Lagopus muta (rock ptarmigan): 125691436
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Entry
125691436 CDS
T09141
Symbol
SNTB1
Name
(RefSeq) beta-1-syntrophin
KO
K24064
beta-syntrophin
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
125691436 (SNTB1)
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Gene cluster
GFIT
Motif
Pfam:
Syntrophin_4th
PH_17
PDZ
PH
PDZ_2
PDZ_6
Motif
Other DBs
NCBI-GeneID:
125691436
NCBI-ProteinID:
XP_048796788
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Position
3:13069141..13175379
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AA seq
522 aa
AA seq
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MAVAAAGGGGGGRAQRSGWLEVLVRERWHKVLANLGGEALVLSGEERPDGAAHNGLGGDG
AACRGAEGGGGGSAVRTAFTDPPEQVPEAVSNKKRCVKVLKQELGGLGISIKGGKENKMP
ILISKIFKGLAADQTQALYVGDAILAVNGTDLRDATHDEAVQALKRAGKEVLLEVKYMRE
ATPYVKKGSPVSEIGWETPPPESPRLGCVSADPLSQLSLSIHRDKKTIPLKMCFVTRNVT
VSDPENRLIEVHSPDAKHTVVLRSKDSATAQAWFNAIHSSVNDLIPRVIAEVRDQLGKAG
IAGSREIRHLGWLAEKVPGDNEKHWKPVLVVLTEKDLLIYESMPRMKEAWFSPLHTYPLL
ATRLVHSGPGKGSPQSGVDLSFATRTGTRQGIETHLFRTETSRDLSLWTRSIVQGCHNSA
ELITEITTSCTYKSQECRLTIHYEHGFSLTTEPQDGAFSKTIAQYPYEKLKMSSDDGIRM
LYLDFGGKDGEIQLDLHSCPKPIVFIIHSFLSAKITRLGLVA
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atggcggtagcggcggcgggcggcggcgggggcggccgggcgcagcgcagcggctggctg
gaagttttggtgcgggagcgctggcacaaagtgctggccaacttgggcggcgaggcgctg
gtgctgagcggagaggagcgccccgacggcgcggcccacaacgggctgggaggcgatggg
gcggcgtgccgcggggccgagggcggcggcgggggctcggcggtgcgcaccgccttcacc
gacccccccgagcaggtgcccgaggccgtctccaacaagaagcgctgcgtgaaggtgctg
aagcaggagctgggcgggctgggcatcagcattaagggaggcaaggagaacaagatgccc
atcctcatcagcaagatcttcaaggggctggcggccgaccagacccaggccctctacgtg
ggcgatgccatcctggccgtcaacggcaccgacctgcgggatgccacccacgacgaggcg
gtgcaggcgctcaagcgggccggcaaggaggtgctgctggaagtgaagtacatgagagaa
gcaacaccctatgtgaagaagggctctccagtttcagagattggatgggagacacctcct
ccagaatctccccgcctgggatgtgtgtctgctgacccactgtcacagctttcactctcc
atccacagggacaaaaagacaataccgctcaagatgtgctttgtgacacgcaacgtgacg
gtgtcagaccctgagaacagacttattgaagttcattcacctgatgccaagcacaccgtg
gttctcaggagtaaggactcagctactgcccaggcctggttcaatgccatccactccagt
gtcaatgatctcatccccagggtgattgcagaggtcagagaccagctgggtaaagcaggg
attgctggaagtcgagagattagacatctaggctggcttgcagaaaaggtgccaggagac
aacgagaagcactggaagccagtgttagtggtcttgacagagaaggacctcttaatatac
gagagcatgccacgcatgaaagaggcttggttcagccctctgcacacctaccccctccta
gccaccaggttggtgcattctggtccaggaaaaggctcaccgcagtctggggtggatttg
tcctttgcaacccgtaccggtacgaggcaagggatcgaaacacatctgttcaggacggag
acaagcagagacctctcactgtggacaaggagcatcgtgcagggctgtcacaattctgca
gagctcatcacagaaatcacaacatcttgcacatacaaaagccaggagtgccgtttgacc
atccattacgaacatggattctctcttacaactgaaccacaagacggtgccttctctaag
acaattgcacagtacccctatgaaaaactgaaaatgtcctcagatgatgggataaggatg
ctttatttagacttcggaggaaaagatggagaaattcaactggaccttcattcctgtcca
aaaccaattgtattcatcattcattccttcctgtcggctaagattacaagacttggtttg
gtggcataa
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