Lagopus muta (rock ptarmigan): 125691468
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Entry
125691468 CDS
T09141
Symbol
CFAP54
Name
(RefSeq) cilia- and flagella-associated protein 54 isoform X1
KO
K25553
cilia- and flagella-associated protein 54
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
lmut03037
]
125691468 (CFAP54)
Cilium and associated proteins [BR:
lmut03037
]
Motile cilia and associated proteins
Sperm associated proteins
125691468 (CFAP54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CFAP54_N
fn3
Motif
Other DBs
NCBI-GeneID:
125691468
NCBI-ProteinID:
XP_048796842
LinkDB
All DBs
Position
1:45221276..45327931
Genome browser
AA seq
3174 aa
AA seq
DB search
MAEPTEPPPPAPQPRPLPAAFFGAVAPGNPVVDSLDAELRDVLGFLRRLRGTGEAEPQRH
ELHRRGANTLFKIWTKYKPRLPDWYYNDKLLKVGDSLAQIKEYKLALTQCYGRYLQQFCS
VNPDDITDDENQFKSTFFPNGFKDKNASLTFHALQERNVCVYQMVCSSDRNLQKQESLQT
CLKVLSSLRLTMQVALPQQNLCWLIYNGTIHIYTICRHLMMIGQSAQVLEYLLWASICME
LSIPLLSVHYLTWRATLYAAVCQCYFDCQAGIHGEVFARRGLIQIDELKQLENISSSQKS
SETGKIFREATIKMSVMIFKRAVYESRRKPKSYFRPKLRASLKEAQKLPWPRTTTEQLLM
EMFDGTAAQFLAILEALSDSSRRVLHPTPPVPDEPEIHDVISELFFAGLEILSGGVSSTD
IQGDDCADKFGMINASSTLLQLILTGEKRVSGEAAVKFVKLAFNYEEWDVFDSAIVFVTN
FLQAQNDPKWKKAEMELQLLTLMRPLLFPGKFRHGFSVDESNTRRDHLPCVSDKKSTVRT
GSLKHGEPSHDLIILATTVFSCVSTSKQNILPDKEILFDVLVFLWQKCKTGLQLNPMNGS
GYFKYNHKYKASKWVYVLWIINEVILQSNVADTDVVMAAEITLCLTAVLESMADSASKSK
KKAGKRSVILSVDETCDIPEILMRSPTEQLQLAYENLEKTINEMNKSRLMTFVPDGKSVF
DNCCTKVGSHGQNLSSVLEWSNDKTRTGNIFLMDLHLELIQAQHRIAVKLLKLTQGVQKD
GRNLKSGEHHVKKIEDSHYLTEADIMGKIKKNKLSRAIFLMEKAVQMFPKDLSTYSQRQL
LQEALTLIEQVEAEQTALYHSLKEFMSSKKKNKIPPPPLLLSRSHCSMTFKPASFSSDVQ
VAWYSILGCVAGENNSKVRLNNNKLPNAGEEILADGKSLLEIQGLDPNEKYIFAVAAYSS
DGKLIGDAIGETTRPILAYPPLSATTVRAYLTQVAYQTGNYTLARGAFSPMWDYFVSNSS
PLPTNAAVISARSTLTISEKRLRFEAVSQTSPIALYLFLRNIFAVCDINVMEGALFCDSI
YCNEILYKEQVARLAECERMTVAIELSNFLNDASYALQSVVQCYGLLAPIIYHKISAVPV
VQILIKCLAVLQEIPSATLQRRQAGCYESIQHMIACTSFYTAKVLRSLKEYELAVIIINY
GKKLLDSSQRTSPGQSGATESEETHKIKKASARTSHLAAMEKATENLSALESYLLRLTQP
ARGSELAGQEDPLFLYPIISCWTSNTAYREVMKFRKKSRFLEFFIQVLHKILNEEKFHSV
LEWAENVQTYLKRRNNHILCINETPRCKTSSPGEPEGTKKYAVGIKEKSMETSPLKKKEA
SALKKQRKETPSATRKRQTLRQYFAKHPNIMKSPEAQRNLTEELQKVARNTLVVLLKPIV
SSYLNQKKFHQICLEEMPWRSQMNIYLATAHYNLFKKKLEEQYNIGIYGSRRQDSYSILD
PEIFSLNNSGTVVVREALESNRRASNPLPLEKSPSELTKKQTYGSSEHNTKLWGRDTPQT
