLQSFCPSEVQPLLR
VPILCDFEPLHQHVRALHNLVKAAQSLDEMSQTITDLLNEQKASNSQTSPQSATTPRMES
TTGTTIATSSRTPPSLSLQGPLCPPVCPPAPLEELSPDSIDAHTFDFETIAHPNLEQALK
QGSLDLDSLAESPESDFMSAVNEFVIEENPVSPNAISDPQSPEMMVESLYSSVINAIDSR
RMQDTGSCVKDISVENASRSVCMEKCKVIAQDSKVRLRGIKEDLCHFRTLVQKEQCDFSN
SLKCTSLEIVNTIEKVKLSLEKTLKDKHQKELQSLKSEYETKINKLLEDDEESKKKIVKL
KGDLLGLEEVLQNKNNEFAMVKNEKEAVVSLQNEKDQKLHELECQMETQNSEIKKLRQSR
EIVLEDLKKLHVENDEKLQLLRAELQSLEQSRLKELENNLQARHLQEFEKVLAEHKDSLD
QLKKENQHRLEQMQESHAAIVQEKQQQVEELKLKVSDLSDLRCKLEVELALKEAETDEMK
LLLEESRNQQQETLKSQIDKETESLKKEIEKLNSKIQVSSDEYQVGLSELRTLMTIEKDQ
CISELVDRYEEESNLLRTELNKVTVLHQKTSEAEKRLSDQITELQCKLELEKNALEKEKT
EKMALCEQQEKYEAIIHRLKEEKDLLVSNQEQDKQLLIQKLNSEKEDAVQTACKEFELQK
EAVEKGLLEKIQQLEMQVNQSPPTESSAESSLVAELQEKLQEEKMKFLEQLEEQERRKNE
EVQNIRTSLTAEQQTNFNTVLAREKMKKENIINDLSDKLKMLTEQQEKDKDLIETLSEDR
ARLLEEKKKLEEEVNKLRSSNLSPSTYLAATSEACGACAADVPTDTERLASDIALEGRMD
STMETSMMAVHENIHMSEEKQRIMLLERTLQLKEEENKRLNQRLMSQSMSSVSSRHSEKI
AIRDFQVGDLVLIILDERHDNYVLFTVSPTLYFLHSESLAALDLKPGECASGASRRPWVL
GKVMEKEYCQAKKAQNRFKVPLGTKFYRVKAVPWNKKV
NT seq
4797 nt
NT seq
+upstream
nt +downstream
nt
atgaagctatatgtatttctggtcaacactggaactactcttacctttgacacagagctt
gctgtacaaaacgtggctgatctgaaacatgcaatacaagcaaagtataagattgccatt
cagcaccaggtattggtagtcaatggaggagagtgtatggctccagacagaagagtgtgt
agttacagtgctggaacagacaccaacccaattttcttattcaacaaagaaatgattttg
tgtgagcgtccaccagccattcccaaaaccacattttcagcagagaatgagatggaattg
aaagtggaagaatctctcatgatgcctgcagttttccatacagtggcatcacgaacacag
cttgctgtggaaatgtacgaagttgccaagaagctttgctcgttttgtgaaggtctggta
cacgatgaacatcttcagcatcaaggctgggctgccataatggccaacttggaagactgt
acatactcttatcaaaagctgcttttcaagtttgaaaatgtatattcaagctatttgcag
tccatagaagatattaagttgaaacttacacacttgggttctgctgtctctgtcatggcc
aagataccactgctggagtgcctaacaagacatagttacagggagtgtttaggaagattg
gattcatcagcagagcatggagtggcggaaagtgaagaaactgagcatgggaaatcttct
gaactggtgctttattctgatgtatctaaagtgaacaataaatcaatgttagcatcattt
tgcaagtcagttgaacattcagctttagaaggcacaaatcccgaaaatgtaaaagacgat
aaggagtctggtcaaaatactactgtccaggacaatgaaacatcagtagaactgaaagat
gatgatcagccttccttcaatgtgtctttattagactggataaatgttcaagacagacct
aatgatgttgaatcactggtcagaaaatgttttgattctatgagcaggcttgatccaagg
atcatccagccctttttggcagaatgtcgacaaactattgccaaactagataatcagaac
atgaaggctattaaaggccttgaggataggctctatgcattggatcaaatgatagcaagt
tgcagcagactggtaaatgaacaaaaagaacttgctcagggatttttggctaatcagaag
agagctgagaacttgaaagatccttctgtgctacctgatttgtgtttgagtcatgcaaat
cagttgatgattatgttaactaatcacagaaagctgttagacattaaacagaaatgtacc
actgccaagcaggagcttgcgaataatctacaagtcagactaaagtggtgttgttttgta
atgcttcatgctgaccaagatggagagaaactgcaagcattgcttcgtcttgtgacagaa
ctcttagagagggtcaaggttgtagaggctctcagtactgttcctcagatgtactgttta
gctgtcgttgaggttgtgaggagaaaaatgttcataaaacactacagggagtgggcaggt
gctttaataaatgatgggaaacacctatatgaagctgaaagggcaaaaagagaatctttt
ggtaaactgttcaggaagtcttttctaaggaatcgcttgttcagaggacttgattcctgg
cctccatccttttgtacaagaaaacctcgcagatttgacagtgagcttccagatatctcg
ttaagtgacttgcaatttttgcagtctttttgtccttcagaagttcagccgttactcagg
gttccaatactttgtgactttgaacctcttcaccagcatgtacgtgctttacataacctg
gtaaaagcagcgcagagtttggatgaaatgtcacaaaccattactgacctgctgaatgaa
