Lagopus muta (rock ptarmigan): 125691397
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Entry
125691397 CDS
T09141
Symbol
TRIP13
Name
(RefSeq) pachytene checkpoint protein 2 homolog
KO
K22399
pachytene checkpoint protein 2
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
125691397 (TRIP13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lmut03036
]
125691397 (TRIP13)
Chromosome and associated proteins [BR:
lmut03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Others
125691397 (TRIP13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_lid_TRIP13_C
TRIP13_N
AAA
AAA_22
nSTAND3
AAA_16
AAA_14
Viral_helicase1
AAA_18
KAP_NTPase
AAA_5
AAA_28
AAA_24
NPHP3_N
IstB_IS21
RuvB_N
Cytidylate_kin
ATPase_2
AAA_30
TsaE
AAA_33
RNA_helicase
NACHT
AAA_25
ABC_tran
AAA_11
bpMoxR
DUF815
AAA_7
AAA_17
TIP49
ATPase
SLFN-g3_helicase
PduV-EutP
Rad17
AAA_19
Mg_chelatase
AAA_3
PhoH
SPC25
NTPase_1
Motif
Other DBs
NCBI-GeneID:
125691397
NCBI-ProteinID:
XP_048796687
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Position
3:91289696..91309638
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AA seq
432 aa
AA seq
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MDEAAGDLKQALPSACDTLQIHVEVHQKSNSTAKKEDIRMSVLKLLNRHNIVFGDYKWTE
FDDGFLNSHVQSVSIVDTELKLKERQPIDLSKSSLSIHIFHLNEEGPSIENLEEENEDIV
AANHWVLPAAEFHGLWESLIYDTEVKSHLLDYVTTTLLFSDRNVDSNLISWNRVVLLHGP
PGTGKTSLCKALAQKLTIRLSYRYRYGQLIEINSHSLFSKWFSESGKLVTKMFQKIQELI
DDKDALVFVLIDEVESLTAARSAFKAGTEPSDAIRVVNAVLMQIDQIKRYPNVVILTTSN
ITEKIDMAFVDRADIKQYIGPPSAAAIFRIYLSCLEELMKCQIIYPRQHLLSLRELEMIG
FVENNVSRLSLVLKEISRKSEGLSGRVLRKLPFLAHALYIQSPSVTMTTFLQALSLVVDK
QFEERKKLADCV
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagcggctggggatttgaagcaagccctcccaagcgcgtgcgatacccttcag
atacacgtggaagttcatcagaaatcaaacagtacggcaaagaaagaagatatcaggatg
agtgtcctaaaactgttgaacagacataacattgtgtttggtgattacaagtggacggaa
tttgatgatggcttccttaacagccatgtgcaatctgtgtcaattgtggatacagagctg
aagttgaaagaaagacagcctattgatttgagcaaaagcagtctttccattcatatattt
catctgaacgaagaagggccaagcattgaaaacttggaagaagaaaatgaggatattgtt
gcagctaaccactgggtgctacctgcagctgaattccatggcctttgggaaagtcttata
tatgacactgaagtaaaatcacatttacttgattatgtcacgacaacattactattttct
gacagaaacgtcgacagcaacctgatatcatggaacagagttgttttgctgcatggccct
cctggaactggcaaaacctctctctgcaaagcattggctcagaagctgacgatacgacta
tcgtacaggtacagatatggacagttaattgaaataaacagccatagtcttttctctaaa
tggttttctgagagtggcaagcttgtaaccaagatgttccagaagattcaagagttaatt
gatgacaaagatgctcttgtgtttgtactgatcgatgaggtggagagcctcacagcagca
cgcagtgccttcaaggcaggcacagagccttcagatgctattcgtgtagtgaatgctgtt
ctgatgcaaatagatcagatcaaaaggtatcccaatgtggttatcctgactacttcaaat
attacagagaaaattgacatggcatttgtagacagagcagacataaagcaatacattggc
cctccatctgctgcagcaatattcaggatatacctttcttgcctggaagagctgatgaag
tgccaaataatatatcctcgacagcatctcttgtcactcagagagttagaaatgattgga
tttgtagaaaacaatgtgtccaggttaagtctggtactaaaggaaatctcaagaaaaagt
gaaggtcttagtggccgggtcctcagaaaactccctttcctagcacatgcactttatatc
caatcccccagtgttacaatgacaacgtttcttcaggctctttcacttgtagtagacaaa
caatttgaagaaagaaaaaaacttgcagactgtgtgtga
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