QMTNDMQISISLSPKERKQFPSDTILLDHFTKIFLHLRRAAVLAHRGGHWTLLQNACREL
WNYTQESQSIANHSHSHKDAFPITREFLRNTVWLPFYLASDMIIDMITELQASNSLKIVE
PEGDFCIPSCLGGITDENGGSNLHPQSPLDDVNVVDLKWICNLILKTLEFLYQMKKWEAL
IHIAVQFNVFTHERYTEQVSPLLVYAQRQLLERIQQFSGPDSHESHFTKYLSDNANKMSC
RDYIGKNLQLPFAHSASVLIFPDCFLYPELKNDYADGTQIKPIVHVPLDVKDTLKCFRET
LKKSKYHSRTLRHSRKLLSLFLAYTQENVGRTISQISPNRRLEFNVGAELAFLPTPSDPS
QEKFNFSSSIESKPIPHSQLSLIVSSYEQTIEILEINNQRDLKVQALHELGNLHFFAGNK
RAAFKHWCQALDETLNIADILNTWQELGFPKNAMECFEVGRSTDISQKFLSQAGIWGCLH
AAVLVAKIAQYITTSNVRLRTKYCLFSAILFKTLFRASLPHPTSDCDFAQYETHVLIPGI
DLFSDRYRADISTVVASLNFLMSELHCAKQNLTILPLFTLYQYFVSEICKDPAKCIEGRI
FKIKVLTDIGFFTEAFHELYLLNCGERIPWKIPAGYKKTEETKSLLYFDSSKSLLSFTNL
QVLEDIFNWSLSLTVVPLCDQQIMNKLILAKMHFIICLSDTINNTPEKVEKCIYSVDNKM
DGVTPSNEKVDAVKNSRQREQRDTVMQLINCKAELNMTMLKGILLTEAEESLNHLVQNIQ
DKYDGKISLCSAEDLEVLIEAKLQLAAISQQWHRAAFSVALAFSAIRLLQDADIFRMTAT
SFQEKKDKRESLDSCVEDAQQLHSSIAEDHLNIHLWLRCRKMLVTALATQLPGVGDKEEN
YVAERKSIIKEVILEAEAFGDIETQAEMMVQAAILDLQEGCPTADIELLLQNIISLLQED
KFISPPASLTLVKSMLLMTDVLALQTVENMENCSSAVEPLNLLNLAHEITLKEIFFCGEY
IEQQIEDSTMTCLVLPAKNIYLPYINLLAQVKMRIGNTLAERVACTPEREDPLQWLCALK
HLETALKLCRASATKALDMEAQLLFQIGKVECQITKAGSNKSYRAVETLLEAIKLSQEHD
QNFELIRRSYLEIALLYLHFATNNENLSQRDKMVASKSEISAGELSSSPGEALKSEGCKV
RGWIAVRAARQVSEAVVASQLLTGMESIKENNVKDTVQQKIPEFASMDLLASYRDYLSDG
YNVVCGSHTASSTEDKQIIKEQNQNEGMECLDTSSSQKKEIITWVHLIRYHSYIKGLCHA
NLFAAHKSGLGSLSERDGRLNSLFDSRIVLRVAEMHSFLKKHLFEYSVCCLESFPEQLQD
LEVSHGSPPDSSKASLENSGILCVEIASPVSAITEADGQTESRATNASNKEIIIQWYIPP
LAKPTNDTETKILLLYAYNTEPVKISNVKFFSSVSVFSGQLWIPLARIISLREKLSNLKH
QVEMLMQSLGNSSAAEPTGFLEQNETLKTSPSEKTEMNIARVHLDEKTEEMAIRCLSEVK
ALLSAVPVMTLPLTEIPFDITLQSIASLEDMFDLANGCTITEESLFSWIISLFH
NT seq
9525 nt
NT seq
+upstream
nt +downstream
nt
atggcggagcccacagagccgccgcccccagctccgcagccgcggccgctgccggctgct
ttcttcggggccgtggcgccgggcaacccggttgtggacagcctggatgccgaactgcgg
gacgtcctgggctttctgcggcggctgagaggcacaggggaggccgagccgcagcggcac
gagctgcaccgccgcggagcaaatactctgtttaagatttggaccaaatacaagcctcga
ctgccagactggtattacaatgacaaacttctgaaagttggtgattcccttgctcagatc
aaagagtataagttggcacttacacagtgctatggaagataccttcagcagttctgttct
gtaaatcctgatgatatcacagatgatgaaaatcaatttaaatccaccttttttccaaat
ggtttcaaggacaaaaatgcatctcttacgttccatgctttgcaagagaggaatgtttgc
gtttatcagatggtttgtagcagtgacagaaaccttcagaaacaagagtccctgcagacc
tgtttgaaagtcttgtcatcattacgactcaccatgcaagtggctctacctcagcagaat
