Lagopus muta (rock ptarmigan): 125691561
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Entry
125691561 CDS
T09141
Symbol
NFKB1
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear factor NF-kappa-B p105 subunit
KO
K02580
nuclear factor NF-kappa-B p105 subunit
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut04010
MAPK signaling pathway
lmut04210
Apoptosis
lmut04218
Cellular senescence
lmut04620
Toll-like receptor signaling pathway
lmut04621
NOD-like receptor signaling pathway
lmut04622
RIG-I-like receptor signaling pathway
lmut04623
Cytosolic DNA-sensing pathway
lmut04625
C-type lectin receptor signaling pathway
lmut04920
Adipocytokine signaling pathway
lmut05132
Salmonella infection
lmut05164
Influenza A
lmut05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
125691561 (NFKB1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
125691561 (NFKB1)
04218 Cellular senescence
125691561 (NFKB1)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
125691561 (NFKB1)
04621 NOD-like receptor signaling pathway
125691561 (NFKB1)
04622 RIG-I-like receptor signaling pathway
125691561 (NFKB1)
04623 Cytosolic DNA-sensing pathway
125691561 (NFKB1)
04625 C-type lectin receptor signaling pathway
125691561 (NFKB1)
09152 Endocrine system
04920 Adipocytokine signaling pathway
125691561 (NFKB1)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
125691561 (NFKB1)
05168 Herpes simplex virus 1 infection
125691561 (NFKB1)
09171 Infectious disease: bacterial
05132 Salmonella infection
125691561 (NFKB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lmut03000
]
125691561 (NFKB1)
Transcription factors [BR:
lmut03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
125691561 (NFKB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Ank_2
Ank
Ank_4
Ank_3
Ank_5
Death
Motif
Other DBs
NCBI-GeneID:
125691561
NCBI-ProteinID:
XP_048796949
LinkDB
All DBs
Position
4:41220585..41278724
Genome browser
AA seq
986 aa
AA seq
DB search
MAGEDPYIMGVSDPQMFAMDQLMGMNTIFNNTGYITSDLPLRTADGPYLQIIEQPKQRGF
RFRYVCEGPSHGGLPGASSEKNKKSYPQVKICNYVGPAKVIVQLVTNGKYVHLHAHSLVG
KFCEDGVCTVNAGPKDMVVGFANLGILHVTKKKVFETLETRMIDACKKGYNPGLLVHPEL
GYLQAEGCGDRQLTEREREIIRQAAVQQTKEMDLSVVRLMFTAFLPDSNGGFTRRLDPVI
SDAIYDSKAPNASNLKIVRMDRTAGCVTGGEEIYLLCDKVQKDDIQIRFYEEDENGGMWE
GFGDFSPTDVHRQFAIVFKTPKYRDVNITKPASVFVQLRRKSDLETSEPKPFLYYPEIKD
KEEVQRKRQKLMPNFSDGYGGGSGAGGGGMFGGGGGGAGSGFSYPSYGYSAFGGMHFHPG
TTKSNAGMKHELSNSTVEKDEESSDKQSGKWDTKHDVKVESVEKNECRTSGHNEEKEDAS
LCCKDEGNKAKCGCQDGLFLEKAMQLAKRHCNALFDYAVTGDVRMLLAVQRHLTAVQDDN
GDNVLHLSIIHLHRELVKNLLQVMPDMNYNSIINMRNDLYQTPLHLAVITKQAEVVEDLL
KAGANVNLLDRHGNSVLHLAAAEGDDKILSLLLKHQKASSMIDLFNGEGLSAVHMVVMAN
SLSCLKLLIAAGVNVNAQEQKSGRTALHLAVEQENIPLAGCLLLEGDADVDSTTYDGTTP
LHIAAGRGFTKLAAVLKAAGADPHIENFEPLFDVEEDVKDDDDEGIVPGTTPLDMAANWE
VYDILNGKPYVAAAAVSEDLMTQGPLKELNESSKQQLYKLLETPDSSKNWSTLAEKLGLG
ILNNAFRLSPSPSKTLLDNYKISGGTVQELIAALRQMDHTEAIEVIEKALSSSQSQPHQE
DNTTEAFPISSPANFAKGETGELYNHKFQDTESTCDSGVETSFRKLSFTYSDSLNSKSSL
TLSKMTLGYGRKAQSKAIIYLTSNFN
NT seq
2961 nt
NT seq
+upstream
nt +downstream
nt
