Lagopus muta (rock ptarmigan): 125691715
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Entry
125691715 CDS
T09141
Symbol
RAPGEF2
Name
(RefSeq) rap guanine nucleotide exchange factor 2 isoform X1
KO
K08018
Rap guanine nucleotide exchange factor 2
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut04010
MAPK signaling pathway
lmut04517
IgSF CAM signaling
lmut04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
125691715 (RAPGEF2)
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
125691715 (RAPGEF2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
125691715 (RAPGEF2)
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Gene cluster
GFIT
Motif
Pfam:
RasGEF
RasGEF_N
RA
cNMP_binding
PDZ
PDZ_6
RA_2
PDZ_2
Motif
Other DBs
NCBI-GeneID:
125691715
NCBI-ProteinID:
XP_048797321
LinkDB
All DBs
Position
4:3195347..3365553
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AA seq
1653 aa
AA seq
DB search
MASYVDNSFRQAVMKNPAERSPQDLEIVYSYLHGMEALSNLREHQLRLMCETVRYERHEA
NEVLYYPDDIGTCWYILLSGSVFIKESMFLPRSSFGKRSAGSFRRGCECIVLEPSEMIVV
DYMDENEEYFQRQASHRQSRRRFRKINQKGERQTIIDTVDPYPVGKPPLPRGYHTECTKP
QLPADFTKLHLTDSLHPQVTHVSSSHSGCSITSDSGSSSLSDIYQATESEAGDMDLSGLP
ETAVDSEDDDDEEDIERASDPLMSRDIVRDCLEKDPIDRTDDDIEQLLEFMHQLPAFANM
TMSVRRELCAVMVFAVVERAGTIVLNDGEELDSWSVILNGSVEVTYPDGRTEILCMGNSF
GVSPTMEKEYMKGVMRTKVDDCQFVCIAQQDYCRILNQVEKNMQKVEEEGEIVMVKEHRE
LDRTGTRKGHIVIKGTAERLTMHLVEEHSVVDPTFIEDFLLTYRTFLSSPMEVGKKLLEW
FNDPSLRDKVTRVVLLWVNNHFNDFEGDPAMTRFLEEFENNLEREKMGGHLRLLNIACAA
KAKRRLITLTKPSREAPLPFILLGGSEKGFGIFVDSVDFGSKATEAGLKRGDQILEVNGQ
NFENVQLSKAMEILRNNTHLSITVKTNLFVFKELLTRLSEEKRNGAPHLPKIGDIKKASR
YSIPDLAVDVEQVIGLEKVNKKSKANTVGGRNKLKKILDKTRISILPQKPYNDIGIGQSQ
DDSIVGLRQTKHIPPALPVSGTLSSSNPDLLQSHHRILDFNTTPDLPDQVLRVFKADQQS
RYIMISKDTTAKEVVIQAIREFALTATPDAYSLCEVSVTPEGVIKQRRLPDQLSKLADRI
QLSGRYYLKNNMETETLCSDEDAQELLRESQISLLQLSTVEVATQLSMRNFELFRNIEPT
EYIDDLFKLKSKTGCTNLKKFEEVINQETFWVASEILRETNQLKRMKIIKHFIKIALHCR
ECKNFNSMFAIISGLNLAPVARLRTTWEKLPSKYEKLFQDLQDLFDPSRNMAKYRNVLNS
QNLQPPIIPLFPVIKKDLTFLHEGNDSKVEGLVNFEKLRMIAKEIRHVGRMASVNMDPAL
MFRTRKKKWRSLGSLSQGSTNAAVLDVAQAGGHKKRVRRSSFLNAKKLYEDAQMARKVKQ
YLSNLDLEMDEESLQTLSLQCEPATNTLPKNTGDKRSGKSETSPVAPRAGIQQKVQQQQQ
QHKANQALQVPAVSLYPSRKKVPVKDLPPFGINSPQALKKILSLSEEGSLDRHKKQSEDA
VSSASSHLSSPPTSPQSSPRKGYTLAPSGTVDNFSDSGHSEISSRSSIVSNSSFDSMPAS
LHDERRQRHSVSIVETNLGVGRIDRRIVIEPDQYSLGSYAPLSENRGLYAGATVLSSPST
EELSQDQGDRASLDAADSGRGSWTSCSSGSHDNIQTIQHQRSWETLPFGHVHFDNSGDGA
GLWASGSHVDQLMFSDHGTKYGRQSQGREGLEQAQSRASWASSTGYWGEDSEGDTGTIKR
RGGKDVSIEAETSCVTSIPAEEAKPAPVPAHIPVTSSTTKGLIARKEGRYREPPPTPPGY
VGIPIAEFAEGVSHPTRKPPDYNVALQRSRMVARTCETHGTSAQQQQSHGHSTSRPVSKP
