Lagopus muta (rock ptarmigan): 125691297
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Entry
125691297 CDS
T09141
Symbol
NUP153
Name
(RefSeq) nuclear pore complex protein Nup153 isoform X1
KO
K14296
nuclear pore complex protein Nup153
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut03013
Nucleocytoplasmic transport
lmut03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
125691297 (NUP153)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
125691297 (NUP153)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lmut03019
]
125691297 (NUP153)
Messenger RNA biogenesis [BR:
lmut03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
125691297 (NUP153)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup153
Zn_ribbon_RanBP
Nup_retrotrp_bd
Motif
Other DBs
NCBI-GeneID:
125691297
NCBI-ProteinID:
XP_048796461
LinkDB
All DBs
Position
3:85013467..85060049
Genome browser
AA seq
1456 aa
AA seq
DB search
MASGGGGGAGGGAGGGGGKIRTRRYHLGAAKPPYGRSRQQGIISRMTESVKNIVPGWLQK
YFNKSEDECVDTNESTNQEENPVNYHHNYRDEDTIMTDGRVTPEPAGINLEEPSTSRSAL
NFSVVLTRPSLHRSHLNCTVLDSAVPPCQPSTSSTLGIGNPGLSLVKEIKDSTSQHDDDN
ISTTSGFSSRASDKDIAVSKTNSAPLLWSTEAERSHSLSQHSASSSKKPAFNLSAFGALS
PSLGNSSVFKTSQLGDSPFYPGKTTYGGAAAAARQTKVRIAPYQTPVRRQMKAKQANVQS
YGVTSSTARRILQSLEKMSSPLADAKRIPSSVTSPLSSPVDRSVLDITGFHSSRKQMESH
HPPVQKLVTPKAISLSGSRTQYFKPSLTPSADSSKIHQRVDTKHKEVKEKSLPEEQRVEP
SESNLTYPKFSTPASNGLTSGGSGGGKMRRERGVHYVSKSGQEQEVEEPVLPKISLPIST
ASLAPFNFSFLTSSTVSSSPSTVSTSVMNKVQPTSNVGSPVFRFSSPIVKSTEAEVLPPL
SMGFTFSVPVVKSAERSGCSDTAATPFLTRDTSAVNSISNKKEEKEEYDGPFKPAKVLKE
GSVLDILRNPGFTSVKTQSSASAQPITSTAVYTRPAISSFSAGKETSKQASSYWQTDPCD
PCLQNKATDSKCVTCQAAKVSTAESTKQTMSSSPSGSTKAAASPVGMLGFGDKFKAAPGT
WDCDTCLVQNKPEATKCIACETPKPGMGVMPTLALPVTTESSVTVTSSSSSTDTTVTLGF
GDKFKKPKGSWDCATCFVSNKAEDSKCVSCQSEKPGSSVPVTSSSASAFAAPSGELLDLD
KFKKPEGSWDCEVCLVQNKPEATKCVACESAKPGTKAEFKGFDASAVSTNAAVPSFTFGV
QSSSSDSQTSSTTGSFKFGEQGSFKFGIASESASSNAAPGGFKFPSSSGNFKFGVSSSDS
KSEENKKEDKSNNFTFGLPSTSSPAPLTFQFGTASLGQQEKKEQQPVLGGFSFGSSSTSS
ITTNENKTAVAGFTFGTVAENEVASASFAFKKPDERKDETPSTKGGFSFGNVESTPASQF
VLGRTEEKQDSVSSAAPLVFGKKADSEESKAQPVFSVGQSEHTKEESTAKPMFNFSFVKP
SEKETEQAKPAFSFGAQASTSDQGAAKPSFSFLSSSSSSTAVPTTSANSSSVFGSVTSSS
NPAPVPTPFVFGQASNTVSSTAFGNSAESTASQSFGFSQESKPATTSSTTGAAVAPFVFG
SGASSSSAASSGFTFGATATSSSTGSSSSFVFGSGSSAPAAGPAFGAGQLPAFGQSQGPG
QPNAPSFGSLSTTLFSAGPQPAPPAFGSVTSSTQPPVFGQQSSQQPGFGSGTSSAGPVFQ