ttgtgttggcttatctacaatggtacaattcatatttataccatatgcagacatttgatg
atgataggtcagtctgctcaggtgctggaatatctactgtgggccagtatatgtatggaa
ttatccattccactcttatctgtacattatttgacatggagagccacgctatacgcggca
gtttgtcagtgttattttgactgtcaagccggcattcatggagaggtatttgctcgccgt
ggtctgattcaaattgatgaactgaagcaattagaaaatatcagttcttcacagaaaagt
tcagaaacaggaaagatttttagagaggcgactataaagatgtcagtaatgattttcaaa
agagcagtatatgaatccagacgaaagccaaaaagctattttcgacctaagttaagagct
agcttaaaagaagcacaaaaattgccatggcctcgcacaactactgaacagctgctgatg
gaaatgtttgatggtactgcagctcaattccttgccatcctggaagctctgtctgatagc
agtaggcgtgtgctgcaccctactccacctgttcctgatgaacctgaaattcatgatgtg
atttcagagcttttttttgcagggctggaaatcctctcaggtggagtgagcagtactgat
attcaaggagatgattgcgctgataaatttggtatgattaatgcatcatcaactcttctg
cagttgatactaacaggagaaaagagagtgtctggagaggctgctgtgaagtttgtaaaa
ttagctttcaactatgaggagtgggatgtgtttgattctgctattgtatttgttactaat
tttcttcaggcccagaatgacccaaagtggaagaaggcagaaatggaactccaacttctt
accttgatgcgaccgttactatttccaggaaaatttaggcatggtttttctgttgatgaa
agtaatactaggagagatcatttgccttgtgtttcagataagaagagtacagtcagaaca
ggttccttaaagcatggagagccttctcatgatcttatcattttggcaacaacagtgttc
tcctgtgtctctacatctaagcagaacatcctacctgacaaggaaatactttttgatgtc
ctggtgtttttgtggcagaagtgtaaaacaggacttcagttaaacccgatgaatggaagt
ggctactttaaatataaccacaaatacaaagcttccaaatgggtttatgtactctggata
ataaatgaagtgattctgcaaagtaatgtagcagatactgatgttgtaatggcagcagag
ataaccttatgtctaactgcagtactggaaagtatggctgattctgcaagtaaatctaag
aaaaaagcagggaaaagaagtgtaattctctctgtagatgaaacctgtgacattcctgaa
atactaatgagaagtcctacagaacaactgcagcttgcttatgaaaatcttgaaaaaaca
attaacgaaatgaacaaatctcgcttaatgaccttcgtaccagatggaaagtcagtattt
gacaactgctgtacaaaggtgggctcacatggccagaatctgagttctgttttggaatgg
agtaatgataagacaagaacaggaaatatttttttaatggatttacatttggagctcatt
caagcccaacatcgaatagccgtgaaacttcttaaactgacacaaggtgttcaaaaggat
ggcagaaatcttaagtctggcgagcatcatgtgaagaagattgaagattcccattattta
acagaggcagatataatgggaaaaataaagaagaataagctatccagagcaatctttttg
atggaaaaagctgtacagatgttccctaaagacctaagtacttattcccaaaggcagcta
ctgcaggaggcgctaactttaattgaacaagttgaagctgaacaaactgcgttgtatcac
agtctgaaagaattcatgagcagcaagaaaaaaaacaagattcctcctcctcctctctta
ctttctagatcacattgctccatgacatttaaaccagcctcattctcctcagatgttcag
gttgcgtggtacagtattttgggctgtgtagcaggagaaaataattcaaaagtaagatta
aataacaataaacttccaaatgctggagaagagatacttgctgatggaaaaagcctcttg
