Lagopus muta (rock ptarmigan): 125691032
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Entry
125691032 CDS
T09141
Symbol
CHD7
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 7 isoform X1
KO
K14437
chromodomain-helicase-DNA-binding protein 7 [EC:5.6.2.-]
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lmut03036
]
125691032 (CHD7)
Chromosome and associated proteins [BR:
lmut03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
125691032 (CHD7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Helicase_C
Chromo
ResIII
DEAD
HTH_CHD1_Hrp3
HDA2-3
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
125691032
NCBI-ProteinID:
XP_048795863
LinkDB
All DBs
Position
3:complement(36230359..36357138)
Genome browser
AA seq
3011 aa
AA seq
DB search
MADPGMMSLFGEDGNIFSEGLEGLGECGYPENTVNPMGQQMPMDQGFPSLQSSLHHPPAN
QNQAKLTHFDHYNQYEQQKMHLMDQPNRMISNAPGNGIASPHSQYHNPPVPQVPHGSGAS
GQMGVYPSMQNERHGQPFVDSGSMWGPRAVQVPDQIRAPYQQQQQQPQPTQPPQAPSGPP
GQGHPQHMQQMGNYMARGDFSMQQHGQPQQQRMNQFSQGQEGLNQGNPFIATSGPGHLSH
VPQQNPSMAPSLRHSVQQFHHHPPTALHGESVAHSPRFSPNPPQQGAVRPQTLNFSSRSQ
TVPSPTINNSGQYSRYPYSNLNQGLVNNTGMNQNLGLTNNTPMNQSVPRYPNAVGFPSNS
GQGLMHQQPIHPSGSLNQMNTQTMHPSQPQGTYASPPPMSPMKAMSNPAGTPPPQVRPGS
AGIPMEVGSYPNIPHPQPSHQPPGAMGIGQRNMGPRNMQQNRPFMGMSSTPREMGGHMRP
NGCPGVGLADPQAIQERLISGQQLPSQQQSFQQQMPTCPPMQPHPGIHHQSSPPPHPHHQ
PWAQLHQSPQNTPQKVPVLQHSPSEPFLEKPVPDMTQVSGPNTQLVKSDDFLPSVEPQPQ
QKKKKKKNNHIAAEGPSKSFGKEDFPGGLDSQNLSRNSVDCSQEDKKKKKKPKAKKEPKD
PKEPKEKKEPKTPKVPKTPKEPKEKKAKNTTPKPKTSKKTSNKKTDSETSAAKKKVNKGK
EGSENSDLDKTPPPSPHPEDEDDPGVQKRRSSRQVKRKRYTEDLEFKISDEEADDADAAG
RDSPSNTSQSEQQESADAEGPVVEKIMSSRSVKKKMENGEEVEIEEFYVKYKNFSYLHCQ
WASVEELDKDKRIQQKIKRFKAKQGQNKFLSEIDDELFNPDYVEIDRILDFSRSTDDNGE
PVTHYLVKWCSLPYEDSTWELKQDIDQAKIEEFEKLMSREPEMERVERPPADDWKKSESS
REYKNNNKLREYQLEGVNWLLFNWYNTRNCILADEMGLGKTIQSITFLYEIYLKGIHGPF
LVIAPLSTIPNWEREFRTWTELNVVVYHGSQASRRTIQLYEMYFKDPQGRVIKGSYKFHA
IITTFEMILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQN
TVEELFSLLHFLEPGRFPSETTFMQEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLA
PKEETIIEVELTNIQKKYYRAILEKNFAFLSKGGGQANVPNLLNTMMELRKCCNHPYLIN
GAEEKILEEFKETHNADSPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCL
DILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSRPDSDRFVFLLCTRAGGLGINLTAAD
TCIIFDSDWNPQNDLQAQARCHRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVL
QSMSGRENATNGVQQLSKKEIEDLLRKGAYGALMDEEDEGSKFCEEDIDQILLRRTHTIT
IESEGKGSTFAKASFVASGNRTDISLDDPNFWQKWAKKAELDIDALNGRNNLVIDTPRVR
KQTRLYSAVKEDELMEFSDLESDSEEKPSTKPRRPQDKSQGYARSECFRVEKNLLVYGWG
RWTDILSHGRYKRQLTEQDVETICRTILVYCLNHYKGDENIKSFIWDLITPTADGQTRAL
VNHSGLSAPVPRGRKGKKVKAQSSQPMLQDADWLTTCNPDVLFQEDSYRKHLKHHCNKVL
