Lagopus muta (rock ptarmigan): 125691289
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Entry
125691289 CDS
T09141
Symbol
IRX4
Name
(RefSeq) iroquois-class homeodomain protein IRX-4
KO
K24889
iroquois-class homeodomain protein IRX
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lmut03000
]
125691289 (IRX4)
Transcription factors [BR:
lmut03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
125691289 (IRX4)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
MCM_bind
Motif
Other DBs
NCBI-GeneID:
125691289
NCBI-ProteinID:
XP_048796434
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Position
3:62358434..62368188
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AA seq
490 aa
AA seq
DB search
MSYPQFGYPYSSAPQFLMSTNSLTPCCESGGRTLPESGPAAPAQTPVYCPVYESRLLATA
RHELNSAAALGVYGSPYGGPQGYGNYVTYGTEAPAFYSLNTLETKDGGGSAHAGISPAAA
YYPYEHSLSQYQYDRYGAMDGGTRRKNATRETTSTLKAWLQEHRKNPYPTKGEKIMLAII
TKMTLTQVSTWFANARRRLKKENKMTWPPRNKCSDEKRPYEEEEEEEEECSQEDAMKSEK
AEEPTGKEEKELELSDLEDLDAAESENSECEMRRPFPHPHPHPHPQPLPGGGPPPRAAEP
PAAAADEEEEESAERARGCLKPAADECEAALLGARPRGCEAKLCFPQGQPLLEAKPRIWS
LAHTATSLNQAEYPSCMLKRSGGSAAAAAVSAPVNVMDRHQDSPVTNLRNWVDGVFHDPL
FRHSTLNQALSNTTVSWATTKGAILETGALGRSVGNGANVLKGQLANLAHQDSSKEFLAF
PKAGSKMFCS
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgtcctacccgcagttcggctacccctactcctccgcgccccagttcctgatgagcacc
aactccctgacgccttgctgcgagtccggcggccgcacgctgcccgagtcgggcccggcc
gccccagcacagacgccggtctattgtcccgtgtacgagagtcgcctgctcgccactgcc
cgacacgagctcaactccgccgccgctctgggggtctacggcagcccctacggcggaccc
cagggctacgggaactacgtgacctacggcaccgaggcgcccgccttctattcgctgaac
actttggagacgaaggacggcggcggctctgcgcatgcgggcatctccccggcggctgct
tactacccctacgagcacagcctcagccagtaccagtacgacaggtacggggcgatggac
ggcggcacgaggcggaagaacgccaccagggagaccaccagcacgctgaaggcctggctg
caggagcaccgcaagaacccctaccccaccaagggcgagaagatcatgctggccatcatc
accaagatgaccctcacccaggtctccacctggttcgccaacgcccgccgccgcctcaag
aaggagaacaagatgacgtggccgcctcggaacaagtgctcggacgagaagcggccctac
gaagaagaggaggaggaggaggaggaatgctcgcaggaagacgccatgaaaagcgagaag
gccgaggagcccacgggcaaggaggagaaggagctggagctcagcgacctggaggatttg
gacgccgccgagtcggagaactccgagtgcgagatgaggcggcccttcccgcacccgcac
ccgcatcctcacccgcagccgctgccgggcggcggccccccgccccgcgccgccgagccc
cccgccgccgccgccgatgaggaggaggaggagtcggcggagcgggcccgcggctgtctg
aagccggcggcggacgagtgcgaggcggccctgctcggagctcggccgcgcggctgcgag
gccaagctgtgcttcccgcagggccagccgctgctggaggccaagccccgcatctggtcc
ctggcgcacaccgccacctccctcaaccaggccgaatacccctcctgcatgctgaagcgg
tcggggggatcggccgccgccgccgccgtctccgccccggtcaacgtcatggaccggcac
caggattcgccggtcaccaacctcaggaactgggtggacggggtgtttcacgacccgctc
ttcaggcacagtactttgaaccaagccttgagcaacaccacggtgtcctgggccaccacc
aaaggagccattctggaaacgggcgccttgggacgctcggtgggcaatggtgccaacgtg
ctcaaggggcagctggccaatctggcccaccaggactcgagcaaggagtttctcgccttt
cccaaagcagggagtaaaatgttttgctcctaa
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