KEGG   Lagopus muta (rock ptarmigan): 125691216
Entry
125691216         CDS       T09141                                 
Symbol
NSMCE2
Name
(RefSeq) E3 SUMO-protein ligase NSE2
  KO
K22756  E3 SUMO-protein ligase NSE2 [EC:2.3.2.-]
Organism
lmut  Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:lmut00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:lmut04121]
    125691216 (NSMCE2)
   03400 DNA repair and recombination proteins [BR:lmut03400]
    125691216 (NSMCE2)
Ubiquitin system [BR:lmut04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   125691216 (NSMCE2)
DNA repair and recombination proteins [BR:lmut03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    SMC5-SMC6 complex
     125691216 (NSMCE2)
SSDB
Motif
Pfam: zf-Nse zf-RING_UBOX U-box Rtf2 HalX zf-MIZ zf-C3HC4_2 zf-C3HC4 FAM60A Occludin_ELL CdiI_4
Other DBs
NCBI-GeneID: 125691216
NCBI-ProteinID: XP_048796235
LinkDB
Position
3:complement(11303945..11433006)
AA seq 239 aa
MQRGTRISFSSVNSSLSSLRNCQSYINTGMDIATHVALDLVENFNDEEDVRSMENVMLEY
AALDRELNHYMRAFEETVDQIKQDKPEKIPDLKSLVKEKFTALESMNSDSDLEKNEKYMY
FKDQLKDMKKQFRLQSDSNDNDDIEQIDEDIAVTQSQMNFICPITQAEMKKPVRNKVCGH
SYEEDAILKFIQTRKQQKKKVCCPKIGCSHDDVKGSDLVPDEALKRAIDSQNKQSWSAL
NT seq 720 nt   +upstreamnt  +downstreamnt
atgcagaggggtacaagaatctcattcagctctgtgaattcctctctctcatctctgaga
aactgtcagtcttacataaatactggaatggatattgctacccacgttgcccttgacctg
gtggaaaatttcaatgatgaagaggatgttagaagtatggaaaatgtcatgttagagtat
gctgcattggacagagagcttaatcattacatgagagcatttgaagaaacggtagatcag
ataaaacaagacaaaccagaaaagataccagatctgaaatcactagtaaaagaaaaattt
actgcattggagagcatgaacagtgactcggatttggaaaaaaatgaaaaatatatgtat
tttaaggatcaacttaaagacatgaaaaaacaatttcgtcttcaatcagatagcaacgat
aatgacgacatcgaacaaatcgatgaagatatagctgtgactcagagtcagatgaacttc
atttgtcccattacacaggcggaaatgaagaagccagttcgaaacaaagtctgtggacat
tcctatgaagaagatgccattctaaaattcatccagactcgaaagcagcagaagaagaaa
gtctgctgccctaaaattggctgtagccatgatgatgtaaaaggatcagatctcgtgcca
gatgaagcacttaaaagagcgattgacagtcagaataaacaaagctggtcagcgctgtag

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