Lagopus muta (rock ptarmigan): 125692199
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Entry
125692199 CDS
T09141
Symbol
PDLIM5
Name
(RefSeq) PDZ and LIM domain protein 5 isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
125692199 (PDLIM5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lmut04990
]
125692199 (PDLIM5)
Domain-containing proteins not elsewhere classified [BR:
lmut04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
125692199 (PDLIM5)
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GFIT
Motif
Pfam:
LIM
PDZ
PDZ_6
DUF4749
LIM_FHL2-3_N
Motif
Other DBs
NCBI-GeneID:
125692199
NCBI-ProteinID:
XP_048798356
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Position
4:38643124..38760274
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AA seq
597 aa
AA seq
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MSNYSVSLVGPAPWGFRLQGGKDFNMPLSISRLNDGGKAARAHVGIGDVVLTIDGISTDG
MTHLEAQNKIKACTGNLNMTLQRVASATKPDLIHVPKGEPKEVVKPVPVASAAASKVTAM
ASVAYNKTPRPFGAVASSKVTSIPSPSSAFTPAQAAPMLPTPAPFAAPGLHVNAKPNADG
RPPTPSSAKPAVNVPRQPATHNAAPGGHVGDNTQELAEGLRRGFKENQGDNKQQNGKIPP
KRPPRKHIVDTYTEFYHTPTHSDASKKRLIEDTEDWHPRTGTTQSRSFRILAQITGTDHM
KEPEHEGSKKSNDSVEPTPPATSVRNVSASHESPDAKPTPTNNATSPSAPKPTGPPSSAK
YSGWQPPSQAAPASGWTSNSIKTFGTIAPSQKFETAPQLTEQDTLVQRAEHIPAGKRTPM
CAQCNQVIRGPFLVALGKSWHPEEFNCAHCKTSMAYIGFVEEKGALYCEVCYEKFFAPEC
SKCQRKILGEVINALKQTWHVSCFVCVACHNPIRNNVFHLEDGDPYCETDYYALFGTMCH
GCEFPIEAGDRFLEALGHTWHDTCFVCSVCNDSLEGQTFFSKKDKPLCKKHAHSINI
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atgagcaactacagcgtgtctttggttggcccagctccttggggtttcaggcttcaaggt
ggcaaggatttcaacatgcccctgtccatctctcggcttaacgacggtggaaaagcagcc
cgagcacacgtggggatcggtgacgtggttctcaccattgatgggataagtacagacggg
atgactcatctagaagcacaaaacaagatcaaggcatgtacaggcaatctgaatatgact
ttgcaaagagtggcttctgcaacaaaacctgatcttattcatgtaccaaagggagaacct
aaagaagtagttaagcctgtgcctgttgcctctgctgctgcatccaaagtcactgccatg
gccagtgtggcttacaataagaccccgaggccattcggagctgtggcctcctcaaaagtc
acctccatcccgtcaccgtcctctgccttcaccccagcccaggcggcacccatgctcccc
accccggccccatttgctgcaccaggactgcatgttaacgccaagcctaatgctgatggg
cggccgcccacgccgagctctgctaaacctgccgttaatgtcccacggcagcctgccacg
cacaatgccgccccaggcggccatgtcggcgacaacacccaggagctagcggaggggctg
cgacgaggattcaaagagaaccagggtgacaataaacagcaaaatgggaaaatcccaccc
aaacgcccaccacggaagcacattgtggatacctatacggagttctaccacacccctact
cacagcgatgccagcaagaagcggctgatcgaagacactgaagactggcatccccggaca
ggcactacccagtcacgctcttttcgcatccttgcccagatcactggcactgatcatatg
aaagaaccagaacatgaaggttcaaagaagtctaatgattccgtggagcctaccccacct
gccacttcagtgaggaatgtgtctgccagccacgaaagcccagatgctaaacctaccccc
accaacaatgccacatctccttcagcacccaagccaacaggacccccaagcagtgccaag
tactcaggctggcagcctccaagccaagcagctcctgccagtggatggacatcaaacagt
attaaaacatttggaacaattgctccaagtcagaagtttgaaacagctcctcagctaaca
gagcaggacacactggttcagagggcagagcatattcctgcaggaaagcgtactccaatg
tgtgcccagtgcaatcaagtcattagaggacctttcttggtggccctggggaagtcatgg
cacccagaggaatttaactgtgctcactgcaagacttccatggcttacattggatttgtg
gaagagaaaggggctctgtactgtgaggtctgctatgagaagttctttgcacctgagtgt
tccaagtgccagaggaagatccttggagaagtaataaatgctttgaaacaaacttggcat
gtttcctgcttcgtgtgtgtggcctgtcataaccccatccgcaataatgtcttccactta
gaagatggtgatccctactgtgagacggattactacgccctcttcggtactatgtgccac
ggctgtgaattccccattgaagctggagacaggttccttgaagccctgggccacacttgg
catgacacttgctttgtatgttcggtatgtaatgacagtttggagggtcagactttcttc
tcgaagaaggacaagccactttgcaagaaacatgctcactctatcaacatctga
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