Lagopus muta (rock ptarmigan): 125691370
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Entry
125691370 CDS
T09141
Symbol
KDM1B
Name
(RefSeq) lysine-specific histone demethylase 1B isoform X1
KO
K19413
lysine-specific histone demethylase 1B [EC:1.-.-.-]
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lmut03036
]
125691370 (KDM1B)
Chromosome and associated proteins [BR:
lmut03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
125691370 (KDM1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Amino_oxidase
NAD_binding_8
zf-CW
SWIRM
Thi4
DAO
Pyr_redox_2
Pyr_redox
HI0933_like
Pyr_redox_3
FAD_binding_2
FAD_binding_3
2-Hacid_dh_C
FAD_oxidored
Lycopene_cycl
GIDA
NAD_binding_9
AlaDh_PNT_C
ThiF
KARI_N
Attractin
NAD_binding_7
Shikimate_DH
zf-RING_2
YjeF_N
Motif
Other DBs
NCBI-GeneID:
125691370
NCBI-ProteinID:
XP_048796633
LinkDB
All DBs
Position
3:86752276..86781333
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AA seq
820 aa
AA seq
DB search
MSAGRVRTKKKACSSEQSPDSLPLRSSGRQVKKKAAEATDDDDDASEKKYRKCEKAGCTA
TCPVCFASAAERCAKNGYTSRWYHLSCGEHFCNECFDHYYRSHKDGYEKYTAWKRIWTSN
GKSEPSPKAFMADQQLPYWVQCTKPECGKWRQLTKEIQLTPQIAKTYRCGMKLNNSTKTE
GSDQCSMPEDLRVAEVSDHWWYSMLILPPLLKDSVAAPFLAAYYPDCVGMSPSCTSTNRL
PGESNLVKLEHLKSVPNLTVPGMNKYFQPFYQPNECGKALCVRPDVMELDELYEFPEYSR
DPTMYLALRNLILALWYTNCKEALTPQKCVHHIIVRGLVRIRCVQEMARILHFMTRKGLI
NTGILSVSTDQYLLPKEYHNKSVIIVGAGAAGLAAARQLHNFGIKVIVLEAKDRIGGRVW
DDKTFPGVTVGRGAQIVNGCVNNPMALMCEQLGIKMHKLGEKCDLIQEGGRITDPTIDKR
MDFHFNAILDVVSEWRKDKTQHQDVPLGEKIQEIYKAFIRESGIQFSELEEKVLQFHLSN
LEYACGSNLSQVSARSWDHNEFFAQFAGDHTLLTVGYSTIIDKLAEGLDIRLNFPVQSID
YSGEEVQVTTADGTVWRTQKVLVTVPLALLQKNAIQFNPPLSEKKIKAINSLGAGVIEKI
ALQFPYRFWDSKIQGADFFGHVPPNSSQRGLFSVFYDMDPEGKQSILMSVVTGDAVTTIK
NLDDKQVLQQCMTVLRELFKEQEVPDPVKFFVTRWSKDPWLQMAYSFVRTGGSGEAYDII
AEDIQGTIFFAGEATNRHFPQTVTGAYLSGVREASKIAAF
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atgtcagctggaagggtacgaacaaagaaaaaggcatgttcttcagagcagtctccagac
agccttcctctgaggagttctggaagacaggtgaagaagaaagcagctgaggcaacagat
gatgatgatgatgcatcagaaaagaaatacaggaaatgtgagaaagctggatgcactgca
acgtgtcccgtttgctttgccagcgcagccgaaagatgtgcaaaaaatgggtatacgtcc
agatggtatcacctttcctgtggggagcacttctgcaatgaatgttttgaccactactac
cgaagtcataaagatggttatgagaaatacacagcctggaaaaggatttggacaagtaat
gggaaaagtgagcccagcccaaaagccttcatggctgatcagcagctcccttattgggtg
cagtgtacaaagccagagtgtggtaaatggcgtcagctgacaaaggaaatccagctgaca
ccgcaaatagcaaaaacctacagatgtggtatgaaactaaacaattccaccaagacggag
ggctcagaccaatgttccatgcctgaggacttgagagtggctgaagtttcagaccattgg
tggtactccatgctcatactccctcctttgctgaaagacagtgtggcagctccctttcta
gctgcatattatccagactgcgtgggcatgagtccatcctgtaccagcactaatcgttta
cctggtgaatccaaccttgtgaagttagagcacttaaagagcgtgcctaatttgactgtt
ccaggaatgaacaaatatttccagcctttttaccagcccaatgaatgtgggaaagcactt
tgtgtaaggccagatgtcatggaactagatgagctctatgagttcccagaatattcacga
gatcctaccatgtatttggccttgagaaacctgattttggctctgtggtacacaaactgc
aaggaggcccttacccctcaaaaatgtgtccatcatataattgttcgaggacttgtgcgt
attcgctgtgtacaggaaatggcgaggatactgcattttatgacaaggaaagggctaatt
aatacagggattttatcagtcagtactgaccagtatcttcttcctaaagagtaccacaat
aaatctgtcattattgttggggctggtgcagcaggattagcagcagcccgacagctacac
aactttgggattaaggtcatcgtcttagaagctaaggacagaattggtggccgagtgtgg
gacgataagacattcccaggcgtcactgttgggagaggtgcacaaatcgtcaacggatgc
gtcaacaacccaatggcactaatgtgtgagcaacttggcattaaaatgcacaaactgggg
gagaaatgtgacttgatccaggaaggtggaaggataacagatcccactattgataaacgt
atggactttcatttcaatgccatcctagatgttgtctctgagtggagaaaagataaaacc
cagcatcaggatgttcctcttggtgagaaaatacaggagatctataaagcctttattcgg
gagtctggtatccagttcagtgaactggaagaaaaagtactacagttccatctcagtaat
ttggagtatgcctgtggcagcaatctctctcaggtatctgcacgctcatgggaccataat
gagttttttgctcagtttgctggagatcacactcttctaactgtgggatattccactatc
attgataagttggctgaagggctggacatccggttaaatttcccagtacagagtattgac
tattctggtgaagaagtacaggtcactactgcagatggaactgtgtggagaacacaaaag
gtattagtgacggttccactggcccttctccagaaaaatgccattcagttcaatcctccg
ctgtcagaaaaaaaaattaaagctattaatagtttgggagcaggagtcattgagaagatt
gcactgcagtttccttacagattttgggatagtaaaattcaaggtgctgatttttttggt
catgttccacccaattccagccaacgtggactgttcagtgttttctatgacatggatcca
gagggcaaacaaagcattttaatgtcagtggtcactggagatgctgtgacaaccattaag
aatttagatgacaaacaagtactgcaacagtgtatgactgtacttcgagagctgtttaag
gagcaggaggttcctgacccagtgaagttttttgttactcgatggagcaaagacccttgg
ctccagatggcatacagttttgtaagaacaggaggcagcggcgaagcttatgacattata
gctgaagacatccaaggaacaattttttttgctggtgaggccacaaacaggcactttcct
cagactgttacaggagcttacctgagcggggttcgagaagccagcaaaatagcagcattt
taa
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