gaaatacaaggcttagatcccaatgagaaatacatatttgctgttgcagcatattcttct
gatggaaaacttattggtgatgctattggggaaacaactaggccaatcctcgcatatcca
cctctttctgctactactgttcgagcttatctaactcaggtagcctatcagactggcaac
tacacgttagccagaggagcattttcaccgatgtgggattattttgtttcaaattcttct
ccactgcccaccaatgcagctgttatttccgcaagaagtactttgactatatctgaaaag
aggttacgtttcgaggctgtatctcagacctctcctatcgccttgtatctctttctgagg
aatatttttgctgtttgtgacattaatgtcatggaaggagcactcttctgtgattccatt
tattgcaatgagatactttataaggaacaagttgctagattagcagaatgtgagagaatg
actgtggcaattgaacttagtaatttcttgaatgatgcaagttacgcactgcagtctgtt
gtacaatgctatggtctccttgctccaattatttatcacaagatttctgcagtgccagta
gttcagattctcattaagtgcttggctgtccttcaagaaattccaagtgctactttgcag
aggcgacaggcaggctgttatgagagtattcagcatatgatagcttgcacttcattttat
acagcaaaggttctacgttcattgaaggaatatgaactagcagtgattattattaactat
gggaaaaaattgttggattcctcacaaagaacctcacctggccagtcaggagctacagaa
agtgaagaaacgcataaaattaagaaggcttctgcaaggacatcccatttagctgcaatg
gaaaaagcaacagaaaatctaagtgctcttgaatcatatctcctaagactgacacaacca
gctcgtggatcagagcttgcgggacaggaagatcctttgttcctctaccccataatttca
tgttggacatcaaacactgcttatcgagaagtgatgaaattcagaaagaaatcacgtttt
cttgagttctttattcaagttttgcacaaaatcctgaatgaagagaaattccacagtgtt
ctggaatgggcagaaaatgtgcaaacttacttgaaaaggaggaacaaccacattctctgt
atcaatgaaactccaagatgtaaaacaagctctcccggtgagcctgagggcaccaagaag
tacgctgtaggaattaaggagaaaagtatggagacctcacctttaaagaagaaggaagca
tcagctttgaagaaacaaagaaaagaaactccgagtgctactagaaagaggcagactctt
agacagtattttgcaaaacatccaaacataatgaaatctccagaagcacaaaggaatctt
acagaagaattacaaaaagtagctcgcaacaccttagtggtactgctgaaaccaattgtg
agtagttacttaaaccaaaagaagtttcatcagatatgtcttgaagagatgccctggagg
tcccagatgaatatttatctggcaactgcacactacaacttatttaaaaagaagctggaa
gaacaatataacattggaatttatggttcgcgtcgtcaagacagttacagtattctggat
cctgagatattctcattaaataattctggaactgtagtggtgagagaagctctggagagt
aacagaagagcatcaaatcctcttcctcttgagaagtcaccttcagagctgaccaaaaaa
caaacatatggatcttctgagcacaacactaaattgtggggaagagatacacctcaaact
cagatgacaaatgatatgcaaatatccatctcactttctcccaaagaacgcaagcagttt
ccatcagataccattttattggaccattttacaaaaatctttctacacttaagaagagca
gcagttcttgctcaccgtggaggccactggacattgcttcaaaatgcatgcagagaactc
tggaactatactcaagaatcacagtcaattgctaaccattcccattcccacaaggatgca
tttcccattaccagggagtttcttaggaacacagtttggttgccattttatttggcatca
gacatgattattgatatgataactgaactacaagcaagcaattctcttaagattgtggag
cctgaaggagatttctgcattcccagttgcttaggaggtattactgatgagaacggtggt