LRVRMLYYLRQEVIGDQADRILEGADSSEVDVWIPEPFHAEVPADWWDKEADKSLLIGVF
KHGYEKYNSMRADSTLCFLERVGMPDAKAIAAEQRGTDMLADGGDGGEFDREDEDPEYKP
TRTPFKDEIDEFANSPPEDKEESIEIHPNKHSESNSELGQLYWPNTSTLTTRLRRLITAY
QRSYKRQQMRQEALMKTDRRRRRPREEVRALEAEREAIITEKRQKWTRREEADFYRVVST
FGIIFDPIKHQFDWNQFRAFARLDKKSDESLEKYFNGFVNMCRRVCRMPVKPDDEPPDLS
TMIEPITEERASRTLYRIELLRKIREQVLHHPQLGERLKLCQPSLDLPEWWECGKHDKDL
LIGAAKHGVSRTDYHILNDPELSFLEAHKNFAQNRGTGNANTVSSLHPVGAGCSQTPPIV
PSTPVQEEKSTEQTESKVEGSENPAAKEKSDIKEETDIADKDTKQDCDAEAETGSVKCEL
KDIEMSTDVDPKSISEKGSEEDEEEKLDDDDKSEESSQPEAGAVSQGKNFDEESNASMST
ARDETRDGFYMEDGDPSVVQLLHERTFAFSFWPKDRVMINRLDNICEAVLKGKWPVNRRQ
MFDFQGLIPGYTPTAVDSPLQKRSFAELSMIGQASISGSEDITASPQLSKEDALNLSVPR
QRRRRRRKIEIEAERAAKRRNLMEMVAQLRESQVVSENGQEKVVDLSKASREATSSTSNF
SSVTSKFILPNVSTPVSDAFKTQMELLQAGLSRTPTRHLLNGSLIDGEPPMKRRRGRRKN
VEGLDLLFMSNKRTSLTVEDAEVTKAFEEDMEALPARNIPSPGQLDPDTRIPVINLEDGT
RLVGEDAPKNKDLVEWLKLHPTYTVDMPSYVPKSADVLFSSFQKPKQKRHRCRNPNKLDI
NTLTGEERVPVVNKRNGKKMGGAMAPPMKDLPRWLEENPEFAVAPDWTDIVKQSGFVPES
MFDRLLTGPVVREEGASRRGRRPKSEIAKAAAAAAAVASTSGINPLLMNSLFAGMDLTSL
QNLQNLQSLQLAGLMGFPPGLATAAAAGGDAKNPAAMLPLMLPGMAGLPNMFGLSGLLNN
PITATTGNATTASGQGETEDGASKAEEKKNENEEENKDSEKSTDTVSATDSANGSVSAAT
AATTATATTTTTTNTGLPTNPLAFNPFLLSTMAPGLFYPSMFLPPGLGGLTLPGFPALAG
LQNAVGSNEEKATDKTEGTAFKDEENLEGSDAEESLDKTADSSVLEDEIAQGEELDSLDG
GEEIENNENDE
NT seq
9036 nt
NT seq
+upstream
nt +downstream
nt
atggcagatccaggaatgatgagtctgtttggagaagatgggaatattttcagtgaaggg
ctggaaggtctcggagaatgtggatatcctgaaaacacagtaaatcccatggggcagcaa
atgcccatggatcaaggatttccctctttacagtcatctcttcatcatccccctgcaaat
caaaatcaagcaaagttgacccattttgatcactataatcaatacgaacagcagaaaatg
cacctgatggatcagccgaacagaatgataagcaatgcccctgggaatggtatagcgtct
cctcattcacagtatcacaaccctcccgttcctcaggttcctcatggcagcggtgctagt
ggtcagatgggagtctatcccagcatgcagaacgaaagacacgggcaacccttcgtagac
agtggctcgatgtgggggccgcgggcagttcaagtgccagaccagataagagcaccatac
cagcagcagcagcaacagccgcaaccgacacagccgccacaagcaccctccggacccccc
gggcagggccatcctcagcacatgcagcagatgggaaactacatggctcgtggtgatttt
tcaatgcaacagcacggtcagccgcaacagcagaggatgaaccagttttctcaaggccag
gaaggcctcaatcagggaaaccctttcattgccacctcaggacctggccacttgtctcat
gtgccccagcagaatcccagtatggcaccttctttgcgacattcagtccagcaatttcac
caccatccccccactgctctccatggagaatcagtagcccacagccctagattctcccct
aatcctccccagcagggtgctgttaggccgcaaacacttaattttagttctcggagccag
acggtaccctcacctactataaacaactcagggcagtattctcgatatccttacagtaac
cttaatcagggattagttaataatacagggatgaatcagaatttaggccttacaaataac
actccaatgaatcagtctgtaccaagatacccaaatgctgtaggatttccatcaaacagt
ggtcaaggactaatgcaccagcaacccatccaccctagtggctcacttaaccaaatgaac
acgcaaactatgcacccttcacagcctcagggaacttatgcctctccacctcccatgtca
cctatgaaagcaatgagtaatccagcaggtacgcctcctccacaggttaggcccggtagt
gctggaataccaatggaagttggcagttatccaaatataccccatcctcagccatcacac
