Lagopus muta (rock ptarmigan): 125692503
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Entry
125692503 CDS
T09141
Name
(RefSeq) general transcription factor IIE subunit 1-like isoform X1
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
125692503
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lmut03021
]
125692503
Transcription machinery [BR:
lmut03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
125692503
Prokaryotic type
Archaeal type
TFE
125692503
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
TFIIE-A_C
Zn_Ribbon_TF
Cas12f1-like_TNB
Tubulin
Zn_ribbon_PaaD
PyrI_C
Motif
Other DBs
NCBI-GeneID:
125692503
NCBI-ProteinID:
XP_048799049
LinkDB
All DBs
Position
4:43160532..43169068
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AA seq
427 aa
AA seq
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MMEEQNVTTEVPAALKRLAKYIVRGFYGVEYSLAVDVLTRYPCVKEDDLLQLLKYERKQL
RTVLNTLKADKFVKLRMRVETGPNGKSTRHNYYYINYKVLVDVIKYKLDHVRRKIEADER
DSTTRSSFKCPSCSSTYTDLEVNQLFDVFTETFRCTYCNTEVEEDASALPKRDARTLLAK
FNEQMEPIFMLLRETEDTVLPYDLLEPQPTAIPGISESFDQKVCSSTPEPCSRPEKWATK
NSSFGNTYSQNLIIDVQDSECKKKKKEKATKEQPIWMSESTVEGATTATINNAALTYCVL
GTNASEEAEETVKETVSENEIIKTLLIHESMKSLSSTDYAPAVKSKLSESGSDSESENAK
HSITKLAGSQFEQEEEQEALDPILMVAAQPYSYGEISENPELVSLMTNEEREAYIKVVQE
MFQSVFE
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgatggaagagcaaaacgttaccacagaagtcccagcagccctaaagcgcctggccaag
tacatagtgaggggtttctatggagtagagtactccctggccgtggatgtactgacccgc
tacccctgtgtgaaagaggatgacttgttacagctgctcaagtacgaacgcaaacagctg
cgcactgttctcaacacactcaaggcagacaagtttgtgaagctgcgtatgcgagttgaa
acagggcctaatgggaagagcacaagacacaactactattacatcaattataaggtgctg
gtggatgtgataaagtataaactggaccacgtgcggcggaagatagaagcagatgagcgg
gattcaactaccaggtcctcctttaaatgtccatcttgttctagcacatacacagacctg
gaggtcaatcaactctttgatgtatttacagagactttccgttgtacttactgcaatact
gaagtagaggaagatgcctcagcactgcctaagcgagatgctcgaaccttgctagcaaaa
ttcaatgagcagatggaacctatcttcatgctactgcgtgagacagaagatactgttctg
ccatatgacttgttggaacctcagccaacagcaatcccaggcatatcagaaagctttgac
cagaaggtatgttcaagcacgccggaaccctgcagtagacctgaaaaatgggccaccaaa
aattcctcttttggcaatacatatagtcaaaacttaattattgatgtccaagattctgag
tgcaagaagaaaaagaaagaaaaagcaactaaagagcaacctatctggatgtcagagagc
actgtagaaggagcaacaacagctaccatcaataatgctgctctaacgtattgtgtgtta
ggaacaaatgcttctgaagaagccgaagaaactgttaaagaaactgtcagcgagaatgaa
atcatcaagactcttctcatccatgaatccatgaagtcattgtccagcactgactatgct
cctgctgtcaaaagcaagttatctgaatcaggcagtgacagtgagtctgaaaatgccaaa
cactcaataacaaaattagcaggcagccagtttgaacaagaggaagagcaagaagcacta
gatcctattttaatggtagctgctcagccttactcatatggtgaaattagtgaaaatcca
gagcttgtatctctcatgacaaatgaagagagagaagcttatataaaagttgtacaagaa
atgttccagtctgtgtttgagtaa
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