FGSSTSNFNFTSNPEVFTFGANPPAPAAPVQPSGSSGFSFSQPPAFTVGTTGKNIFSASG
SSVSGRKIKTAVRRRK
NT seq
4371 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgggcggcggcggaggagcgggaggaggagccggcggcggcggcggcaagatc
cggacccggcggtaccacctgggagccgcgaagcctccgtacggcaggagcaggcagcag
ggaattattagcagaatgacagaatcagtgaaaaacatcgtaccaggatggctacagaag
tattttaataaaagtgaagatgaatgtgtagatacaaatgaatctacaaatcaggaagag
aatccagtaaattatcatcataattatagagatgaagataccataatgaccgatgggaga
gtcacacctgaaccagcaggaattaacctggaagaaccatccacgagtagatcagcactg
aacttttcggttgtgttaacaaggccgtctctgcatcggagccatttgaactgtaccgtg
ttagattctgctgtaccaccttgtcagccctctacatcttctacacttggcattggcaat
cctggactgtctcttgtaaaagaaataaaagattctacctctcagcacgatgatgataac
atctcaacaaccagtggcttctcctctagagcgtctgataaagatatcgcagtttcaaaa
accaattcagcaccactgctctggtccacagaagctgaaagatctcattccctctcccag
cattctgcatctagttcaaagaaacctgcattcaatttatctgcttttggagctctctct
ccttcgcttggaaactcttctgtctttaagacaagccagcttggagattctccattttac
cctggaaagaccacttatggtggagcagctgcagcagcaaggcagacaaaagtgcgaatt
gctccttatcagacaccagtaagaaggcagatgaaagctaaacaagcaaacgtgcaatcc
tatggtgtgacaagttccacagcacggcgcatcctgcagtctctggagaagatgtcaagt
cctctggcagacgctaaaagaattccatcttctgttaccagtccgctgtcttctcctgtg
gacagaagcgtgttggatattacgggcttccattcctctcgaaaacagatggaatctcac
catccgcctgttcaaaaactggtgacaccaaaggcaatctctctgtcaggaagtcggacc
cagtattttaaaccatctctgactccatctgctgattctagcaaaattcaccagagagta
gatacaaagcacaaagaagtgaaagagaagagtttgcctgaagaacagcgtgtggaacca
tctgaaagcaatttgacctaccccaaattcagtactcctgcatccaatggtctgacttca
ggaggaagtggtggtggcaagatgagaagggaaagaggggtacactacgtatcaaagtct
ggacaagaacaggaagtagaggaaccggtgctgccgaaaatatccctgcccatcagtact
gcatcactggctcctttcaacttcagttttctgactagcagtactgtctcgtcgtcacca
agcactgtttccacatcagtgatgaacaaggtacaaccaacaagtaatgttggcagtcct
gtgttcagattttcatctcctattgtgaaatctactgaggcagaagtgctacctccgttg
tctatggggtttacattcagtgttcctgttgtcaaatcggcagagcgctctggatgcagc
gatacagcagcgacgcccttccttacccgcgataccagcgctgtaaacagcatcagcaat
aaaaaggaagaaaaagaagagtatgatggtcccttcaaacctgcaaaggtcttaaaggaa
gggagtgtgttagacattctaagaaaccctggatttacatctgtaaaaacacaatcctct
gcatctgcacagcctatcacaagcacagcggtctatacaaggcctgcgataagtagtttt
tctgcaggtaaagagacctcgaaacaagcatcgtcgtattggcagactgatccgtgtgac
ccatgtttgcagaacaaagccacagacagcaagtgtgtcacttgccaagctgctaaagtg
tcaacagctgagagtacgaaacagacgatgagctcaagtccgagtggctccacaaaggca
gcagcctctccagtggggatgctgggctttggagacaaattcaaggcagcgcctggaacg
