Lagopus muta (rock ptarmigan): 125690953
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Entry
125690953 CDS
T09141
Name
(RefSeq) cadherin-7 isoform X1
KO
K06799
cadherin 7, type 2
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lmut04515
]
125690953
Cell adhesion molecules [BR:
lmut04515
]
Cadherins
Major cadherins
125690953
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_CELSR2_9th
Fibulin_C
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
125690953
NCBI-ProteinID:
XP_048795729
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All DBs
Position
3:53212846..53298132
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AA seq
785 aa
AA seq
DB search
MKLGKVEFCHLLQIIALFLCLSGMNQAEPSRSKSKPYFQSGRTRTKRSWVWNQFFVLEEY
MGSDPLYVGKLHSDVDKGDGSIKYILSGEGASSIFIIDENTGDIHATKRLDREEQAYYTL
RAQALDRLTNKPVEPESEFVIKIQDINDNEPKFLDGPYTAGVPEMSPVGTSVVQVTATDA
DDPTYGNSARVVYSILQGQPYFSVEPKTGIIKTALPNMDREAKDQYLLVIQAKDMVGQNG
GLSGTTSVTVTLTDVNDNPPRFPRRSYQYNVPESLPVASVVARIKAADADVGPNAEMEYK
IVDGDGLGVFKISVDKDTQEGIITIQKELDFEAKTSYTLRIEAANIHVDPRFLSLGPFSD
MTTVKIIVEDVDEPPVFTSRLYSMVVSEAAKVGTIIGTVAAHDPDVSNSPVRYSIDRNTD
LERYFNIDANSGVITTAKSLDRETNAVHNITVLAMESQNPVQIGRGYVAITILDINDNAP
EFAMEYETTVCENAQPGQIIQKISAIDKDDPPNGHQFYFSLTAEAANNHNFTLQDNKDNT
ATVLTRRNGFRRQEQSVFYLPIFIVDSGSPSLSSTNTLTIRVCDCDADGIAQTCNAEAYI
LPAGLSTGALIAILACVLTLLVLVLLIVTMRRRKKEPLIFDEERDIRENIVRYDDEGGGE
EDTEAFDMAALRNLNIIRDTKTRRDVTPEIQFLSRPTFKSIPDNVIFREFIWERLKEADV
DPCAPPYDSLQTYAFEGNGSVAESLSSLDSISSNSDQNYDYLSDWGPRFKRLADMYGSGP
DCLYS
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atgaagttgggcaaagtggagttctgccatttgttgcagataatagctcttttcctgtgt
ctttctgggatgaatcaagctgaaccctcgaggtccaagtcaaagccctactttcagtct
gggaggacaagaaccaaacgcagctgggtgtggaatcagttctttgtgctggaagaatac
atgggctcagacccactctatgtaggaaagcttcactctgatgttgataaaggagatggt
tccatcaaatacatcttgtcaggcgaaggggcaagttccatttttattattgatgagaac
acaggggatattcacgctacaaagaggctggatcgagaagagcaggcctactacacgctc
cgagcacaagcactagataggctgactaataaacccgtggaaccagaatctgagttcgtc
attaagattcaggacatcaatgacaatgagccaaaatttctggatggtccttacactgct
ggagttcctgagatgtctcctgtgggtacctctgtggttcaagtgacagccactgatgct
gatgatcctacttatggcaatagtgcccgagtggtttacagcatattacaaggacaacct
tacttttctgtggaaccaaagacaggtattatcaaaactgcccttccaaatatggataga
gaagccaaggaccaatatctgctagttattcaagcaaaggacatggttgggcaaaatggt
ggtttatcaggaacaacatcagtaactgtcactctgactgatgttaatgacaacccaccc
cgcttcccacgacgatcatatcagtataatgtcccagaatctttacctgtggcatctgta
gtggccagaataaaagctgccgatgcagatgtgggacccaatgctgaaatggagtataag
attgtagatggtgatggtttgggagtattcaaaatttctgtagacaaagacacccaggag
ggaatcatcacaattcagaaggagttggattttgaagctaaaacaagctataccctgagg
atagaagcagccaatatacatgttgatcctcgcttcctaagtcttgggcccttcagcgac
atgacaacagtgaagataatcgtagaagatgttgatgagccacctgtgtttacgtcacgt
ttatactccatggtggtgtctgaagcagcgaaagtcggcactatcattggaactgttgct
gcccatgatccagatgtctcaaatagtccagtcaggtactcaatagatcgaaacacagac
ctcgagaggtatttcaatattgatgccaacagtggagtcattacaactgccaagtctttg
gacagggaaactaatgccgttcataacattacagtcttggcaatggagagtcagaatcca
gtacagattgggagaggatatgtagccataactatccttgacatcaatgacaatgcccct
gagtttgccatggagtatgagacaactgtctgtgaaaatgctcaacctggccagatcatc
cagaaaatcagtgccattgataaagatgacccaccaaatggtcatcagttctacttcagt
ttaacagcagaagcagcaaataaccataattttacgcttcaggacaacaaagataacact
gcaactgtattaacgagaagaaatggtttccggagacaagaacagtctgttttctattta
ccaatattcattgtggacagcggatcaccttcacttagtagcactaatactctcaccata
agagtctgtgattgtgatgcagatggtattgctcagacatgtaatgcagaggcatacatc
ttgcctgcaggacttagcactggagccctgatagcaatattggcttgtgttttaacactg
ctagttcttgtcttgctgattgtcaccatgaggcgacggaaaaaagaacccctcattttt
gatgaagagagagatatcagagaaaatatcgtcagatatgatgatgagggtggtggagaa
gaagacactgaggcttttgacatggctgccttaagaaacctcaacatcatccgagacacc
aagaccaggagggatgtgacacctgagattcagttcttgagcagaccgacttttaaaagc
atcccagataatgtaatttttagagaatttatctgggagagactaaaagaagctgacgtg
gacccttgtgcaccaccctatgactccctgcagacatatgcatttgaggggaatggctcg
gtggcagagtctctcagctcattagattcgataagctcaaactctgaccagaactatgat
tacctcagtgactggggccctcgctttaaaaggcttgcagatatgtatgggagtggtcca
gactgcttatactcatag
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