cagccccctggtgccatgggaattggacaaaggaatatgggccccagaaacatgcaacag
aatcgtccttttatgggtatgtcttcaacaccacgggagatgggtgggcacatgagacca
aatggttgtccaggcgttggccttgcggatccacaagcaatacaagaacgactaatatct
ggccagcagcttcctagtcaacagcagtcttttcaacagcaaatgccaacctgtcctccc
atgcagcctcatccagggatacatcatcagtcttcaccaccgccacatcctcatcatcag
ccttgggcacagcttcaccagtcaccacaaaacacaccacaaaaagtgcctgtccttcag
cattctccatcggaaccttttttagagaaaccagtgccggatatgactcaggttagtgga
ccgaatacccagctagtgaaaagtgatgattttctgccatcagttgaaccgcagccacag
caaaagaaaaagaaaaagaaaaacaatcacattgctgcagaaggtcccagtaaaagtttt
ggtaaggaagactttcctgggggacttgacagccagaatctaagtaggaactcagtggat
tgctcccaagaagataaaaagaaaaagaaaaagcccaaggcaaaaaaagaaccgaaggat
cctaaagagcccaaggaaaagaaggaacccaagacccccaaagtccctaagacccctaaa
gagccaaaggaaaagaaagcaaaaaataccacgccaaaacccaagaccagcaaaaagaca
agtaacaagaaaacagattcagaaactagtgctgcgaagaaaaaggttaacaagggaaag
gaaggttctgaaaattcagatttggataaaactccaccaccttcacctcatcctgaagat
gaagatgatccaggagttcagaagcgacgctccagcaggcaggtgaagaggaagcgttac
acagaagacttggagttcaagatttcagatgaggaggcagatgatgctgatgctgctgga
agagactctccttcaaatacttctcagtcagagcaacaggaatctgctgatgctgaaggt
cctgttgtggagaaaatcatgagtagtcgctcagtcaagaaaaagatggagaatggagag
gaggtagaaatagaagaattctatgtgaagtacaaaaacttttcttaccttcattgtcag
tgggcatctgtggaagagctggacaaagacaagagaattcagcagaagattaagcggttc
aaggcaaaacagggccagaacaaattcctttcagaaattgatgatgagctttttaatcca
gattatgtggaaattgatcgaatcttggatttttcacgtagcacagatgataatggagag
cctgtaactcattatctggtgaagtggtgttcgctaccttatgaagacagcacttgggag
ctcaagcaagacatcgaccaagctaagatcgaagagtttgagaaactgatgtctagagag
ccagaaatggagcgtgtggagcgacctcctgccgatgactggaagaaatcggagagttcc
agggagtataaaaacaataacaaactcagggaataccagttggagggagtaaactggctt
cttttcaattggtacaacacgcgaaactgcattttagcagatgaaatggggttgggaaag
actatccagtccattacgtttctctatgagatatatttgaaaggaatccatggtcctttc
ttggttattgcaccgttgtccacaattcccaactgggaaagggagttccgcacctggaca
gagttgaatgtggttgtgtatcatgggagtcaagcaagccggcggaccattcagttgtat
gaaatgtatttcaaagatccacagggtcgtgtgataaaaggctcttacaagttccatgct
attatcacaacatttgaaatgattttgactgactgccccgagcttcgaaacattccatgg
cgttgtgtggtaatcgatgaggcccacaggctgaaaaacaggaattgtaagcttttggaa
ggactcaagatgatggatctggagcataaagtgctgcttactggaactcctttgcaaaat
acagtggaagagctatttagcttgcttcactttttggaaccaggtcgcttcccatccgaa
accacgttcatgcaagaatttggggatctgaaaactgaagaacaggtgcagaaactgcaa
gctattttgaagccaatgatgctgagacgtctcaaggaggatgtggaaaagaacctggcc
cccaaagaggaaaccatcattgaagttgagctgacgaatattcagaagaaatactatcgt
gctattcttgagaagaattttgcgtttctctcaaaaggtggaggtcaggcaaatgtacct
aatcttttaaacactatgatggaactaagaaaatgctgcaatcatccgtaccttattaat
ggtgctgaagagaaaattttggaagagtttaaagaaacacacaatgccgactctccagat
tttcagctccaggcaatgatccaggctgctggcaagctagtactgattgacaagctgctg