QWHKPNESDPRLTHYQSQGFPTEEDEDEQVSAV
NT seq
4962 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcctacgtggataatagcttccgccaggcggtgatgaagaacccggcggagcgg
agcccccaggatttggagattgtgtattcgtatttacatggaatggaagccttgtctaat
ctgagagaacatcagctaaggctgatgtgtgaaactgttcgatatgaaaggcatgaagca
aatgaagttctgtactaccctgatgatattggtacctgttggtatatcctgctgtctggt
tcagtcttcattaaagaatcgatgtttcttccaaggagcagttttggcaagcgttctgca
ggaagcttcaggcgtggctgtgaatgcattgttttagagccttctgaaatgattgtggtt
gattatatggatgaaaatgaagaatattttcagcgccaagcttctcacaggcaatctcga
aggaggtttaggaaaatcaaccaaaaaggggagcgacaaacaattattgatactgttgat
ccttatcctgtggggaagccacctctgcccagaggctaccatacggaatgcactaaacct
cagcttcctgcagatttcacaaagctgcaccttactgacagtctccacccacaggtgacc
cacgtttcatccagtcactcaggatgtagcatcacaagtgattcgggaagcagcagcctt
tctgatatctaccaggctacagaaagtgaggctggtgatatggatctcagtgggttgcca
gagacagcagtggattctgaggatgatgatgatgaagaagacattgaaagggcatcagat
cctttgatgagtagagatattgtcagagattgcttggagaaggacccaatagacaggaca
gatgatgacattgaacaactactggaattcatgcatcagttgcctgcttttgccaacatg
acaatgtcagtgaggagagagctctgtgctgtaatggtgtttgcagttgtggagagagca
ggaactattgtactgaacgatggggaagagctggattcctggtcagtcattctgaatggc
tctgtggaagtgacgtatcctgatggaagaacagagatactgtgcatgggaaacagcttt
ggagtttcccctaccatggaaaaggaatatatgaaaggagtgatgagaaccaaagtggat
gactgccagtttgtttgtatagctcagcaagattattgccgcatcctcaatcaagtggaa
aagaacatgcagaaggtagaagaggaaggagagattgtgatggttaaggagcacagagag
cttgatcgcactggaacaagaaaaggtcacattgtcatcaagggaacagcggaaaggtta
acaatgcatttggtggaagaacactctgtggtagacccaacatttatagaagacttcctg
ttgacatatcggacctttctttccagcccaatggaagtggggaaaaagttgttggagtgg
ttcaatgaccccagcctcagggataaggttacacgggtagtattgttgtgggtgaacaat
cacttcaatgattttgaaggagatcctgctatgactcgatttctggaagaatttgagaac
aatttggagagggagaaaatgggtggacatttgaggctgttaaatatcgcttgtgccgct
aaagcgaaaagaagattgataaccttaacaaagccatctcgagaagcccctttgcctttt
atcttactgggagggtcagaaaaggggtttggaatctttgttgacagtgtagattttggt
agtaaagctacagaagcaggcctgaaacgtggagatcagatattggaagtgaatggtcag
aacttcgaaaatgttcagctgtcaaaagccatggaaatccttagaaataacactcatctg
tctatcactgtgaaaaccaatttatttgtttttaaagaacttttaacacggttgtcagag
gaaaaacgaaacggtgctcctcacttgcctaaaattggtgatattaaaaaggcgagccgt
tattccatcccagatctggccgttgatgtggaacaggtaataggattagagaaagtaaat
aagaaaagtaaagccaacacagttgggggaagaaataagttaaagaagatacttgacaag
actcgaatcagcattctgcctcagaaaccatacaatgacattggaattggccagtctcag
gatgacagcattgtaggactgaggcaaacaaagcacattcctcctgctttacctgtcagt
ggaaccctgtcatccagtaatcctgatctactgcagtctcatcaccgcatcttggacttc
aatacaactccagacttaccagatcaagttctgagggttttcaaggcggaccagcaaagt
cgctacatcatgatcagtaaggacacaactgcaaaagaagtggtcatccaggccatcagg
gaatttgctctcactgctacccctgatgcgtattcactatgtgaagtctctgtcacacct
