Lagopus muta (rock ptarmigan): 125691345
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Entry
125691345 CDS
T09141
Symbol
NHLRC1
Name
(RefSeq) E3 ubiquitin-protein ligase NHLRC1
KO
K10602
E3 ubiquitin-protein ligase NHLRC1 [EC:
2.3.2.27
]
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
125691345 (NHLRC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lmut04121
]
125691345 (NHLRC1)
Enzymes [BR:
lmut01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125691345 (NHLRC1)
Ubiquitin system [BR:
lmut04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
125691345 (NHLRC1)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
zf-RING_UBOX
zf-RING_5
zf-RING_2
zf-C3HC4_3
zf-C3HC4
zf-C3HC4_4
zf-C3HC4_2
zf-RING_11
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
125691345
NCBI-ProteinID:
XP_048796568
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All DBs
Position
3:complement(86738781..86742139)
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AA seq
458 aa
AA seq
DB search
MRLPRTARAIACNCARFSARYRARIAAAALRRLARSCRARSVGARRRRKEGKLRAPCRSR
PAGGSRRPAEARRVAAGMAEEADEAELGLLECRVCFERYGPGGGRRPRNLPCGHVLCRGC
VEALGGPERRRLECPFCRRPCGLSETGDCLPLLQLLELLGPGGRGPSVLGGAGGGAAPPR
LRLSLGGWGSLLNPTGVAACRTSGRLAVTHDGKKRIHVFGPSGSCLQRFGERGDAGNDVK
YPLGVAVTADGHVVVADGGDRSVKAFDFDGRGVLAVREGFCLPWGLGATPGCDVMVTDAE
AGALFRLTADFGAGRLKKCQLVRSKLTSPRGVAVCPSSGAVVVIEHLKTEGPSGCSTRMK
IFSADMTLVGQMDSFGLNLIFPSKIYTTAVAFDKEGCIVVTDVCSQAVISLGKPEEFPIF
NPLVSHGLSYPVGLTYTADNSLVVLDSGDHSVKIYSSA
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgaggcttcccagaacagcaagagcaatcgcgtgcaattgcgcccgtttctctgcccga
tacagggcacgaatagcagcagcagcgctgcgccggcttgcgcggagctgccgagcgcgg
tctgtgggcgcccggcggcggcggaaggaggggaagctccgcgctccgtgccgcagccgg
cccgcagggggcagccgccggcccgctgaggcccgccgggtcgcggcggggatggcggag
gaggcggacgaggcggagctgggcctgctggagtgccgggtgtgcttcgagcggtacggc
cccggcggggggcggcggccgcgtaacctgccgtgcggacacgtcctgtgccgcggctgc
gtggaggcgctgggcggccccgagcggcgacgcctggagtgccccttctgccggcggccc
tgcggcctcagcgagaccggcgactgcctgccgctgctgcagctgctggagctgctgggc
cccggcggccgcggcccctcggtcctcggcggggcgggcggcggcgcggctcctccgcgg
ctgcggctgtcgctgggcggctgggggtcgctgctgaaccccacgggggtggcggcgtgc
cggacgtcggggcgcctggcggtgacccacgacggcaaaaagaggatccacgtcttcggg
ccgagcgggtcctgcctgcagcggttcggggagcggggggacgcgggcaacgacgtcaag
tacccgctgggcgtggcggtcacggccgacgggcacgtggtggtcgccgacggcggggac
cgctcggtgaaggccttcgactttgacggaaggggggttctggccgtgcgagaagggttc
tgcctgccgtgggggctgggcgccacccccgggtgcgacgtgatggtgacggacgccgag
gccggagctctgttccgcctcacggctgacttcggcgcggggcggctgaagaagtgccag
ctggtgcgctccaagctgaccagccccagaggggtggccgtgtgcccgagctcgggtgcc
gtggtggtgatagagcacctgaagactgaaggaccgagtggctgcagcacccgaatgaag
atcttcagtgcagacatgactctcgttggccagatggatagctttgggctgaacctcatc
ttcccctccaaaatatataccacagctgtggcctttgacaaagagggctgcatcgtcgtg
accgatgtctgcagtcaggctgtgataagcctggggaaacccgaggagtttcccatcttt
aaccctctagtaagccacgggctttcttatcccgtaggactaacttacacggcagacaac
tccctcgttgttttagacagcggtgatcattcagtgaaaatatatagctctgcttga
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