ccaaaactgaaggctggtggccacagggtgcttatcttttcccagatggtgcgctgcttg
gacatactggaagactacctcattcaaagacggtacccatacgaacgaattgatggccga
gtaagaggcaacttgcgtcaggcagctattgacaggttttcaagacctgattctgatagg
tttgttttcctgctgtgtacaagggcaggaggcttgggcattaatcttactgctgctgat
acctgcatcatttttgattcagactggaaccctcaaaatgacctccaggctcaagcacga
tgtcacagaataggacagagcaaatcagtgaaaatttacaggttgattacaaggaattct
tatgaaagggaaatgtttgacaaagctagcttgaagcttggccttgacaaggctgtgcta
caatctatgagtggaagagaaaatgctacaaatggggtgcaacagctttctaaaaaagaa
atagaagatcttcttcgaaagggagcgtacggtgctctgatggacgaggaggatgaaggg
tctaagttttgtgaagaggatattgatcaaattctcttaaggcgaacacacacaattact
attgaatctgaaggaaaaggctcaacgtttgcaaaggctagttttgttgcatctgggaac
aggacagacatttccttggatgaccctaatttttggcagaagtgggcaaagaaggctgaa
ctggatattgatgctttaaatggaaggaataacctagttattgatacaccaagagtaaga
aagcaaaccagactctacagtgcagtcaaagaggatgaactgatggagttttcagacctg
gaaagtgattccgaagaaaagcctagcacaaagccccgtaggcctcaggacaaatcacag
ggttatgcaagaagtgaatgtttcagggtagagaagaacttgttggtttatggctggggt
cgttggactgacatcctctcacatgggcgctataaacgtcagctaacagaacaagatgtg
gaaaccatctgccggactatcctggtatattgccttaatcattacaaaggggatgaaaat
atcaaaagtttcatctgggatctgatcactccaactgcagatgggcaaactcgagctttg
gttaatcattccggcctgtctgcgccagtgcccagagggaggaaaggcaagaaagtaaaa
gcccagagttcacagccaatgcttcaggatgctgattggctcaccacctgtaatccggat
gtattatttcaagaagacagctatagaaaacatctcaaacatcattgtaataaggtcctg
ctgcgtgtccgcatgctgtactatctacgacaagaagttataggggaccaagcagacagg
atcttagagggtgctgactcaagtgaagtagatgtatggatacctgagccgttccatgct
gaagttcctgcagactggtgggataaggaggcggataaatcccttttaattggagtattc
aaacacggttatgagaagtacaattccatgagagctgattcaacactgtgctttctggaa
cgggttggcatgcctgatgcaaaggccatagctgctgaacagagagggacagacatgtta
gcagatggcggtgatggaggtgaattcgacagagaggatgaagatccagaatataagcca
acaagaactcctttcaaggatgaaattgatgaatttgcaaactcacctccagaagacaaa
gaagagtccattgaaatccacccaaacaagcacagtgaaagcaattctgagttaggccaa
ctctactggcccaacacttcaaccctgactacccgtctgcgtcgcctcattactgcctat
cagcgcagctataaaaggcaacaaatgaggcaagaggcactaatgaagactgaccgcagg
agacgtcggcctcgggaagaagtgagggcactagaagcagaaagggaggctataataact
gagaaacgacaaaaatggacaagaagagaagaagccgatttttatcgtgtagtgtctact
tttggaattatttttgatcctataaaacatcaatttgactggaatcaattcagagcattt
gccaggcttgataaaaagtccgatgaaagcttggagaagtattttaatggctttgtgaat
atgtgtagacgagtgtgccgaatgccggtcaagccagatgatgagcctcctgatctttct
actatgattgaaccgatcacagaagaacgtgcttccagaactttatatcgcatagagctg
ttacggaaaatccgtgaacaggttcttcatcacccacagctgggggagaggctaaagctt
tgccaaccaagcttggatctgccggagtggtgggagtgtggtaaacatgacaaagactta
ctgattggtgctgctaaacatggagtcagtaggacagattatcacattctgaatgatcct
gagctgtcttttcttgaggcccacaaaaactttgctcaaaacagagggacgggtaatgca
aatactgtctcttctctacaccctgtgggtgctggctgcagtcaaacaccacctattgtc