tgggattgtgatacttgtctggtccagaacaaacctgaagctaccaaatgcatagcatgt
gagacaccaaagcctgggatgggagtaatgcctactctggcattgccagtgaccacagag
agctcggtgactgtgacgtcctcctccagcagcactgacaccacagtcactctgggcttt
ggagacaagtttaagaagccaaaaggctcttgggactgtgcaacatgctttgtatcaaat
aaggcagaagatagcaaatgtgtatcctgtcagtccgagaaaccagggagttcagtgcct
gtgaccagcagcagtgcgtctgcatttgctgctccttctggagaacttctggatttagac
aaattcaagaagcctgaaggaagctgggattgtgaggtctgcttggtccaaaacaaaccg
gaggccacaaagtgtgtagcctgtgaaagtgcaaagccaggcaccaaagcagagttcaaa
ggttttgatgcttctgctgtgtccacaaatgctgcagtgccatcatttacatttggtgtt
cagtcatcatcctctgattctcaaacatcgagtaccacaggaagttttaaattcggagaa
caagggagcttcaagtttggcattgcatctgaatctgcatcttctaacgctgcgcctggg
ggattcaagtttcccagcagttctgggaacttcaaatttggagtttcatcctcggactct
aaatcagaagagaataaaaaggaagataaaagtaacaattttacctttggccttccgtct
acaagtagtccagctcctttaacgtttcagtttgggacagcaagcctgggacagcaggaa
aagaaagagcaacaaccagtattgggaggtttcagttttggttcaagttctacttcttcc
ataactaccaatgagaataaaaccgcagtcgctggcttcacttttggaaccgtggcagaa
aatgaagttgcgtcagcttcttttgcatttaagaaaccagatgagagaaaggacgaaact
ccttcaaccaagggaggcttctcttttggtaacgtggagtcgacacctgcctcgcagttt
gttttgggaaggacagaagagaaacaggattctgtcagttctgctgctccgttagtgttt
gggaagaaagctgacagtgaagagtcaaaggcacaacctgtcttttccgtcgggcagtct
gagcataccaaagaagaaagcacagcaaaacctatgttcaacttcagctttgttaaacca
tcagagaaggaaaccgagcaggcaaagccagctttttcatttggggcccaagccagtact
tcagatcaaggagcagcaaagccatccttcagcttcttgagctccagttcctccagcaca
gctgtgcccaccacttcagccaacagcagcagcgtgtttggcagcgtcacctcttcctcc
aaccctgcgccggttcccactcccttcgtgtttgggcaagccagcaacactgtgagcagc
actgcttttggcaattctgcagaatctacagcatctcagtcatttggcttctctcaagaa
agcaaaccagcaaccacatcttccaccactggtgcagcagttgctccgtttgtcttcggt
tcaggagccagcagtagcagtgcagcaagttctggctttacctttggagccacggccaca
tcaagttcaacagggtcgtcctcttcatttgtctttgggtctgggtcttcagcgcctgct
gctggcccggcctttggtgccggtcagctaccagcatttggccagagccagggccccggc
cagccgaatgctcccagctttggatccctgtcaacaacgctgttttcagctggccctcag
cctgcgcctcctgccttcggctctgtgacgagcagcactcagccccctgtgtttggacag
cagtcgagccaacaaccgggttttggctccggcacctccagtgctggtcctgtattccag
tttggaagtagtacttctaatttcaactttacaagtaacccagaagtatttacttttggt
gcaaatccccctgcaccagcagcaccggtacagccttctggctcttcaggattttcattc
agccagcctccagcatttacagtggggactactggaaaaaatattttctctgcctctgga
tcttcagtttccggtcggaagataaagactgcagttagacgtagaaagtaa
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