Lagopus muta (rock ptarmigan): 125691830
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Entry
125691830 CDS
T09141
Symbol
DCTN1
Name
(RefSeq) dynactin subunit 1 isoform X1
KO
K04648
dynactin 1
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut04814
Motor proteins
lmut05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
125691830 (DCTN1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
125691830 (DCTN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lmut04131
]
125691830 (DCTN1)
03036 Chromosome and associated proteins [BR:
lmut03036
]
125691830 (DCTN1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lmut04812
]
125691830 (DCTN1)
Membrane trafficking [BR:
lmut04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
125691830 (DCTN1)
Chromosome and associated proteins [BR:
lmut03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Dynactin complex
125691830 (DCTN1)
Cytoskeleton proteins [BR:
lmut04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dynactins
125691830 (DCTN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dynactin
CAP_GLY
Motif
Other DBs
NCBI-GeneID:
125691830
NCBI-ProteinID:
XP_048797667
LinkDB
All DBs
Position
4:complement(70803725..70842881)
Genome browser
AA seq
1293 aa
AA seq
DB search
MAQSKRHPHGRASSAGPRMSTETSGKPLKVGSRVEVIGKGHRGTVAYVGATLFATGKWVG
VILDEAKGKNDGTVQGRKYFTCEENHGIFVRQSQIQVFEDGADTTSPETPESAALKVPKR
DSLDAAKGSKLRGAKPKKAPAARKTTARRPKPTRTPTSAPSGSTAGPSGSASASGGEMSS
SEPSTPAQTPLVAPVIPSPSLTSPVAPMVPSPTKSCPAVGQSVQEDQEEENLRSQVRDLE
EKLETLKIKRNEDKAKLKELEKYKIQLEQVQEWKSKMQEQQADLQKRLKEARKEAKDALE
AKERYMEEMADTADAIEMATLDKEMAEERAESLQQEVDSLKEKVEYLTMDLEILKHEIEE
KGSDGAASSYQVKQLEEQNARLKEALVRMRDLSASEKQEHVKLQKQMEKKNTELESLRQQ
REKLQEEVKQAEKTVDELKEQVDAALGAEEMVETLTERNLDLEEKVRELRETVGDLEAMN
EMNDELQENARETELELREQLDMATARVREAEKRVEAAQETVADYQQTIKKYRELTAHLQ
DVNRELMSQQEASAEKQQQPPPEMFDFKIKFAETKAHAKAIEMELRQMEVQQANRHVSLL
TSFMPDSFLRHGGDHDCILVLLLIPRLICKAELISKQAQEKFELNENCAARAGLRGAAGE
QLSFAAGLVYSLSLLQATLHKYEQALNKCSVEVYKKVGMLYPEMSVHERSLDFLIELLHK
DQLDETVNVEPLTKAIKYYQHLYSIHLAEQAEDCTMQLADHIKFTQSALDCMGVEVCRLR
AFLQAGQEASDLAILLKDLETSCSDIRQFCKKIRRRMPGTDAPGIPAALGFGQQVSDTLL
DCRKHLTWVVAVLQEVAAAGAQLIAPLAENEGLQAVKLEDLAFKVSEQIYGTQGINPYEC
LRQSCSILIATMNKMATAMQEGEYDADRPQSKPTPPAELRAAALRAEITDAEGLGLKLED
RETVIKELKKSLKIKGEELSEANVRLSLLEKKLDSASKDADDRVEKIQMKLDETQTLLKK
KEKEFEETMDALQADIDQLESEKVELKQRLNNQSKRTIEGLRGAPASGVASIVSGIAGEE
QQRGVGAGQAAGGGSTGPVQVKDSPLLLQQIEALQLSIRHLKNENNRLKGAQMKLELAGL
KPLQVAKVSLPQSKHGEGLATLTLYRKSTQLLETLYQMSTNAKVVDTKQTKSGRSAAARL
LEQTARLWAVKGSIEALRDEAMREMVQEQPGAGVPTSFGAFPSSSFLKAQREKEQGLTRF
GRVSIPCAPGHGREQRVLLTPELLLQLQRHFVV
NT seq
3882 nt
NT seq
+upstream
nt +downstream
nt
atggcccagagcaagaggcacccgcacggccgggcatccagcgccggccccaggatgagc
acggaaacgagcggcaaacccctgaaggtgggctccagggtggaggtcatcgggaagggg
caccgtgggactgtcgcctacgtcggggccaccctgtttgccacgggcaaatgggtcggg
gtcatcttggacgaagccaagggcaagaatgatggcaccgtgcagggcaggaaatacttc
acctgcgaggagaaccacggcatcttcgtgcggcagtcacagatccaggtgtttgaagat
ggagctgacaccacgtccccagagaccccggaatcggccgcgctgaaggtccccaagcga
gattccctggacgccgccaaaggcagcaaactgcgtggagccaaacccaaaaaggcaccg
gccgcacggaagaccaccgcccggcggcccaagcccacccggacccccacctccgccccc
tctggcagcaccgcggggccctcggggtcggcctcggcctcgggtggggagatgagcagc
agtgagcccagcacgcctgcccagacgccgctggtggcccccgtcatcccatcgccctca
ctgacctcgccggtggcgcccatggtcccctcacccaccaagagctgcccagcagtgggg
