Lagopus muta (rock ptarmigan): 125691206
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Entry
125691206 CDS
T09141
Symbol
WASHC5
Name
(RefSeq) WASH complex subunit 5
KO
K18464
WASH complex subunit strumpellin
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
125691206 (WASHC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lmut04131
]
125691206 (WASHC5)
Membrane trafficking [BR:
lmut04131
]
Protein recycling
Others
WASH complex
125691206 (WASHC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Strumpellin
HTH_43
DUF3106
SNaCT8
Motif
Other DBs
NCBI-GeneID:
125691206
NCBI-ProteinID:
XP_048796211
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All DBs
Position
3:11433031..11456751
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AA seq
1159 aa
AA seq
DB search
MVDFLAENNLCGQAILRIVSCGNAIIAELLRLSEFIPGVFRLKDKADQQKYGDIIFDFSY
FKGPEACEGKLEAKPELLDLDEEFRENNIEILTRFYLAFQSVHKYIVDLNRYLDDLNEGI
YIQQTLETVLLNEDGKQLLCEALYLYGVMLLVIDQKIEGEVRERMLVSYYRYSAARSSAD
SNLDDICKLLRSTGYSSQPGAKRPPNYPESYFSRVPISETFISMVVGRLRSDDIYNQVSA
YPLPEHRSTALATQAAMLYVILYFDASILHTQQAKMREIVDKYFPDNWVISIYMGITVNL
AEAWEPYKAAKTALNYTLDIANVKEQANRYAAVTERVHTQVQQFLKEGCLREELVLDNIP
KLLNCLRDCNVAIRWLMLHTADTACDPNNKRLRQIKDQILTDSKYNPKVLFQLLLDTAQF
EFILKEMFKQMLSEKQTKWENYKKEGSERMTELADVFSGVKPLTRVEKNENLQAWFREIS
KQIMSLNYDDSTAAGRKTVQLIQALEEVQEFHQLETNLQVCQFLADTRKFLHQMIRTINI
KEEVLITMQIVGDLSYAWQLIDSFTSIMQESIRVSPSMVTKLRATFLKLASALDLPLLRI
NQANSPDLLSVSQYYSGELVSYVRKVLQIIPESMFTSLLKIIKLQTHDIIEVPTRLDKDK
LRDYAQLGPRYEVAKLTHAISIFTEGILMMKTTLVGIIKVDPKQLLEDGIRKELVKRVAL
ALHRGLIFNPRAKPSELMPKLKEMAATMDGFHRSFEYIQDYVNIYGLKIWQEEVSRIINY
NVEQECNNFLRTKIQDWQSIYQSTHIPIPKFTPVDESVTFIGRLCREILRITDPKTTCYI
DQMNTWYDVKTHQEVTSSRLFSEIQDTLGTFGLNGLDRLLCFMIVKELQNFLSMFQKNVL
RDRTVQDTLKALMNAVSPLKGIIANSNKVYSAAIAKTQKIWTAYLDSIMKVGQMQILRRQ
ITNELNYSCRFDSKHLAAALENLNKAILADIEAHYQNPSLPYPKEDNTLLYEITAYLEAA
GIHNPLNKIYITTKRLPYFPTVNFLFLISQFPKLQYSKNLGVVCRRPADQIDWLPLVLGL
LTLLKQFHSRYTEQFLTLIGQFIRSTMEQCTSQKMPEMPADVVAALMFLEDYVRYTKLPR
KVVEAHVPSFIFDEFRTVL
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atggtggattttcttgctgaaaataacctctgtggtcaggcaattcttcggattgtctcc
tgtggaaatgctatcattgcagagctcttaagactttccgaatttatccctggggttttc
aggctgaaggacaaggctgatcaacagaagtatggagatatcatctttgatttcagttac
tttaaggggcctgaggcatgtgaaggcaaactggaagcaaaaccagagctactggattta
gatgaagaatttcgtgaaaacaacattgaaattttgacaagattttatctggcttttcag
agtgtacataaatacatcgtagatttaaacagatatttagatgacctcaatgaaggaatt
tacatccagcaaacattagaaactgtgctccttaatgaagatggaaaacaacttttatgt
gaagcactctatctgtatggagtcatgctgctggtcattgaccagaaaattgaaggagaa
gtcagagaaagaatgttggtttcctattacagatacagtgctgcccgatcctctgctgac
tccaatttagatgatatctgtaagttgcttcggagcactggatactcaagccaacctgga
gctaaaagacctccaaactaccctgagagttacttcagcagggtacccataagtgaaacg
ttcatcagcatggttgttggccgcttgcggtcagacgacatctataatcaggtttctgca
tatccattaccagaacaccgcagcactgctctggctactcaggctgctatgctctatgtg
