Lagopus muta (rock ptarmigan): 125692076
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Entry
125692076 CDS
T09141
Symbol
LRRTM1
Name
(RefSeq) leucine-rich repeat transmembrane neuronal protein 1
KO
K16665
leucine-rich repeat transmembrane neuronal protein 1/2
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
125692076 (LRRTM1)
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_1
LRR_9
LRR_NXF1-5
LRRNT
LRR_12
UL97
HemY_N
Motif
Other DBs
NCBI-GeneID:
125692076
NCBI-ProteinID:
XP_048798131
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Position
4:67512052..67526302
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AA seq
521 aa
AA seq
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MDFLLIGLCLNWLLRKPPGLILCTLGIFSKMLPAVNSGCPQLCRCEGRLLYCESLNLTEM
PRNLSGMMGLSLRYNSLSELHDGQFTGLMQLTWLYLDHNHICSVEGNAFQKLRRVKELTL
SSNKITQLPNNTFRPMPNLRSVDLSYNNLQSLEPDLFHGLRKLTTLHMRSNAIKFVPVRI
FQDCRSLKFLDIGYNQLKSLARNSFAGLFKLTELHLEHNDLVKVNLAHFPRLISLHSLCL
RRNKVTIVVNTLDWIWQLEKLDLSGNEIEYIEPHVFESVPHLKSLQLDSNRLTYIDSRIL
DSWKSLTSISLSANTWDCGRNVCALASWLSNFKGRYDSNLLCATPEYAQGEDVLDAVYAF
HLCEDTVDPTSVNTLSPVTNNSDQMFGYGSAAATAYVPEADEEPTTYAITVTLPGEGAEN
AVQIHKVVTGTMALIFSFLIVVLVLYVSWKCFPASIRQLRQCFVTQRRKQKQKQTMHQMA
AMSAQEYYVDYKPNHIEGALVIINEYGSCSCHQQPARECEV
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atggatttccttcttatcggtctctgtttaaactggctgctgaggaagcccccggggttg
atattgtgtacgctgggtatcttttctaaaatgcttccagccgtgaatagtgggtgtcca
cagctatgtcggtgtgagggcaggcttttgtactgtgaatcactgaatctcacagagatg
cctcgcaacctgtcgggcatgatgggcttgtctctgcggtacaacagcctttcagagctg
catgacggacagttcacagggttaatgcagctcacgtggctctatctggatcacaatcac
atttgctcagtggaggggaatgcctttcaaaaattgcggcgagttaaggagctcaccctg
agttccaacaaaatcacccaactgcccaacaacacgttccgacccatgccaaacttgcgc
agtgtggatttatcgtacaacaacctgcagtcgctggagcccgacctatttcacgggctg
agaaaactcacgactttgcacatgcggtcaaacgccatcaagtttgtgccggtgagaatt
tttcaggactgtcgcagcctgaagtttctagacataggatacaatcagttaaagagcctg
gctcgaaactcttttgcgggcttgtttaagctcaccgagctgcacctcgagcacaatgac
ttggtgaaggtgaatttagcccacttccccaggctcatctccctgcactcactctgcttg
cgacggaataaagtcaccatcgtcgtcaacactttggactggatatggcaactggaaaaa
ctggatctctctggcaacgaaatcgaatacatcgaacctcatgtcttcgaaagcgtgcct
cacctcaagtccctgcagctggactccaaccggctgacctacatcgactcgcgcatcctg
gactcctggaagtctctcacgagcatcagcctgtctgccaacacctgggactgtggccgc
aacgtctgtgccctggcctcatggctgagcaacttcaagggccgctacgacagcaacctg
ctctgtgctacacccgagtacgcgcagggcgaggacgttttggatgcagtctatgctttc
cacctgtgcgaggacacggtcgaccccaccagtgtcaacaccctgtcccctgtgaccaac
aacagcgaccaaatgtttggctacggctcggcggccgccacggcctatgtgccagaggcc
gatgaggagccgacaacgtacgccatcaccgtgacactgcccggcgaaggcgcggaaaac
gccgtgcagattcacaaggtggtgacggggaccatggcactgatttttagcttcctcatc
gtggttttagtgttgtacgtctcttggaaatgctttccagccagcataaggcagctaaga
cagtgctttgtaacacagcgcaggaagcagaagcagaaacagaccatgcatcaaatggct
gccatgtcagcccaggagtattatgttgattacaaacccaaccacatcgagggagccctg
gtgatcattaatgagtacggatcttgctcctgtcaccagcagccagcgagggagtgcgag
gtgtga
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