Lagopus muta (rock ptarmigan): 125690656
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Entry
125690656 CDS
T09141
Symbol
ZCCHC2
Name
(RefSeq) zinc finger CCHC domain-containing protein 2 isoform X1
KO
K22700
Zinc finger CCHC domain-containing protein 2
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09190 Not Included in Pathway or Brite
09194 Poorly characterized
99996 General function prediction only
125690656 (ZCCHC2)
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Gene cluster
GFIT
Motif
Pfam:
zf-CCHC
Motif
Other DBs
NCBI-GeneID:
125690656
NCBI-ProteinID:
XP_048795238
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All DBs
Position
3:79085439..79126996
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AA seq
1187 aa
AA seq
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MLKMKLPLKPTSHRAAAEEAAAAALGLKEAGAAPDCHPSPPPPQQQPQPQQVPRAPGRGG
AAAGRGCGLERPSQLHGLGPGPGPGPGPPPPAFPGGSGPGPAAARTDKETVYEWFGLVLG
SAQRLEFMVGLLDLCNPLELRFLGSCLEDLARKDYHCLRDSEAKANGLSDPGQLGDFRDP
AVRSKLIVYLALLGSENREAAGRLHRLLPQVDSILQSCPARRPRAGAAEEEGAEDEEEVV
MVMDGAGENGQGPLPAAQGLGFGAQEELLLLFTMASLHPAFSFHQRVTLREHLERLRRAL
CGDQEEEEGFGRHRAQDDFSRSDCTSGNETSLLERTTAPHDGLPMASHRPQREAVHIEKI
TLKGVPRKRADKHLEYTFKVTWSDLSVTCVTKTHQELQEFLLKLPKELSSEAFDKTILRA
LNQGFQKREERRHADLEPIIRQLFSNTSQAFLQNQRVYNFFQSISSESLHTHSNLQPSLK
TVKAPEHFKEDSSEASSQEEDVMQHAAVHKKHNGKSPVANSTSSAKCSSLDSLNIQHSEQ
NGVMDWRRKTCIVQQHPEHCTNILDQHTGEKRSLSAVSKKKGKPQLEKEKAKKAECRLNN
RTNGVRVAASQHIRAGTAKDLNLDTGSGHDTCGETSSESYSSPSSPRHDGRESFDSEEEK
DRDTDSNSEDSGNQNAARFTGYSAVSSSNMNKSSAQISSANNENGSLSEDPLNAKFQHIS
FMPALHCVMHSTAQKPEAVVPPPIPADGKTMGMLVTTPVAVSPVRESANSPPGGMGPVTS
GEPEKRLELMASPLPVPSTFLPHSVQPGSPALHLAIHRLKMPSPQGSSESCTVNGPQQPT
GNLSIGSPNTAFIPVHNPGSFPGSPVPTTDPITKPASQVVGLNQMVPHIEGNPGAIPQPT
NLKVVLPAAGLSTAAPPPPPASYALPGSPHATSVLPNQNTNVLNTVAASSPPQSAGLGVG
QIQSSVPPAIPTHTPGPAPSPSPALTHSTAQSDSTSYINAVGNNNTNGTMLPPQQLGSGP
CGSCGRRCSCGTNGSLQINSYFYHNPLHGQVYRVPSFFTLPSLCNGSYLNQAHQSNGTQL
PFFLPQSPYANGLMHDPVMGSQANYGMQQMAGFGRFYPVYPAPNVVANTNGSGPKKNGNV
SCYNCGVSGHYAQDCKQSSMEASQQGTYRLRYAPPPPPSNDTLDSAD
NT seq
3564 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagatgaagctgcccctgaagccgacgagccacagggcggcggcggaagaggcg
gccgcggcggcgctggggctgaaggaggccggcgcggccccggactgccacccctcgccg
ccgccgccacagcagcagccgcagccgcagcaggtgccccgggcgccgggccgcggggga
gccgccgcggggcgggggtgcgggctggagcggccgagccagctacacggcctggggccg
gggccggggcccggccccggcccgccgcctcccgccttcccgggcggctccggccccggc
ccggcggcggcccgcaccgacaaggagacggtgtatgagtggttcgggctggtgctgggc
tcggcgcagcggctggagttcatggtggggctgctggacctgtgcaacccgctggagctg
cgcttccttggctcctgcttggaggacctggcccgcaaggactaccactgcctccgcgac
tcggaggccaaggccaacgggctgagtgaccccgggcagctgggcgacttccgcgacccg
gccgtgcgttccaagctcatcgtctacctggccctgctgggctccgagaaccgtgaggcg
gccggccgcctgcaccgcctcctgccccaggtggactccatcctgcagagctgcccggcg
cggcggcctcgggcgggcgccgccgaggaggagggggccgaggacgaggaggaggtggtg
atggtgatggacggggccggagagaacggacagggccctctccccgccgcccagggcctg