atactgtattttgatgcttctattcttcacacacaacaagcaaaaatgagagagatagtg
gataaatacttccctgataattgggttattagcatttatatgggaatcactgtaaatcta
gcagaagcatgggagccatacaaagctgctaaaactgccctcaactacacactggatatt
gcaaatgtaaaagagcaggcaaacaggtatgctgcagtcactgagcgagtgcacactcag
gtgcagcagtttctcaaagagggctgtttgagggaagagctggtgctggacaatatcccc
aaactgctgaattgcctgcgagactgcaatgtagcaatccgttggttgatgcttcacact
gcagacacagcttgtgatccaaataacaaacgtctccgccagataaaggatcagattcta
acagactcaaagtacaatcccaaggtcctattccagcttcttctggatacagctcagttt
gaattcattctgaaagagatgttcaagcaaatgttgtcagaaaaacagacaaaatgggag
aattacaaaaaagagggatctgaaaggatgactgagcttgctgatgtcttttcaggagtc
aagcctctcacaagagtagagaaaaatgaaaatcttcaggcttggttcagagaaatctcc
aagcaaataatgtctcttaactatgatgattccactgcagcgggcaggaaaactgtgcag
ctaatacaggcactggaggaggtccaagagtttcaccagctggaaactaatctacaagtt
tgtcagtttctggctgacacccgcaaatttctacatcagatgatccgaactatcaacatt
aaggaagaggtcttgatcaccatgcagatagtgggcgatctttcttacgcttggcaactg
attgacagctttacatctataatgcaggaaagcataagagtcagtccatctatggtaact
aaactcagagctacttttctaaagcttgcctctgctcttgacctgccgcttctccgtatc
aatcaagcaaacagtcctgatcttctcagtgtatcacagtattactctggtgagctggtt
tcctatgtaagaaaggttctacagataattccagagagcatgtttacttcccttctcaaa
ataataaagcttcagacccacgacatcattgaagtgccaactcgccttgataaggacaag
ctacgagattatgctcagctggggccacgatacgaggttgccaagctgacccacgcaatt
tcaattttcactgaaggcatcctcatgatgaaaactacgttagttggaatcatcaaggtg
gacccaaaacagttactagaggatggaataaggaaggagctagtaaaacgggtggctctg
gctcttcacaggggactcatcttcaatcctagagccaagccaagtgaactgatgcctaaa
ctgaaagaaatggcagcaacaatggatggattccatcggtcgtttgaatacatccaggat
tatgtcaatatatatggcttaaaaatttggcaagaggaagtgtctcgtattattaactac
aatgtggaacaggagtgcaacaacttcctaagaacaaagattcaggactggcaaagcata
taccagtctactcatattcctataccaaagttcacacctgtagatgaatctgtaacattc
attggtcgtctttgtagagaaatcctgaggatcacagacccaaaaaccacgtgttatatt
gaccaaatgaacacctggtacgatgtcaaaactcatcaggaagtaaccagcagccgtctc
ttctcagagatacaggataccttggggacctttggtctcaacggtttagacaggctgctg
tgttttatgattgtgaaggagctgcagaatttcctcagtatgtttcagaaaaatgtatta
cgagacagaacagtccaggatacattaaaagcacttatgaatgctgtcagtcctctcaaa
ggaataatagcaaattcaaacaaggtttactctgcagcaattgcaaaaactcagaagatc
tggacagcatatttggactccataatgaaggttggtcagatgcagatcttaagacggcag
attaccaatgaattaaattactcctgcaggtttgactccaagcatttggctgctgcgttg
gaaaacctcaataaagccatactggccgatatagaagcgcactatcagaatccatcactg
ccttatcctaaagaagacaacactcttctgtatgaaatcacagcttatctggaagcagct
ggcattcacaatccattaaataagatctacatcacaacaaaacgtctgccatattttccc
actgtcaacttcctgtttctgatttcacagtttccaaaacttcagtacagcaaaaattta
ggagtggtgtgcaggcggccagctgatcagatcgactggcttcccttagttctggggctc
ctcaccttgttgaaacagttccactcgaggtacacagaacagtttctgactctgatcggt
cagttcattcgttcaacgatggaacagtgcaccagccagaagatgccagagatgcctgct
gatgtggtggctgccctcatgttcctggaggattacgttcgctacacaaaactaccgagg
aaggtcgttgaagcacacgtgcctagcttcatatttgatgaattcagaactgttctatga
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