Lagopus muta (rock ptarmigan): 125692139
Help
Entry
125692139 CDS
T09141
Symbol
CSGALNACT1
Name
(RefSeq) chondroitin sulfate N-acetylgalactosaminyltransferase 1 isoform X1
KO
K00746
chondroitin sulfate N-acetylgalactosaminyltransferase 1/2 [EC:
2.4.1.174
2.4.1.175
]
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
lmut01100
Metabolic pathways
Module
lmut_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
125692139 (CSGALNACT1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
lmut01003
]
125692139 (CSGALNACT1)
Enzymes [BR:
lmut01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.174 glucuronylgalactosylproteoglycan 4-beta-N-acetylgalactosaminyltransferase
125692139 (CSGALNACT1)
2.4.1.175 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
125692139 (CSGALNACT1)
Glycosyltransferases [BR:
lmut01003
]
Glycan extension
O-Glycan
125692139 (CSGALNACT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CHGN
Glyco_transf_7C
Glyco_tranf_2_2
F_bP_aldolase
Motif
Other DBs
NCBI-GeneID:
125692139
NCBI-ProteinID:
XP_048798235
LinkDB
All DBs
Position
4:complement(14838269..14901110)
Genome browser
AA seq
530 aa
AA seq
DB search
MMPRRGFLVLVPRLVGLLVVAFCSVSIVYMLACTPKGDTEQLALPRVHSPTAKEGYEAIL
QEREEQHRNYIISLKKQIAQLKAELQGKSEQLKSMQDHNPNPLYIHLDHSNPEKAQVNLL
AFLRAQIDRAEVHSGVKLSTEYAAVPFESFTLQKVYQLETGLTRHPEEKPVRKDKRDELV
EVIELAVGNLNNLEGDSNTKHRVYTTSDFVEGIYRTEKDKGTLYELTFKGDTKHEFKKVV
LFRPFGPVMKVKNENVNMADSLINVIVPLAKRASKFRQFMQNFREVGIQQDGRIHLTVVY
FGKEQVNEVKSILENTSKSTSFKNFTFIQLNEEFSRGKGLDVGARVWKGSNVVLFFCDVD
IYFTAEFLNSCRLNTQPGKKVFYPVLFSQYNPSIIYGHQDSIPSLEQQLIIKKETGFWRD
FGFGMTCQYRSDFINIGGFDLDIKGWGGEDVHLYRKYLHSNLIVIRTPIRGLFHLWHEKQ
CLDELTPEQYKMCMQSKAMNEASHGQLGMLVFRQEIETHLHRQKLSSKKT
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atgatgccccgacgaggatttcttgtactagtccctcggcttgtaggcctgctggtggtg
gccttttgctctgtgtccatcgtttatatgttggcttgcacacctaagggtgatactgag
cagcttgccttgcccagggttcacagtccgactgcaaaggagggatatgaagctattctg
caggagcgagaagagcagcaccgcaactacatcatcagcttgaagaagcaaatagcccag
ctgaaggctgagctccagggcaagagcgagcagcttaagagcatgcaggaccataaccca
aaccccttgtacattcatcttgaccacagtaatccagagaaggcccaggttaatctgctg
gcatttctccgtgcccaaatagacagagcagaggtgcacagtggtgttaagctgtccaca
gagtatgcagctgtaccctttgagagctttactctacagaaggtgtaccagttggagaca
gggctgacgcgccacccagaagagaaacctgtgaggaaggataagcgagatgagctggtc
gaagtgatcgagttagctgttgggaatttgaacaacctggagggggacagcaataccaag
caccgtgtatacacaacttcagacttcgtggaagggatctaccgcacagagaaagacaaa
ggcaccttgtacgagctgacttttaaaggggacacaaaacatgagttcaagaaggttgtt
ctatttcggccatttggtccagtaatgaaagtgaaaaatgaaaatgtcaatatggctgac
tcacttattaatgtgattgtgccattggccaagagagccagcaagtttcgtcagttcatg
cagaatttcagggaagtgggcattcagcaggatgggagaattcacctcacagtcgtttac
tttggaaaagaacaagtgaatgaggtcaaatctatacttgaaaatacctccaaatcaacc
agtttcaagaacttcactttcatccaactgaatgaagagttttccaggggcaaaggatta
gatgttggtgctcgagtttggaaaggaagtaatgttgttctctttttttgtgatgtggac
atatacttcacagctgaattcctgaactcctgtagattgaacacacagccaggaaagaaa
gttttctatcctgtactcttcagccaatataatcccagtataatttatggccatcaagat
tccataccatctttagaacagcagctgattattaaaaaagaaactggattttggagagac
tttggttttggaatgacttgccagtacagatctgattttatcaacataggtggctttgat
ctggacattaaaggctggggtggtgaagatgtacatctgtaccgcaaataccttcacagc
aatctcatcgtgatcagaacacccatcaggggtctcttccatctctggcatgaaaaacaa
tgtctggacgagctgaccccagagcagtacaaaatgtgcatgcaatccaaagccatgaat
gaggcttctcacggccagctaggaatgcttgtattcaggcaagagattgaaactcacctc
cacagacagaaactgagcagtaagaagacctga
DBGET
integrated database retrieval system