caaagtgtgcaggaggaccaggaggaagaaaacctgcgttcccaagtcagggacctggag
gaaaagttggagacgctgaagatcaagcgcaatgaggacaaagccaagcttaaagagctg
gagaagtacaagatccagctggagcaggtgcaggagtggaagagcaagatgcaggagcag
caggcagacctgcagaaacggctaaaggaggccaggaaggaagccaaagatgccctggaa
gccaaggagcgctacatggaggagatggccgacaccgccgacgccatcgagatggcaacc
ctggacaaggagatggcagaggagcgggcagagtccctgcagcaggaggtggactccctg
aaggagaaggtggaatatctcaccatggacctggagatcctgaagcacgagatcgaggag
aaaggctcggatggagcagcgtccagttaccaggtcaagcagctggaggagcaaaacgcg
agactgaaggaagctctggtgaggatgagggacctctctgcgtccgagaagcaggaacac
gtgaaactgcagaagcaaatggagaagaaaaacacggagctggaatcgctgcgacagcag
agggagaaactgcaggaggaggtgaagcaggcggagaaaacagtcgatgagctgaaggag
caggtggacgctgctttgggcgccgaagagatggtggaaactctgacagagagaaacctg
gacctggaggagaaagtccgggagctgcgtgagaccgttggggacctggaagccatgaat
gagatgaacgatgagctgcaggaaaacgcccgcgagacggagctggagctgcgggagcag
ctggacatggcgacagcgcgggtgcgcgaggcggagaaacgcgtggaggccgcccaggag
accgtggctgattatcagcagaccatcaagaaatacagggagctgacggcgcatctgcag
gatgtgaaccgggagctcatgagtcagcaagaggcgtctgcagagaagcagcagcagcct
cctcccgagatgttcgacttcaagatcaagtttgcagagacgaaggcccatgcaaaggcc
atcgagatggagctgcggcagatggaggtgcagcaggccaaccggcacgtctccctgctc
acctccttcatgccggacagcttcctgcgccacggcggggatcacgactgcatcctggtg
ctgctgctcatcccgcggctcatctgcaaggcggagctgatcagcaaacaggcgcaggag
aagttcgagctgaacgagaactgcgcggcgcgcgcggggctgcggggagcggcaggagag
cagctgagcttcgcagcggggctggtgtactcgctgagcctgctgcaggccacgctgcac
aaatacgagcaagccctgaacaaatgcagcgtggaggtgtacaagaaggtggggatgctg
taccccgagatgagcgtgcacgagcgctccctggacttcctgatcgagctgctgcacaag
gaccagctggatgagacggtcaacgtggagcccctgaccaaagccatcaagtactaccag
cacctgtacagcatccacctggctgagcaggctgaggactgcaccatgcagctggccgac
cacatcaagttcacccagagtgccttggactgcatgggggtggaggtgtgcagactgcgc
gccttcctgcaggccgggcaggaggcgtccgacctggccatcctgctcaaggacctggag
acgtcgtgcagcgacatcaggcagttctgcaagaagatccggcgccgcatgccgggcacg
gacgcaccgggcatcccggcagcgctgggcttcgggcagcaggtgtcagacacgctgctg
gactgccgtaagcacctcacctgggtggtggccgtgctgcaggaggtggccgctgccggc
gcgcagctcatcgccccgctggctgagaatgaggggctgcaggcagtgaagctggaggac
ttggccttcaaagtcagcgagcagatctacggcactcagggcatcaacccctacgagtgc
ctgcgccagtcctgcagcatccttattgccaccatgaacaagatggccacggccatgcag
gagggagaatatgatgccgaccggccacagagcaagcccaccccacctgctgagctgcgg
gcagccgctcttcgggctgagatcaccgatgctgaggggctggggctgaagctggaggac
agggagacggtcatcaaggagctgaagaagtccctcaagatcaagggtgaggagctgagc
gaagccaacgtgcgcctcagcctcctggagaagaagttggacagcgcgtccaaggatgcc
gacgaccgcgtggaaaagatacagatgaagctggacgagacccaaacactgctcaagaag
aaggagaaggagtttgaggagaccatggacgccctccaggctgacatcgaccagctggaa
tccgagaaggtggagctgaagcagcgcctgaacaaccagtccaagaggaccatcgagggg
ctgcgcggggcccccgcctccggggtcgcctccatcgtgtcaggcatcgcaggagaggaa
cagcagagaggcgtgggagctgggcaggcagccgggggcggcagcacggggccggtgcag
gtgaaggattcccccctcctcctgcagcaaatcgaggcgctgcagctctccatcaggcac
ctcaagaacgagaacaaccgcctcaagggcgcacagatgaagctggagctggccggcctg
aagcccctgcaggtggccaaggtgtccctcccgcagagcaagcatggggagggcctggcc
acgctcacgctgtaccgcaagagcacgcagctgctggagaccctgtaccagatgagcacc
aacgccaaggtggtggacaccaagcagaccaagtcaggacgcagcgcggccgcacgactg
ttggagcagacggcccggctgtgggccgtgaagggcagcatcgaggcgctgcgggacgag
gccatgcgggagatggtgcaggagcagccgggcgccggcgtccccaccagcttcggcgcg
ttcccctcctcgtccttcctgaaggcgcagcgcgagaaggagcagggcctgacgcgtttc
ggccgcgtgtccatcccgtgcgcgccgggacacggccgggagcagcgcgtgctgctcacc
ccggagctgctgctccaactccagcggcacttcgtggtgtag
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