Lagopus muta (rock ptarmigan): 125692399
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Entry
125692399 CDS
T09141
Symbol
SORCS2
Name
(RefSeq) VPS10 domain-containing receptor SorCS2 isoform X1
KO
K27082
VPS10 domain-containing receptor SorCS2
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lmut04131
]
125692399 (SORCS2)
Membrane trafficking [BR:
lmut04131
]
Protein recycling
Others
Others
125692399 (SORCS2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
BNR_6
Motif
Other DBs
NCBI-GeneID:
125692399
NCBI-ProteinID:
XP_048798804
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All DBs
Position
4:60101610..60682795
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AA seq
1065 aa
AA seq
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MFHPVDHSCVPPLDALQQLHVSSAPRTPHHDAVLQVILILTKYYHTDMGKVLESSLWRSS
DFGTLYTKLNLQPGIATVIDNFYICPTNKKKIILVSSSHNDRDQSLFISTDEGATFQKQP
ITFFVETLLFHPKEEDKVLAYTKEGKVYVSTDLGKKWVLLQERVSKDHIFWAVAGVDGDP
DLVHMEIQDPSGGYRYITCQIQNCSDKTMTVQFAGVTDRDSLTVQDDYIFLQTTSANRTK
YYVSYRRNGFVQMKLPKYALPKDLQIISTDENQVFVAVQEWYQTDTYNLYQSDPQGIYYS
ILLENVRSTKQPEENVLIDILEVRGVKGVFLANQKIDGKVTTLITYNKGRDWDFLNPPDI
DMNGKPTNCKPPDCYLHLHLRWADNPYVSGTVHTKDTAPGLIMGAGNLGSQLVEYKEEMY
ITSDCGKTWRQVFEEEHHILYLDHGGVIVAIKDTSIPLKILKFSIDEGQTWSTHNFTSTS
VFVDGLLSEPGDETLVMTVFGHISYRSDWELVKVDFRPSFPRECTDDDYESWELTNLQGD
RCIMGQQRSFRKRKISSWCVKGRSFTSALTSKVCECANSDFLCDYGFERSAPLKSQSSKC
FADFWFNPEAPPEDCVLGQAYTSSSGYRKVVSNVCEGGVDLQQNLAQHLCPLIAPKGLQI
SIRGESLAVKPGEDITFIVRQEQGDVLNTKYQVDLGDGFKAIYVNLTMTGEPIRHRYENP
GIYRVSVKAENVAGHDESVVFIQVNSPLQALNLEVVPVIGRNQEVNLTAIILPKNPNLTV
FYWWIGNSLQPLLTLDSFLVTRFAVTGDVRVTVQASCGNSMLQDSKVVHVFDHFHVLPLK
FTKHLDMYNPNIPEWREDIGRVVTRLLAKETNIPEETLMTVVKPGLPTTADLHVLLPANQ
PKRKRSVTSDKRIAAIKQALNAHNISFFLRGGHWVLVTLADSDSDSQRIGGGSGYWAIVV
LFVICLVAVGAFILYKFKRKLPGRNVYAQMHNEKEQEMTSPVNHSEDTQNIIQGEEFIDD
DLDSQTLGNARVTPSGRSGNLNSYRVPLLLMPVSVQSQAITQAWF
NT seq
3198 nt
NT seq
+upstream
nt +downstream
nt
atgttccatcctgtcgatcattcttgtgttcctccactggatgctctccaacagctccac
gtctcttctgcaccgaggactccacatcacgacgcagtgctccaggtgatcctgatcctt
accaagtactatcatactgacatgggaaaagtgctggagagctctttgtggaggtcctca
gattttgggacattatacacaaagttgaatctacagcctgggattgccactgttattgac
aatttctacatttgtcccaccaacaaaaaaaagatcattcttgtaagttcttcccataat
gaccgtgaccaaagccttttcataagcacagatgaaggagctacattccagaagcaaccc
attactttctttgtggaaactcttctcttccacccaaaagaagaagacaaagtacttgct
tacacaaaggaaggcaaggtttatgtatccactgacttggggaaaaaatgggtccttctt
caggaacgtgtttcaaaagatcatattttttgggccgttgctggagttgatggagaccct
gatttagttcatatggaaattcaggaccccagtggaggttatcgctacatcacttgccag
attcagaattgttctgataagacaatgacagtccagtttgctggtgtcactgatcgggat
tccctgactgtgcaggatgactacatattccttcagacaacatcagcaaatcggaccaag