atggcaggagaggatccatatattatgggagtgtcagatccccaaatgtttgcaatggac
cagcttatgggaatgaatacaatatttaataatacaggctacatcacttcagacttacca
ctacgaacagcagatggaccgtaccttcaaatcattgaacagccaaaacagaggggcttt
cgattccgatacgtatgcgaagggccttcacatggtggacttcctggtgcttccagtgaa
aagaacaaaaagtcatacccccaagtcaagatttgcaactatgttggacctgcaaaagta
attgtccagttagttactaatgggaaatacgtccacttacacgctcacagcttggtgggt
aaattttgtgaagatggagtgtgcacagtcaacgcaggaccgaaagacatggttgttggg
tttgcaaaccttggaatacttcacgtcacgaagaagaaagtgtttgaaactctggaaacg
cgcatgatcgatgcttgcaaaaaagggtacaacccaggactcttggtgcatcctgaactt
ggctatctgcaggcagaaggatgtggagacagacagctaactgaacgagaaagagaaatt
attcgccaggcagcagttcagcagacaaaagaaatggatctcagtgtggtgcgtcttatg
tttacagcctttcttcctgacagtaatggtggtttcacacggaggcttgatcctgttata
tcggatgcaatatatgacagcaaagcacccaatgcttccaacttaaaaattgtaagaatg
gacagaacagcagggtgtgtaacaggaggggaagagatttaccttctctgtgacaaggtt
cagaaagatgatattcaaatacgtttctacgaagaggatgagaatggtggtatgtgggag
ggctttggagacttttctcctacagatgtacatagacaatttgctattgtgttcaaaaca
cccaagtatcgagatgtcaatatcacaaagccagcatctgtatttgtacaactacgtcgg
aaatctgatctagaaacgagtgaaccaaagccttttctctactatccagaaatcaaagat
aaagaagaagtgcagaggaagcggcagaagctcatgccaaacttctccgatggctacggt
ggaggcagcggcgcaggaggcggtggcatgtttggaggaggaggcggcggtgctggctct
gggttcagttatccttcttacggttactctgcttttggaggaatgcatttccaccctggc
acaacaaagtccaatgctggaatgaaacatgagctgtcaaatagcacagttgaaaaagat
gaagagagctctgataaacaaagtggcaaatgggacacgaaacacgatgtgaaagtggaa
agtgtggagaagaatgagtgcagaacctctggtcataatgaggagaaagaggatgcttct
ttgtgctgtaaagatgaaggaaacaaagcaaagtgtggctgtcaggatggtctgttcctg
gagaaggctatgcagctcgccaagcgtcattgcaatgctctctttgattatgctgtaact
ggagatgtgaggatgctgctagctgttcagcgccacctcactgctgtccaggatgacaat
ggagacaatgtccttcatttgtcaattatccaccttcatagagaactggttaaaaacctg
ttgcaagtgatgccggacatgaattataacagcattatcaacatgagaaatgacctttat
cagacccccttgcacctggcagtaatcacaaagcaggcagaggtggttgaagacttgctg
aaggctggagcaaatgtcaaccttctggatcgccatggtaattctgtcttacatttagct
gctgctgaaggagatgacaagattctgagtctgctcctcaagcatcagaaggcatcttca
atgattgaccttttcaatggcgaaggtctcagtgcagttcacatggtggtgatggccaat
agcttgtcctgtctgaaactactgattgctgctggagttaacgtcaatgctcaggaacaa
aaatctggacgaactgcattgcatttagctgttgagcaagagaacatccccttggcaggc
tgccttttgcttgagggtgatgcagatgtggacagcactacctacgatggcacaacgcct
cttcacatagcagctggaaggggctttacaaaactggcagcagttctcaaagcagcaggt
gcagatcctcacattgagaactttgagccactctttgatgtagaagaagatgtgaaagat
gatgatgatgaaggaattgtacctggaacaacgccactggatatggcagccaactgggag
gtatacgacatattaaatggcaaaccctacgtggcagcagcagcagtttcagaggactta
atgacacaaggccctctgaaagagctgaatgaaagctccaagcagcagctttacaagcta
ttggaaacacctgattcaagcaagaactggtctactctagcagaaaagttgggtcttggc
attcttaataatgccttcaggttgagcccttcaccttcgaaaactctgctagataactat
aagatttctggaggtacagttcaagagctgattgctgctttgagacagatggatcacacg
gaagctattgaagtaattgagaaagcactatctagttcacaaagtcagcctcaccaggag
gacaacacaacagaagcttttcctatatcatcaccagccaattttgcaaagggagagaca
ggtgaactttataatcacaaatttcaagacactgaaagcacgtgtgacagcggggtagag
acctccttccgcaaactgagctttacttattcagactctctgaacagcaagtcatcacta
acacttagcaaaatgaccctgggctacggcaggaaagctcagagcaaagcaattatatac
ctaactagtaacttcaattag
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