Lagopus muta (rock ptarmigan): 125690916
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Entry
125690916 CDS
T09141
Symbol
RAD54B
Name
(RefSeq) DNA repair and recombination protein RAD54B
KO
K10877
DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
125690916 (RAD54B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lmut03400
]
125690916 (RAD54B)
DNA repair and recombination proteins [BR:
lmut03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
125690916 (RAD54B)
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
DUF4771
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
125690916
NCBI-ProteinID:
XP_048795637
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All DBs
Position
3:23410171..23471959
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AA seq
915 aa
AA seq
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MRRSAAPSQVLGNVAKKPRFIPPGKSNAVCPKIENEETDQDVKSKEIGEKHGSVSLFSDM
FSENQNKNFTQSVESSGKVKSAKAWNSTSKCSKLEMKTHSAPKADAMYLPTSGMAKEAAA
QEEPDCLTKYFSVMWCKASKKKHKKWEGDAILITKGKSVILKDMEGKDIGRGTGYKSKEL
DSLEEGQTLMIGGKEIEVMGVISADDFSSGRCFQTGIATHDTALPQTTMKPFCKPIKSAC
QPSTKENILLSSQSRKPRHNPNDANSLVMPRPNASHQCMFNKAGLPVVDVVVDPYVANNL
RPHQREGIVFLYECVMGMRVSGRFGAILADEMGLGKTLQCISLVWTLLRQGVYGCKPVLK
RALIVTPGSLVKNWKKEFQKWLGSERIKVFTVDQDHKVEEFTNSPLYSVMIISYEMLLRS
LDQIQAIEFNLLICDEGHRLKNSSIKTTTALTSLSCERRIILTGTPIQNDLQEFYALIEF
VNPGVLGSLSTYRKIYEEPIVRSREPSATKEEKDLGEKRAAELTRLTGLFVLRRTQEVIN
KFLPPKKENIIFCQPTALQLELYRKLLSSHVITSCLQGRLENSPHLICIGALKKLCNHPC
LLFKAVKEKSCDPNGDEHVESSLYEGLTDVFPQGYTSDIFSETDSGKLQVLVKLLAAIRE
LSSSERVVLVSIYTQTLNILQETCKRYGYSYTRLDGNTPVSQRQQIVDSFNCKFSPAFIF
LLSSKAGGVGLNLVGASHLILYDIDWNPATDIQAMARVWRDGQKHTVHIYRLLTTGSIEE
KIYQRQISKQDLSGAVVDLSKTSEHIHFSVEELRNLFTLHENSSCVTHDLLECDCMGNKD
HQNPSSEKPSVSRSCQLRQDQEKHNLKKPLSMSQLMQWKHFSGQHQALPDPFLEKIKENV
SFFFQNVTNPTSPTQ
NT seq
2748 nt
NT seq
+upstream
nt +downstream
nt
atgaggcgatcagcagctccaagtcaagtgctaggaaatgtagccaaaaagccaaggttt
ataccaccaggaaaaagtaatgcagtttgtcccaagattgaaaatgaggaaacggaccaa
gacgtgaaatcaaaggagataggtgaaaaacatggaagtgtttcactgttttctgacatg
ttcagcgagaatcagaataaaaattttacacagtctgttgagtcatctggaaaagtaaag
tctgcaaaagcatggaacagcactagtaagtgcagcaagttggaaatgaaaacacacagt
gcacccaaggctgatgcaatgtatttgccaacatcagggatggcaaaggaagcagcagcg
caggaagaacctgactgcctcacaaagtatttcagtgttatgtggtgtaaggcatcaaag
aagaagcacaagaagtgggaaggggatgctattcttataacaaaaggaaagtcagtaata
ttgaaagacatggaaggcaaagacattggcagaggtactggatataaatctaaagagtta
gacagtcttgaggaaggtcaaacactgatgattggaggaaaagaaattgaagtgatgggt
gtaatttcagcagatgacttcagcagtggcaggtgttttcagactggaatagcgactcat
gacactgctttacctcagactaccatgaaaccattctgtaagccaatcaaaagtgcctgc
cagcccagtactaaagagaatatcctcctcagttctcagagccgcaaacctcgtcacaat
ccaaatgatgctaattctctagttatgccaagaccaaatgcaagtcatcagtgcatgttc
aacaaggctggtttacccgtggtggatgtagtggtggatccttacgttgcaaataatctc
cgaccacatcagagagaaggaattgtatttctatatgaatgtgtaatgggaatgagagtt
agtggcagatttggagctattcttgctgatgaaatgggcttaggaaaaacattgcagtgc
atttcacttgtctggactcttctgcgtcaaggggtctatggatgtaaacctgtactgaag
cgagcactaattgtcacccctgggagtctggtaaaaaactggaaaaaagaatttcagaaa
tggttgggaagcgaaaggatcaaagtctttacagttgatcaggaccataaagtagaagaa
ttcaccaattctcccctttattcagttatgataatcagctatgagatgctactacgatct
ctggatcaaattcaggctatagaatttaacctcctgatctgtgatgaaggacatcgtctg
aaaaatagctctattaagacaactacagccctcactagtctgtcttgtgagaggagaatt
atccttactggtactccaatccaaaatgacttgcaagaattttatgctttaatagaattt
gtaaatccaggagtacttggttctttatccacatacagaaagatatatgaggagcccatt
gtcagatccagagaaccttcagcaacaaaggaggaaaaggatttaggagaaaaaagagca
gcagaactcacacgcctcactggactctttgttcttaggagaacacaagaggttataaac
aaatttcttccaccaaaaaaggagaacattatcttctgccaaccaacagcgctgcagctt
gagttgtatcgaaaactgctcagttctcatgttattacctcctgtctacaaggcaggcta
gaaaatagtcctcacctaatatgtataggagctttgaaaaaactttgcaatcatccatgt
cttctgtttaaagctgtaaaggaaaaatcctgtgatccgaacggcgatgagcatgttgag
tccagtctctatgaaggtctaacagatgtctttccacaaggttatacttctgacattttc
tctgaaactgattcaggaaaattgcaggtgctggtgaagttgttagcagcaatccgagag
ctcagctcttctgaaagagttgtactggtatccatttacactcagacactgaacatactg
caggagacatgtaaacgttacggatattcttatactagacttgatggaaatactcctgtc
tcccagaggcaacagattgttgatagttttaattgtaaattcagtccagctttcatcttc
ttgctgagttcaaaagctggtggagtgggactgaatctggttggagcttctcacttgatc
ctttatgatatcgactggaatccagctactgatattcaggcaatggccagagtgtggaga
gatggtcagaaacatactgtacatatctacagacttctaaccacaggttcaatagaagaa
aagatttatcaaagacagatcagcaaacaggacctttcgggggcagttgtagacctttcc
aagacatctgaacatatccatttttctgttgaggagctcagaaatctctttacacttcat
gagaattccagctgtgttacccatgacttacttgaatgtgattgtatgggaaacaaagac
catcaaaatccttcctcagaaaagccttcagtgtctagaagttgtcagctcagacaagac
caggagaagcataatttaaagaaacctctctccatgtcacagctgatgcaatggaagcat
ttctctgggcaacatcaagctctacctgatccttttcttgaaaagataaaggaaaatgtt
tctttctttttccagaatgtaaccaatccaacttcccctacccaataa
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