Lagopus muta (rock ptarmigan): 125691902
Help
Entry
125691902 CDS
T09141
Symbol
SEC24D
Name
(RefSeq) protein transport protein Sec24D isoform X1
KO
K14007
protein transport protein SEC24
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
125691902 (SEC24D)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lmut04131
]
125691902 (SEC24D)
Membrane trafficking [BR:
lmut04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
125691902 (SEC24D)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
GDP_Man_Dehyd
Motif
Other DBs
NCBI-GeneID:
125691902
NCBI-ProteinID:
XP_048797798
LinkDB
All DBs
Position
4:35314395..35434291
Genome browser
AA seq
1035 aa
AA seq
DB search
MSQQGYVTAPPYSQSQPRMGGFSAGFGPPNSSLHYGRYGDPNSSHTAAPQPGMSKSTVPL
GSSTPLGPLPPGTHQVSQNNFQSAAGQQPHRFPSPLPPNNTGPSCPPGSHQSQPASPNAV
STSCTQLANQLNSMQINSYGPGAIQSSHTSSGHPASFQGPQQLPLTQHQMTLQPGPQIPP
PANNFSGLCAQSSLPNMARQDGIPGSGLPNPNLQQLPGQTPGPGYHPQQANYGPQMAGSQ
LSYPGAFPGGPAQLSGPPQKKLDPDSIPSPIQVIESDKASRGGQMYATNTRGQIPPLVTT
DCLIQDQGHASPRYIRCTTYCFPSSSDMAKQARIPLAAVIQPFAIVPQNETPLYVVNHGE
AGPIRCNRCKAYMCPFMQFIEGGRRYQCGFCNCINEVPPFFFQHLDHIGRRVDHYERPEL
SLGSYEYVATLDYCRNNKPPNPPAYIFMIDVSYRNINSGLVKLICDELKTLLDKLPREEQ
EESSAIRVGFVTYNKVLHFFNVKSNLAQPQMMVVSDVGEVFVPLLDGFLVNFQESRSVVN
NLLDQIPEMFADTNESETIFAPVIQAGMEALKAAECAGKLFVFHSSLPTAEAPGKLRNRD
DKKLLNTDKEKTLFQPQVNCYESLARDCVANGCCVNLFLFPNQYVDIASLGLVTMYTGGT
LYRYNNFQLISDSPQFLTDLRRDIEKKTGFDAIMRVRTSTGFRATDFFGAIYMNNTTDVE
MAAVDCDKAVTVEFKHDDKLNEDSGALIQCALLYTSVSGQRRLRIHNIGLNCSTQLADVY
KTCETDALINFFAKSAFKAILSQPLKVVRDILVSQTAHMLACYRKNCASPSAVSQLILPD
AMKVLPVYMNCLLKSTVLTGRPEIPTDERAYHRQLVMSMGVADTQLFFYPQLLPIHNLDL
KSDAVPAAVRCSEERLSEGGAFILANGLSMFLWLGVSTPPELIQGLFNVPSFAHISAEAT
LLPDLANPYSKKIKSIVEHIQNQKPYTMKLMIVKQREQPEMLFRQFLVEDKSIHGGASYV
DFLCCVHKEICQLLN
NT seq
3108 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaacagggttatgttacagctcctccatattcccaatcccagccaagaatggga
ggcttttctgcaggttttggaccacctaattcttcacttcattatgggcgttatggagac
ccgaactcctcacatacagcagcacctcaaccaggtatgtcgaaatcaactgtgcctctt
ggatcttcgactcctcttgggcctctaccacctggtacacatcaagtcagccagaacaac
ttccaaagtgcagcaggacaacagccacataggtttccaagccctctacctccaaacaat
acaggaccttcctgtcctcctggcagtcatcagtcccagccagcctccccaaatgctgta
tccacctcatgtacacaacttgccaaccagctgaacagcatgcagataaatagctatggt
cctggtgctatccaaagctctcacacatcttctggacatccagcatcttttcagggtcca
cagcaactgccactgacgcagcaccaaatgactttacaacctggaccacagattcctcca
ccagcaaataatttcagtggcctttgtgctcaatcatcgttgcctaatatggccagacag
gatggaatccctggatctggacttccaaatcctaacttgcagcaacttccaggacagact
ccagggcctggatatcatcctcagcaagcaaactatggccctcagatggcaggatctcaa