tcgaatctccatccacagtctcccttggatgatgtgaatgtggttgacttgaaatggata
tgtaatctgattcttaaaacattagaatttttgtatcaaatgaagaaatgggaagcactg
atacacatagctgtacagtttaatgtatttacacatgagagatatacagaacaagtgagt
ccattgctggtgtacgctcagaggcaactactggaaaggatacagcagttcagtggccca
gatagtcatgaatctcatttcacaaaatatctatctgataatgcaaataagatgagctgc
agagattatatagggaagaatctacagctaccttttgcccattctgctagtgtactgatc
tttcccgactgctttttgtatcctgagttgaaaaatgattatgcagatggcactcaaatc
aaacccatagttcatgtacctcttgatgtaaaggacacactgaaatgttttagagaaact
ctaaaaaaatctaaatatcacagccgaacattgagacacagcagaaaactgctttcactt
tttctcgcgtacacacaagaaaatgttggaagaacaatcagtcaaatctctccaaataga
aggctggaatttaatgtgggagccgaactggcgtttctaccaacaccgagtgacccttct
caagaaaaatttaatttctccagtagcattgagagtaaaccaataccacactcacagctt
tcattaattgtctcttcctatgaacaaacaattgaaatccttgaaataaacaaccagaga
gacctcaaagttcaggctctacacgaacttggaaatcttcacttttttgctggaaacaaa
agagctgcttttaaacattggtgtcaagcccttgatgaaacactcaacattgctgatatt
cttaacacctggcaagagttaggctttccaaaaaatgctatggagtgctttgaggttgga
agatctactgatattagtcagaaatttttatctcaggctggaatttggggatgtttgcat
gcagcagttttagtagctaagatagctcagtatataacaacatcaaatgtgagattaaga
actaagtattgcctcttttctgctatactctttaagactctgtttagggcctctcttcca
catcccacatctgactgtgactttgcacagtatgaaacacatgtgcttattcctggaatt
gacttgttctctgatcgctacagagctgacatctccaccgtagttgcaagtctgaatttc
cttatgtctgaattgcactgtgcaaagcaaaatttaacaattttacctttgttcacatta
taccaatactttgtttctgagatttgtaaggaccctgctaaatgcattgaaggaagaatc
ttcaagattaaagtacttacagatataggattttttacagaggcctttcatgaactgtat
ttacttaactgtggagaaagaatcccatggaaaataccggcagggtacaaaaaaaccgaa
gaaacgaagagcttactgtactttgactcctcaaaatccctcctgagttttacaaattta
caggtactggaggacatatttaattggagtctgtctttaacagtagtgccactgtgcgac
caacaaattatgaataaattaatcttagccaaaatgcatttcatcatttgcctttctgac
acaataaataatacacctgaaaaagtagaaaaatgcatatattctgttgataacaagatg
gatggagttacaccatcaaatgaaaaagttgatgctgtgaagaattcaagacaacgggaa
caaagagacacagtgatgcagctcattaactgtaaagctgaattaaatatgaccatgctg
aagggaattttgttaacagaagctgaagaaagtcttaaccatcttgtgcagaacatacag
gacaagtatgatgggaagatatccctgtgttctgcagaagatttagaggttcttattgaa
gccaaacttcagcttgcagctatttctcagcagtggcaccgagcagctttcagtgttgct
ttggctttctctgcaattcgacttctccaagatgcagatatttttaggatgacagcaaca
agttttcaagaaaaaaaggataaaagggagagtttggattcttgtgttgaagatgctcaa
cagcttcacagttctatagcagaagatcatctgaatatacatctgtggctaaggtgtcgt