gagggtgtaatcaaacaaaggaggcttcctgatcagttatccaagcttgctgacaggata
cagctaagtggcagatattacctgaagaacaacatggaaacggaaactctttgttcagat
gaagatgctcaagagttattaagagagagtcaaatttccctgctgcagctcagtaccgtt
gaggtggccacccagctctccatgaggaactttgagctattccgtaatattgaacccaca
gaatacatagatgacttgtttaaactcaaatcaaaaacaggctgcactaatctaaagaag
tttgaagaagtgataaatcaagaaacgttctgggtagcttcggagattctaagagaaacc
aaccagttgaaaaggatgaaaatcatcaagcatttcattaagatagcactacactgcaga
gaatgcaagaatttcaactcgatgtttgctatcattagtggcctgaatttggcaccagtt
gcaaggctccgaactacttgggaaaagcttccaagcaagtatgaaaaactgttccaagat
ctacaggacttgtttgatccatctaggaacatggcaaaataccgtaatgtccttaacagc
caaaatctgcagccccctattattcccctgtttcctgttatcaaaaaagaccttacattc
cttcacgaaggaaacgattccaaagtggaaggcttagtcaactttgagaagctgaggatg
atcgcgaaggaaattcgccacgttggtcgcatggcgtctgtcaacatggatcctgcttta
atgttcagaactaggaagaagaaatggaggagtttggggtctctcagccagggcagtaca
aatgcagctgtgcttgatgtcgcacaagcagggggtcataaaaagagggtccgtcgcagc
tccttccttaatgctaaaaagctctatgaagatgctcagatggcacggaaagtgaagcag
tatctctcaaacttggatctggaaatggatgaagaaagcctccagacgctgtctctacag
tgtgagccagccaccaacacattgccaaagaatacaggagacaagcgatctggaaaatcc
gaaacgtcaccagtggctccccgggcaggaattcagcagaaagtgcagcagcagcagcag
caacacaaagcaaaccaagctctgcaggtccctgctgtatctctttatccctctcgcaag
aaagtgcccgtcaaagacctcccaccatttggcattaactccccacaagctttaaagaaa
attctttcattgtctgaagaaggaagtctggaccgccacaagaagcaatctgaagacgca
gtatcaagtgcatcttcacatctgtcttctcctcccacctcaccacagagttctcccagg
aaaggttacactttggctcccagtggcacagtggataacttttcagactctggtcacagc
gaaatttcttccaggtctagtattgtcagcaattcctcttttgactctatgccagcgtcc
ctgcatgatgagaggagacagaggcattctgtcagcattgtggagactaaccttggcgtg
ggaagaattgatagaaggatcgtgattgagccagatcaatacagcttaggatcttatgca
ccgctgtcagagaacagaggcctgtacgctggagctactgttctgtcttctcctagcacg
gaagaactgtcacaggatcagggggacagagcttcactcgatgcagctgacagtggccgc
ggtagctggacttcttgctcaagtggttcccatgacaacatacaaacaatacagcaccag
agaagctgggagacgctgccttttggacatgttcattttgataactcgggcgatggggca
ggactgtgggcctcaggcagtcacgtggaccagctgatgttctccgatcatggcacaaag
tatggccggcaaagtcaaggcagggagggcctcgagcaagcgcagtccagagcaagctgg
gcatcctcaacgggctactggggagaggactcagaaggtgacacaggtaccataaagcga
aggggtgggaaggatgtttctattgaggctgaaaccagctgcgtaacatccataccagca
gaggaggcaaagccagctcccgtgcctgctcacataccagtaacatcaagtactacaaag
gggcttattgcacgaaaagaaggtcggtatcgggaaccacctccaactcctcctggttat
gtcggaatacccattgctgagtttgcagaaggtgtttcccatccaactagaaagcctccg
gattacaacgtagcacttcagaggtctagaatggtggcacggacgtgtgagacccatggg
acgtcagctcagcagcagcagtcacatggccattcaactagcaggcctgtgagcaaacct
cagtggcacaaaccaaacgagtcagatccacgtcttactcactatcagtctcaagggttt
cccacagaggaagatgaagatgaacaagtctctgctgtttaa
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