Lagopus muta (rock ptarmigan): 125690846
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Entry
125690846 CDS
T09141
Symbol
VCPIP1
Name
(RefSeq) deubiquitinating protein VCPIP1
KO
K11861
deubiquitinating protein VCIP135 [EC:
3.4.19.12
]
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lmut01002
]
125690846 (VCPIP1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lmut04121
]
125690846 (VCPIP1)
Enzymes [BR:
lmut01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
125690846 (VCPIP1)
Peptidases and inhibitors [BR:
lmut01002
]
Cysteine peptidases
Family C64
125690846 (VCPIP1)
Ubiquitin system [BR:
lmut04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
125690846 (VCPIP1)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
VCIP135_N
OTU
OTU1_UBXL
ubiquitin
Motif
Other DBs
NCBI-GeneID:
125690846
NCBI-ProteinID:
XP_048795535
LinkDB
All DBs
Position
3:34041692..34058237
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AA seq
1216 aa
AA seq
DB search
MSQPRQQPPPPPSPQQQPQPPPPAAAKKRERRIFSGTCPDPKCQARLFFPAHGPQGAGSI
ECTDCGQRHEQRQLLAVEEVTDPDLVLHNLLRNALLGVSGAGPPRRNTELVKVLGLSNYH
CKLLAPILARYGMDKQTGKAKLLTEMNQGDIFDCSLLGDRAFLIEPEHVETVGYGKDRSG
SLIYLHDTLEDIKKANNSQECLIPVHVDGDGHCLVHAVSRALVGRELFWHALRENLKKHF
EENLSHYKALFHDFIDVAEWEDIINECDPLFVPPEGVPMGLRNIHIFGLANVLHRPIILL
DSLSGMRSSGDYSATFLPGLVPLEKCMGKDGMLNKPICIAWSSSGRNHYIPLVGIKGAAL
PKLPRKLLPKAWGVPQDLIKKYIKLEEDGGCVIGGDRSLQDKYLMRLVAAMEEVFMSKHG
IHPSLVADVHQYFYRRTGVIGVQPEEVTAAAKKAVMDNRLHRCLMCGALSEHHVPPEWLA
PGGKLYNLAKNTHGQLRPDKNYSFPLNNLVCSYSPAKDVLVPDYSLSSLTTCNWCHSNLV
RRVREDGSVSYLDGDRTNTRSTGGKCGCGFKHYWEGKEYDNLPEAFPITLEWSGRVVRET
VYWFQYESDTSLNSNVYDVAMKLVTKHFPGEFGSEILVQKVVNTILHQTAKKNPDDYTPV
NIDGAHAQRAGEVQQGQELESQLPTKIILTGQKTKTLHKEELNMSKTERTIQQNIADQAS
VMQKRKSEKVKHEHKGQPRTVSPGAVREGPSSAPATPTKTPYSPTSTKEKKIRITTNDGR
QSMLTLKCTTTFLELQESIAREFNIPPYLQCIRYGFPPKELLPPKEGMENEPVPLQHGDR
IAIEILKGKEESSQPAAAHSAHAVKHDDVAVTSKISSKELQEQVDKEMYSLCLLATLMGE
DVWSYAKGLPQLFQQGGVFYSIMKKTTGLVDGKHCTFPHLPGKNFVYNAAEDRLELCVDA
AGHFPIGPDVEDLVKEALSQVRAEAASRSREASPSHGMLKLGSGGVVKKKSEQLHNITAF
QGKGHSLGTASGSQQHDQRARETPLLRKHSTETDFSPAKIEPSVFPAASGKSELIRIAPG
VVTMRDSRQLDPTLIEAQRKKLQEMVSSIQASMDRHLRDQNTEQSAAVDVSQRKVEAVSS
TAKTGSFQAGLPEPFSAPGGTEHLNIESAGDNMVNSVGTTFPARSKAQKGNSVEELEEMD
SQDAGISNVTEPMDHS
NT seq
3651 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagccccggcagcagccgccgccgccgccgtctcctcagcagcagccgcagccg
ccgcctccggccgccgccaagaagcgggagcggcgcatcttctcgggcacctgccccgac
cccaaatgccaggcgcggctgttcttcccggcccacgggccgcagggcgccggcagcatc
gagtgcacggactgcgggcagcggcacgagcagcggcagctgctggcggtggaggaggtg
acggaccccgacctggtgctgcacaacctgctgcggaacgcgctgctgggcgtcagcggc
gccgggccgccccgcaggaacaccgagctcgtcaaggtgctgggcctctccaactaccac
tgcaagctgctggcccccatcctggcccgctacggcatggacaagcagacgggcaaggcc
aagctcctcacggagatgaaccagggagacatcttcgactgctccctgctgggggaccgc
gccttcctcatcgagccggagcacgtcgagaccgtcggctacggcaaggaccgctccggc
agcctcatctacctgcatgacactctggaagacatcaagaaggccaacaacagccaggag
tgcctcattcccgtccacgtggatggagacggccactgtctggtccatgcggtctcacgg
gcgctcgtgggcagggaactgttctggcacgctctgcgagagaacttgaagaagcatttt