caaaaggcttccaatagtcaaacatcaccacagtctgctactacaccaaggatggaaagt
acaacaggaaccacaattgctacctcttccagaactcctccatcgctcagtcttcagggt
cccctgtgtcctcctgtgtgtccccctgctccactagaggaattgtcaccagacagcatt
gatgctcatacatttgattttgaaactattgcccacccgaacctggagcaagctctcaag
caaggatcattggacttggattcattagcagaaagtccagaatctgactttatgtcagca
gtaaatgaatttgtcatagaagaaaatccagtctctcctaacgctataagtgatccacag
agtcctgaaatgatggtggaatctctttattcttcagttatcaatgcaatagatagtaga
cgtatgcaagacacgggttcttgcgtaaaggacatttcagtagaaaatgcttctcgtagt
gtttgcatggagaagtgtaaggtaattgctcaagattcaaaagtacgtctaagaggtata
aaagaagatctttgccactttagaacacttgtacaaaaagaacagtgtgacttttctaat
tctttaaaatgcacttcattagaaatagtaaatactattgaaaaggtaaaactttcactt
gaaaaaacactaaaagataaacatcaaaaagaactgcagtctctgaaaagtgaatatgaa
accaaaattaataaattactggaggatgatgaggaaagcaaaaaaaagattgtaaagtta
aaaggtgacttgttaggccttgaagaagtacttcagaataagaacaatgaatttgcgatg
gtgaaaaatgaaaaggaagctgtagtttcccttcagaatgaaaaagatcagaagctacat
gaattggaatgccaaatggagacacagaattctgaaattaagaaactgagacagtcacgt
gagatagtactcgaagacttgaaaaaacttcatgttgaaaatgatgaaaaactgcagctc
ctgagggcagaactccagagtttagaacaaagccgtttaaaagaactggaaaacaacctt
caggccaggcatttacaggaatttgagaaggtgcttgctgagcacaaggacagtttagat
caattaaaaaaagagaaccagcatagacttgaacaaatgcaggaatctcatgcagcaatt
gtgcaagagaaacaacagcaggtagaagagttaaaacttaaagtttcagatctgtctgat
ttgaggtgtaaattagaagttgaacttgccctgaaagaagcagaaactgatgaaatgaag
cttctcttggaagaaagcagaaaccagcaacaagagaccttaaaatctcagattgataag
gaaactgaaagcttaaaaaaagagatagagaaattaaacagtaagatacaagttagcagt
gatgaatatcaagtgggattatcagaactaagaactttaatgacaattgagaaagatcaa
tgcatttccgagctggtagacagatatgaagaagaatcaaatttgcttagaactgaacta
aacaaagtaacagttttgcatcaaaaaacttctgaagcagaaaaaagactttcagatcaa
ataacagaactgcagtgtaagttagagttggaaaaaaatgccctagaaaaggaaaaaaca
gaaaaaatggcactttgtgagcagcaggaaaaatatgaagctatcatccataggcttaag
gaagagaaagatctgttagtatctaaccaagagcaagacaagcagttgctgattcagaaa
ctcaattctgaaaaagaagatgccgtacaaactgcttgtaaagaatttgaattacaaaag
gaagctgttgaaaaagggcttttggaaaaaatacaacaacttgagatgcaagtaaatcag
agtcctcccactgaatcatctgctgaatcaagcttggttgctgaacttcaagaaaagctt
caggaagaaaaaatgaaattcttggagcagcttgaagaacaagaaagaagaaagaatgaa
gaagtgcagaacattagaacatctctaactgcagaacagcagaccaactttaacactgtt
ctagcaagagaaaaaatgaagaaagaaaatataattaatgatcttagtgacaaattaaaa
atgctaacagagcagcaagaaaaagataaggatttgattgaaacactttctgaagatcga
gctcgtttacttgaggaaaagaaaaagcttgaagaggaagtcaataagctgagaagtagt
aatctttctccatcaacctacttagcagcaacttcagaagcttgtggagcctgtgcagct
gatgttcccactgatacagagagattggcttctgacattgcacttgaaggaaggatggac
tctaccatggaaaccagtatgatggctgtgcatgaaaatatccacatgtctgaagaaaaa
cagaggatcatgttgttagaaagaactttgcagttgaaagaagaggagaataagagatta
aatcaaagattgatgtcccagagcatgtcatcagtatcctcaagacattctgaaaaaata
gcaattagagattttcaggttggcgatttggttctcataatcttagacgaaagacacgac
aattacgttttatttactgttagtccaaccttgtatttcttgcactctgaatctcttgct
gcactggacctcaaaccaggtgagtgtgcttcaggtgcatctaggagaccttgggtgctg
ggaaaagtgatggaaaaggaatattgccaggcaaaaaaggctcaaaacagatttaaagtt
cctctgggtacgaaattctacagagtgaaagcagtaccgtggaacaagaaagtataa
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integrated database retrieval system