ccatccacaccagtacaagaagaaaaaagtacagaacaaacggagtctaaagttgaagga
tctgaaaatccagcagccaaagaaaaatctgatatcaaggaagaaacagatattgctgat
aaagacactaagcaggattgtgatgctgaggctgagactggctctgttaaatgtgaattg
aaagatatagaaatgagtacagacgtagacccaaaatcaatttctgaaaaaggttcagaa
gaagatgaagaggagaaactggatgatgatgacaaatcagaagagtcctcccaacctgaa
gcaggagcagtttctcagggtaagaattttgatgaagaaagcaatgcctctatgagtacc
gcaagggatgaaacgcgtgatggattctacatggaagatggggatccttctgtggtccag
ctgcttcatgagagaacatttgccttttctttctggcctaaggaccgagtaatgatcaac
cgattagacaacatctgtgaagcagtgctgaaagggaagtggccagtaaataggcgccag
atgtttgatttccaggggctcatacctgggtatactccaacagctgtggacagccctctg
caaaaaaggagctttgcagagctctccatgattggtcaagccagtatcagcggcagtgaa
gacatcactgcttctcctcagttgtcaaaggaagatgcactcaatttatcggttccacgt
cagaggaggaggaggagacgaaaaattgaaatcgaggctgagagagctgccaaaagaaga
aatcttatggaaatggttgcccagttacgtgagtctcaggtggtctcagaaaatggacaa
gaaaaggttgtagatttatcaaaggcctcacgagaggcaacaagttctacctcaaatttt
tcatctgttacttcaaagtttatcttgcctaatgtctccacacccgtgtctgatgccttt
aaaactcaaatggagctgctgcaagcaggtctttcacgcacacccacaaggcatctgcta
aatggctctttaatagatggagaaccgcccatgaagaggaggagaggaaggaggaaaaat
gtagaagggcttgatctgttatttatgagcaacaaacggacatcattgactgtagaggat
gcagaagtgaccaaagcttttgaagaagatatggaggccctaccagcaaggaacattccg
tctcctggtcaactggatccagacactcgcatccctgtaatcaatctagaggatgggacc
aggctggtaggagaagatgctcccaaaaacaaggacttagttgaatggcttaaattgcat
cctacttacactgtagatatgccaagttatgtaccaaagagtgcagatgtgctgttttcc
tcatttcagaagccgaaacaaaaacgacacagatgtcgaaaccctaataaactggatata
aacaccttgacaggagaagaaagggtacctgttgtaaataagcgaaatgggaagaagatg
ggtggagctatggcccctccaatgaaggacttgccaagatggttagaagaaaatcctgaa
tttgctgttgctccagattggactgacattgttaaacagtctggttttgttccagagtct
atgtttgaccgtcttctcactggacctgttgtgagggaggaaggagcaagcagaagagga
agaaggccaaaaagtgaaattgccaaagcagctgcagcagctgctgctgtagcatcaact
tcgggaatcaacccactactaatgaacagtctgtttgctggaatggacctcaccagcctc
cagaatctacagaacctgcagtctctccagctcgcaggcctcatgggctttccgccaggg
ctagcaacagctgctgctgctgggggggatgctaaaaatccggctgccatgttgcctctg
atgttgccagggatggcaggattgcccaatatgtttggactaagtggattgttgaataac
ccaataacggctactactggaaatgccactactgcttccggtcaaggagagactgaggat
ggcgcttcaaaagctgaagagaagaaaaatgagaatgaagaggagaacaaagactctgag
aaaagcacagacactgtttctgctactgactctgcgaatggatctgtcagtgctgctact
gcggcgactaccgccactgccaccactaccaccaccaccaacactggattgcccacaaac
cctctggccttcaatcctttcctgctgtctaccatggctcctggcctgttctatccatct
atgtttctacctccgggactgggaggattgactctgcctggtttcccagcactagcagga
cttcagaatgcagtgggctccaacgaagagaaggctactgacaaaactgaaggaactgcc
tttaaagatgaagaaaacctggaaggcagtgatgcagaggagagccttgataaaactgca
gattcctccgttttagaagatgaaatagcacagggtgaagaattagactcacttgatggg
ggggaagaaatagaaaacaatgaaaatgatgaataa
DBGET
integrated database retrieval system