aaaatgttagtgactgcactagcaacacagctacccggtgttggtgataaggaagaaaat
tatgtggctgaacgtaaaagtattataaaagaagtaatattagaggcagaagcctttggt
gatattgagactcaggctgaaatgatggtgcaagcagcaattcttgacctgcaagaagga
tgtcccacagctgatattgaacttcttttgcagaatatcatcagtttactccaagaggat
aaatttatttctcctccagcttctttgactcttgtgaaaagtatgcttctgatgacagat
gtgctcgcactgcaaacagtagagaatatggaaaattgttcttctgcagtggaaccatta
aacttactaaatttggcacatgaaatcaccttgaaagaaatttttttttgcggagaatat
attgaacagcagatagaagacagtacaatgacctgccttgtcctacctgcaaaaaatatc
tacttgccctatataaaccttctggcccaagtcaaaatgagaattggaaacacattagct
gaaagagtagcttgcacacctgaaagagaagatccgctgcaatggttatgtgctctcaaa
catttagaaacagcactgaagctctgcagagcatctgcaacaaaagcattagatatggaa
gctcaacttctttttcagataggtaaggtggaatgccagataaccaaagcaggcagtaac
aagtcatatcgagctgttgaaaccctgctggaagctataaaactgagccaggaacacgat
caaaactttgagctaatcagaagatcataccttgaaatagcactattatatttgcatttt
gccacgaataatgagaatttgtcacaaagagacaagatggtagcttcaaaatcagagatc
tctgctggagaactttcttcctctcctggtgaggctctgaaatcagaaggctgtaaagta
cgaggttggattgcagtaagagcagccagacaggtcagtgaagcagtggttgcctctcag
ctattaactggaatggagagcattaaagaaaacaatgtgaaggatacagtacagcagaaa
atcccagaatttgcttccatggatcttcttgcttcatacagagattacttgtctgatgga
tacaatgttgtttgtggaagtcatacagcatcttctactgaagataaacaaatcataaag
gagcagaatcaaaatgaaggaatggaatgccttgacaccagctccagccagaagaaagag
ataataacatgggttcacctaattcgataccatagttatataaaagggctttgtcacgca
aacctatttgctgcccataaatcaggacttggatcactttctgaaagagatggacgcttg
aattctctttttgactcacggattgttctacgtgttgcagaaatgcattcctttctcaaa
aaacacctatttgaatattcagtgtgttgtctcgagagcttcccagaacagctacaagat
ttagaagtgtcacatggtagtccacctgattcttcaaaggcgtctcttgaaaattctgga
attttgtgtgtggagatagcttctccagtttctgccatcacagaagcagacggtcagaca
gagagtagggcaacaaatgcttcaaataaagaaattatcattcagtggtatattcctcct
ctggcaaagccaaccaatgatacggagactaagattttgctgctttatgcttataataca
gagcctgtcaagatcagcaatgtcaagtttttcagttcagtgtctgtgttttcaggtcag
ttgtggattccattagcgagaattatttctttgagagagaaattatctaatctgaaacat
caagttgaaatgctgatgcaaagtttgggaaactcttcagctgcagaacctacaggtttt
cttgaacaaaatgaaacgctgaaaacaagtccttcagaaaaaactgaaatgaatattgca
agagtgcatcttgatgaaaaaacagaagaaatggctataaggtgcttatctgaagtcaaa
gctctgctctctgctgttccagtcatgaccttgccattaactgagattccatttgacatt
actttgcaatcaatagcaagtttggaagacatgtttgatcttgcaaatggttgtacaata
actgaagaaagtcttttcagttggatcatttctcttttccactaa
DBGET
integrated database retrieval system