gaggagaacctgagtcactacaaggcgctcttccacgattttatcgacgtggctgagtgg
gaggacatcatcaatgagtgcgacccgttgtttgttcctccggaaggtgtgcccatgggc
cttaggaatattcacatctttggcctggccaacgtgcttcatcggcctatcatcctgtta
gactcactgagcggaatgcgaagctctggagactattcagcaacattcctccctggtctg
gtacccctagaaaaatgtatgggaaaagatggcatgttgaacaagccgatttgcatcgcc
tggagtagttcaggacgtaaccattatattcctctggttggaataaaaggtgctgcttta
cctaaactgcctagaaagctcctgcctaaagcctggggagttccacaagatctcatcaaa
aaatacatcaagttagaggaggacggtggttgtgttatcggaggagacagaagcttgcaa
gataagtatttgatgaggctggttgctgcaatggaggaggttttcatgagtaaacacggt
attcaccccagtcttgtagctgatgtgcatcagtacttctacagaaggactggggtaata
ggagtccagcctgaagaagtcacggcagctgccaaaaaagcagtgatggacaaccgcctt
cacaggtgcctgatgtgtggagccctttcagaacatcatgtgcctccagagtggttggct
ccagggggaaaattgtataatctggcaaaaaatacccacggtcagctgcggcctgacaaa
aattacagctttcccctgaacaatttggtgtgttcttacagccctgcaaaggatgtgctg
gtaccagactacagcctgagtagtttgactacgtgtaactggtgtcacagtaacttagtg
cgtcgtgtccgagaagacggctctgtttcgtatttggatggagacagaactaacactagg
tctacgggtggcaagtgtggctgtggattcaagcactactgggaaggtaaagagtatgat
aacctccccgaagcgtttcccattactcttgagtggagtggaagagtggtgagagagacg
gtctactggtttcagtacgaaagtgacacctctttgaacagcaacgtgtatgatgttgcc
atgaagcttgtcaccaaacacttccctggtgagtttggtagtgagattcttgttcagaaa
gttgtcaacacgatattgcatcaaactgccaaaaagaaccctgatgattatacccctgta
aatattgacggtgctcatgcccaaagagctggggaggtacagcaaggacaagagttagaa
tcacaacttccaaccaaaattattttgactggacagaagacaaaaactttgcacaaggag
gagttaaatatgagcaaaactgaaagaactattcagcagaacattgcagaccaggcctct
gtgatgcagaaacggaaaagtgaaaaagtaaaacatgagcacaaagggcaaccgagaact
gtgtctccaggggctgttcgtgaggggccatcatctgcacctgctacgccaacaaaaacc
ccgtattcgccaacatctacaaaggaaaagaaaatccgaataacaacgaatgatgggagg
cagtccatgcttaccctgaagtgcactaccactttcttggaactacaggaaagcatagct
agagagtttaatattcctccatatttgcaatgtattcgctatggctttcctcctaaagag
cttttgcctcccaaagaaggcatggaaaatgaacctgtgcctttgcagcatggtgacaga
attgccatagaaatcctgaaaggtaaggaggagagcagccagcctgctgcagcacactca
gcccacgccgtgaaacatgacgatgtggcagtgaccagtaaaatctcatcgaaggagctg
caggagcaagttgataaggagatgtactctctgtgtcttctagcaacactgatgggagaa
gatgtctggtcttatgcaaagggccttcctcaattgtttcagcagggtggagtattctac
agcataatgaagaaaaccacaggtttggtcgatggcaagcactgtacttttccacatctg
cctggtaaaaactttgtgtacaacgcggcggaagatcgattagagctgtgtgtggatgct
gctgggcactttcctatcggtcctgatgtcgaagacttggttaaagaggccttaagtcaa
gtgcgagcagaagctgcttcacgaagcagggaagcaagtccatctcatggaatgctgaag
ctgggtagtggtggagtagtgaaaaagaaatctgaacagctacataacataactgcattt
caaggaaagggccattcgctaggaactgcatctggtagtcaacaacatgatcaaagagcc
agggaaacaccacttttaagaaagcatagtacagaaacagacttcagtcctgctaaaatt
gagccttctgtattcccagctgcttctggtaagagcgagctgatccgaatagctcctgga
gttgtgacaatgagagacagcaggcagctcgaccctactttgattgaggcacagagaaaa
aagttgcaggaaatggtctcctctattcaggcttcaatggatagacacttgcgggatcag
aatacagagcagtcagcagcagttgatgtatctcaaagaaaagtagaggcagtgagttca
actgctaaaactgggagctttcaggctggcttgcctgaaccgttttctgcaccgggtggt
actgaacacttgaatattgagtcagctggtgataacatggtgaattctgtgggaacaact
ttccctgcaaggtctaaagcacaaaagggaaattctgttgaggagcttgaggaaatggat
agtcaagatgcaggaattagtaatgtaactgagccaatggatcactcttga
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