Lagopus muta (rock ptarmigan): 125692017
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Entry
125692017 CDS
T09141
Symbol
ABCE1
Name
(RefSeq) ATP-binding cassette sub-family E member 1
KO
K06174
ATP-binding cassette, sub-family E, member 1
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lmut03009
]
125692017 (ABCE1)
Ribosome biogenesis [BR:
lmut03009
]
Eukaryotic type
Pre-40S particles
Other pre-40S particles
125692017 (ABCE1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
Fer4_RLI
SMC_N
AAA_21
Fer4
AAA_22
AAA
Fer4_6
AAA_15
AAA_29
RsgA_GTPase
AAA_16
VapE-like_dom
nSTAND3
NACHT
Fer4_10
Rad17
AAA_30
Fer4_2
Fer4_21
SRP54
TsaE
ORC-CDC6-like
AAA_23
AAA_24
Fer4_4
Fer4_16
AAA_5
Fer4_3
AAA_19
Fer4_7
Motif
Other DBs
NCBI-GeneID:
125692017
NCBI-ProteinID:
XP_048798007
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All DBs
Position
4:11678254..11692734
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AA seq
600 aa
AA seq
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MMADKLTRIAIVNHDKCKPKKCRQECKKSCPVVRMGKLCIEVAPQSKIAWISETLCIGCG
ICIKKCPFGALSIVNLPSNLEKETTHRYCANAFKLHRLPIPRPGEVLGLVGTNGIGKSTA
LKILAGKQKPNLGKYDDPPDWQEILTYFRGSELQNYFTKILEDDLKAIIKPQYVDQIPKA
AKGTVGSILDRKDETKTQTVVCQQLDLTHLKERNVEDLSGGELQRFACAVVCIQKADIFM
FDEPSSYLDVKQRLKAAITIRSLINPDRYIIVVEHDLSVLDYLSDFICCLYGVPSAYGVV
TMPFSVREGINIFLDGYVPTENLRFRDASLVFKVAETANEEEVKKMCMYKYPGMKKKMGE
FELSIVAGEFTDSEIMVMLGENGTGKTTFIRMLAGRLTPDEGGEVPILNVSYKPQKISPK
STGSVRQLLHEKIRDAYTHPQFVTDVMKPLQIENIIDQEVQTLSGGELQRVALALCLGKP
ADVYLIDEPSAYLDSEQRLMAARVMKRFILHAKKTAFVVEHDFIMATYLADRVIVFDGVP
SKNTVANSPQTLLAGMNKFLSQLEITFRRDPNNYRPRINKLNSIKDVEQKKSGNYFFLDD
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgatggcagacaaattaacaagaattgctattgtcaaccatgacaagtgtaagccaaag
aaatgccgtcaggaatgcaagaagagttgtcctgtggttcgaatgggaaaactttgcata
gaagtcgcaccacagagcaaaatagcatggatctctgaaacactttgtattggttgtggg
atttgcatcaagaaatgtccttttggagccttgtcaattgttaacttaccgagcaacctg
gagaaagaaacaacacacagatactgtgccaatgccttcaaacttcacaggttgcctatc
cctcgtccaggtgaagtcctgggtttggttggaaccaatggtattggaaaatcaactgcc
ttgaaaattctagcaggaaagcagaagccaaatcttggaaaatatgatgacccacctgac
tggcaagaaattttgacttatttccgaggttctgaattacaaaattatttcaccaagatc
ctggaagatgacctaaaggctatcattaagcctcagtacgtggaccagatccctaaagct
gcgaagggaacggtgggatcaattctggacagaaaggatgaaactaagacacaaactgtt
gtatgtcagcagcttgacttaacccatctgaaagaaaggaatgttgaggacctttcagga
ggagagcttcagagatttgcttgtgcagttgtttgcattcagaaggctgatatcttcatg
tttgatgagccttcgagctacctggatgtcaagcagcgcttgaaagctgccattactatt
agatccctgatcaaccctgacaggtacattattgttgtagagcatgatctaagtgtgtta
gattatctctctgactttatctgctgcctgtatggtgtgccaagcgcttacggtgtcgtc
actatgcctttcagcgtaagagaaggcataaacatctttttagatggctacgttcccact
gaaaatctgaggtttcgagatgcatctctggtatttaaagtggctgaaacagcaaatgaa
gaagaggttaaaaagatgtgtatgtacaaatatccaggaatgaaaaaaaagatgggagaa
tttgaactatccatagtagctggagaatttacagattctgaaatcatggtgatgttaggg
gaaaatggaactggcaaaactacatttatccgaatgcttgcaggaagacttacacctgat
gaaggaggtgaggtcccaattctaaacgtcagctacaagccacagaagatcagccctaaa
tctacaggaagtgttcgtcagctactgcatgagaagataagagatgcctatacccatccc
cagtttgtaactgatgtaatgaaacctcttcaaatagaaaacatcattgaccaagaggtt
cagacgttgtccgggggtgagctgcagcgcgttgcgttagctctttgtcttggtaaacct
gcagatgtctacctaattgatgaaccttcagcatatttggactctgaacaacgtctgatg
gctgctagagtcatgaaacgtttcattctccatgctaaaaaaacagcttttgtggtagaa
catgactttatcatggctacatatcttgctgatcgggtgattgtttttgatggtgttcct
tccaagaacacagttgcaaacagtcctcagactctcctggctggaatgaataagttttta
tcccaacttgaaatcactttcagaagagatcctaacaactacagaccaagaataaacaaa
ctcaattcaatcaaggatgtggaacaaaagaagagtggaaactactttttcttggatgac
taa
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