ggcttcggcgcgcaggaggaactgctcctgctcttcaccatggcctcgctgcacccggcc
ttctccttccaccagcgggtcacgctgcgagagcacctagaacgcctgcggagggccctg
tgcggggaccaggaggaggaagagggcttcggccgccaccgggcccaggatgacttttcc
cgcagtgattgcacgtcaggtaatgagaccagtttgctagaacggaccacagcacctcat
gatggactgccaatggcttcccatagacctcagcgagaagctgtacacattgagaagata
accctgaaaggagtaccaagaaaaagggctgacaaacatctggagtacacattcaaagta
acgtggtccgacctttcggtaacgtgtgtaacaaaaacacaccaggagcttcaggaattc
ctactaaaacttccaaaggaactgtcttctgaagcatttgacaagaccattttaagagca
ctaaatcagggttttcagaagagggaagaacgaaggcatgctgatcttgagcccataatc
aggcagctattttcaaatacatcacaagcttttctgcagaatcagagagtatacaacttc
ttccaatcaatttcatcagaatctttgcacactcacagtaacttacaaccctctttgaag
acggttaaagcaccagaacacttcaaggaggacagttcagaagcttcaagtcaggaggaa
gatgtaatgcaacacgcagcagtccacaagaaacataatggaaaaagtcctgttgccaac
agcactagcagtgcaaagtgttcttcactggatagccttaacatacagcactctgagcaa
aatggggtaatggactggagaaggaaaacctgtattgtccagcagcacccagagcactgt
acaaacatacttgaccagcatacaggggaaaaacggagcttatctgcagtaagcaagaag
aagggaaagccacagctggaaaaggagaaagcaaagaaggctgagtgccggctgaataac
aggacaaacggagtcagagttgcagcatcacagcacatccgtgcagggacagcaaaagat
ctgaatttggacactggatctggtcacgatacgtgtggagaaacatcatctgaaagttac
agttctccttctagtccacgacacgatgggagggaaagctttgacagtgaagaagaaaaa
gacagagacacggacagcaattctgaggactctggaaatcaaaatgcagccaggttcaca
ggctacagtgctgtcagttcctcaaacatgaacaaatcgtctgctcagatctcttcagcg
aataacgaaaacggaagcctttcggaagatcctttgaacgcaaagtttcaacacatctcc
ttcatgcctgccttacactgtgtgatgcacagcactgcccaaaagcctgaagcggtcgtc
ccgccccccatacccgcagatgggaagacgatgggaatgctcgttaccacgcctgttgct
gtctcaccggtgagagagtccgcaaattcacctcctggtggaatgggcccagtgacttct
ggcgagcctgagaaacgccttgagctgatggcttcccctttgccagtcccatccactttt
ctcccgcattctgtccagcctggtagccctgctttgcatttggcaatacacagattgaaa
atgccctctccacagggatcgtcggaaagttgcacggttaatggaccacagcagccgaca
ggaaacttaagtattggatcaccaaatactgcctttatcccagtccacaatccaggtagt
ttcccaggatccccagttcctactacagatcccatcacaaaacccgcatcccaggtggta
ggactgaatcaaatggtgcctcacattgagggaaacccaggagcaatccctcagcctacc
aatctgaaggtagttcttccagcagctggtctctccacagcagcaccgccacctccacca
gcttcgtacgctttgccaggcagtcctcatgctaccagcgtgttgcccaaccagaacaca
aacgtgctgaacactgtagcagcttcctcaccacctcagtcagctggtttaggtgttggt
cagatccagtcctccgttcctcctgcaattcctacgcacacgccaggccctgcccctagc
ccgagccccgctttaacacacagcactgcacagagcgacagcacatcctacataaacgct
gttggaaataataacactaacgggacaatgttacctccacagcagctgggatctggtcct
tgtggttcttgtggacgtaggtgtagctgtgggaccaatggaagccttcagattaatagc
tatttttatcataacccacttcatggacaagtctacagagttccatctttcttcactctg
ccatcactttgcaatggcagctacctcaatcaagcacatcaaagcaatggaacgcaactt
cctttcttcctgcctcagtctccgtatgcaaacgggcttatgcatgacccagtaatgggg
agccaagccaactatggtatgcagcagatggcaggatttgggaggttctatcccgtatat
ccagcacctaacgtagttgccaacacaaatgggtcaggacccaagaagaatgggaacgtt
tcatgttacaattgtggtgtaagtggacactatgcgcaggactgtaagcagtcatccatg
gaggccagtcaacaaggcacttacagactgagatacgcacctccccctcccccttccaat
gataccttggattctgcagactga
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