ctgtcttatcctggtgcttttcctggaggtccagcacagctctctggtccaccacagaag
aagcttgatcctgactcgattccaagcccaattcaagtaattgaaagtgataaagcttct
aggggagggcagatgtatgctacaaacacaagaggacagattcctcctcttgtcaccact
gactgcttaatccaggatcaaggtcatgccagccctcgttatatccgatgtactacctac
tgcttcccgtcatcttcagatatggccaaacaggctcgcattccactggcagctgtcatc
cagccttttgctattgttccacaaaatgagacacctctttatgttgtaaaccatggtgag
gccggaccaatccgatgtaacaggtgcaaggcttatatgtgtcctttcatgcagtttatt
gaaggtggtagaagatatcagtgtggattttgcaattgtataaatgaagtccctccgttc
ttcttccaacatctggaccacattggccggcgggtagaccactatgaaaggcctgagcta
tctctgggatcatatgaatatgttgctactttggattactgccgaaataacaagcctcca
aatccacctgcttatatcttcatgattgatgtatcatacagaaatataaacagtggcctt
gttaaactcatatgcgatgagctgaagactcttctcgataaacttcccagagaagaacag
gaagaatcctcagcaattcgagttggttttgtcacttacaacaaggtcctccacttcttt
aatgtgaaaagtaacttagctcagcctcagatgatggtggtctcagacgttggagaagtt
tttgttcctttgctggatggcttccttgttaacttccaggaatcacgatctgttgttaac
aacttgttggaccagattcctgaaatgtttgcagacactaatgagagtgagaccatcttt
gctcctgttatccaggctggcatggaggcgctaaaggctgcagaatgtgctgggaaactg
tttgtcttccactcttcattgccaactgctgaagcaccgggaaaactgagaaacagagat
gacaaaaagctactcaacacagataaagaaaagacactcttccagcctcaggtgaactgt
tacgagtccttagccagagactgcgtggctaatggctgctgcgtgaatttgttcctcttc
ccaaatcagtatgtggacatagcttccttgggtcttgtcaccatgtacactggaggcaca
ctgtacaggtacaacaatttccagctcatttctgatagcccgcagttcctaactgacctc
aggagggacatagagaaaaagacgggatttgatgcaataatgagggttcgaacaagtaca
ggcttcagggctactgacttctttggggctatttacatgaacaacactacagatgtagaa
atggcagcagttgactgtgacaaggctgtgacagtagagttcaaacatgacgacaaactg
aatgaggacagtggagccttaattcagtgtgctctcctctacacatcagtaagtgggcaa
agacgacttcgcatacacaacataggcttaaattgtagcacccagttagctgatgtctac
aagacttgtgagaccgatgcacttatcaacttctttgctaaatcagcctttaaagctatc
ctaagccaaccactgaaggttgtcagagacatcctggtcagtcagacagcgcacatgttg
gcgtgctacaggaagaactgtgccagcccctcagcagtgagccagctcatccttccagac
gcaatgaaggtgctgccagtgtacatgaactgtctgctgaagagcactgtgctgactggc
agaccagaaattccaactgatgagagggcgtaccatcgacaactggtcatgtctatggga
gtagctgatacacagctgttcttctatccccagcttctgccgatacacaacctggatttg
aagagcgacgctgtgccagctgcagtgcgctgctctgaggagcgtctctcagaaggaggg
gccttcattctggccaatggtctgagcatgttcctgtggctgggggtcagcacgccccct
gaactcatccaagggcttttcaatgtgccgtcttttgcacacatcagcgcagaagctaca
ttactgcctgacctggccaatccctactctaagaaaattaagtcaatagtggagcacatc
cagaaccagaagccctacactatgaagctgatgatagtgaaacaacgggagcaaccagag
atgctattccggcagttcctcgtagaagacaagagtattcatggaggagcttcttacgtg
gatttcttatgctgtgttcacaaagagatctgccagcttctcaattaa
DBGET
integrated database retrieval system