tattatgtatcctatcgtcgaaatggctttgtgcagatgaagttgccaaaatatgccttg
ccaaaagatttacagataatcagtacggatgaaaaccaggtatttgtggctgttcaggaa
tggtaccagacagacacatacaatctgtaccaatccgacccacaaggcatttactattct
atcctgctggagaacgtccggagcacgaagcagccagaagaaaatgtcctgatagatatt
ctggaggtcagaggtgtaaaaggagtctttctggccaaccagaagattgatgggaaagtt
acaaccctaataacctacaacaaaggccgtgactgggattttctaaaccctccagacatt
gatatgaatggaaaacctaccaactgcaaacctcctgattgctaccttcacctccatctc
cgctgggcagataatccatatgtgtcaggaacagtccatacgaaggatactgcaccaggg
ctcatcatgggggcaggtaacctggggtctcagctggttgagtataaagaagaaatgtac
atcacatctgactgtgggaagacatggcgccaggtctttgaagaggagcatcacatcttg
tacctggaccatggtggagttattgtggccatcaaagatacctctatcccactgaaaata
ctcaagttcagcatagatgaaggccagacttggagtacacataattttacaagcacttca
gtctttgtagatggattacttagtgaacctggagatgagacactggtcatgacagtcttt
ggacacataagttaccgctcggactgggaactggtgaaggtggacttcaggccatccttc
cccagggaatgcactgatgatgactatgaatcttgggaactcacaaatctacagggtgat
cgttgcatcatgggtcaacagaggagctttcggaagaggaagatttcatcatggtgcgtt
aaagggagaagtttcacttcagctctaacgtccaaagtctgtgaatgtgcgaactctgat
ttcttatgtgattacgggtttgagcgctctgcacctctgaagtcgcagtctagcaagtgc
tttgctgacttttggtttaatccagaagcacctcctgaagactgtgtgctggggcaggca
tacacaagcagcagtgggtacaggaaagttgtttctaatgtgtgtgaaggtggtgtagac
ctgcagcagaacttagcacagcatttgtgtccattgattgctcccaagggacttcagatc
agcatcagaggagaaagcttggctgttaagcctggggaggacatcaccttcattgtcaga
caagagcagggtgatgtattgaataccaagtaccaggtggatctcggcgatggctttaag
gcgatatatgtcaatcttacaatgactggggaacccatccgtcaccgttacgagaatcct
gggatttaccgtgtctcagtgaaggctgaaaatgttgctggacatgatgagtctgtagtg
ttcatccaagtcaactctcctctgcaggctttaaatttagaagtggttccagtcattggc
agaaaccaggaggtgaatctgacagccatcatactgcccaagaaccctaacttgacagtc
ttctactggtggataggaaacagtcttcagccacttcttacattggacagttttctggtg
acgaggttcgctgtgacaggtgatgtcagagtgacagtgcaagcttcctgcgggaactcc
atgctacaagattccaaagttgtccacgtttttgatcattttcatgttcttcctctgaag
tttaccaagcacctggacatgtacaaccccaacataccagagtggagggaagacataggg
cgtgtagtaacacgacttcttgcaaaggaaaccaatatacctgaagaaacacttatgaca
gttgtgaaacctggtctgcccacaactgctgacttgcatgtgctcctaccagcaaatcaa
cctaaaaggaagagaagtgtaactagtgataagagaatagcggctataaagcaggccttg
aatgcgcacaacatcagtttctttctgcgaggaggacactgggtcttagtgacattagca
gactctgattcagactctcaaagaattggaggaggcagtggctactgggctattgtggtt
ctctttgttatctgtctagtcgcagttggggctttcatcctctacaagttcaaaaggaaa
ctaccaggcaggaatgtctatgcccagatgcacaatgaaaaagagcaagagatgacaagc
cctgttaatcatagcgaggacacccagaacatcatccagggtgaggagtttattgatgat
gatctggactctcaaacgctaggtaacgcaagagtgactccttctgggagaagtggcaac
ttgaacagctacagagttcccctattgctgatgccggtcagtgtccagtcccaggcaatc
actcaggcgtggttttga
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