Lagopus muta (rock ptarmigan): 125692542
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Entry
125692542 CDS
T09141
Symbol
FIP1L1
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1 isoform X1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
125692542 (FIP1L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lmut03019
]
125692542 (FIP1L1)
Messenger RNA biogenesis [BR:
lmut03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
125692542 (FIP1L1)
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Gene cluster
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
125692542
NCBI-ProteinID:
XP_048799160
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Position
4:complement(46071651..46108834)
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AA seq
614 aa
AA seq
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MPVPRAPRGRAGPASCACHSLGGGGEAPSGRRRFLRERVGGAGPGGARAALCRPGYPWRP
GEVGPPSREEAAEPGPGAGVPREAAMSTGEVERLSADLGGAAGDEEEEWLYGDENEAERP
EEEKTSAPPPPGNEEEAAENGIVKTKVTEAEDDSDSDSDDDEDDVQVTIGDIKTGAPQFS
YGAAPVNLNIKTGGRVYGSSAGVKVKGVDLDAPGNINGVPLLEVDLDSFEDKPWRKPGAD
LSDYFNYGFNEDTWKAYCEKQKRIRMGLEILPVTSATNKITVQQGRTGNLEKELAVQSTK
ADFTSPPALFKSGIPTNRRLSGAIDVIGQTITISRVEGRRRANENSNIQVLSERSNPEVD
NFTKPPPFFPPGAPPTHLPPPPFLPPPPTVSTAPPLIPPPGIPITVPPPGFPPPPGGPPP
SLIPTIESGHSSGYDSRSVRAFSYGGVTFPHLAGSAPSWSSLMDSSKQWDYYARREKDRE
RDRDRSRDRDRDRDRDRDRERTRDRERDRDHSPSSSAFNSDEERYRYRDYAERGYDRHRT
SREKDDRHRERRHREKEDTRHKSSRSNSRRRHDSEEGDSHRRHKHKKSKRSKEGKEASSE
PAPEQENTEAAPAE
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgcccgtgcccagggcgccgcggggccgggccgggcccgcttcctgtgcgtgtcactca
ctcggcgggggaggggaagcgccgagcgggcggcggcggttcctccgagagcgggtcggc
ggggcagggcctggcggtgctcgcgctgccctttgccgcccggggtacccgtggaggccc
ggagaggtggggccgccgagccgggaagaggccgcagagcccggcccgggagccggcgtc
ccgcgggaggcggccatgtctaccggcgaggtggagcggctgtcggcggacctcggcggg
gccgccggcgacgaggaggaggagtggctctacggcgatgaaaatgaagcagagagacca
gaagaagaaaaaactagtgctccacccccacctggaaacgaagaggaggctgcagaaaat
ggcattgtgaaaacgaaggttactgaggctgaggatgacagtgatagtgatagcgatgac
gatgaagatgatgttcaagtcaccataggagatattaaaacaggagctccacagtttagt
tatggagcagcacctgtgaacctcaatattaagacaggaggacgtgtttatggatcttct
gcaggtgtaaaagttaaaggggtggatttagatgcaccagggaatattaatggtgtacca
cttctggaagtagatctagattcttttgaagataaaccttggagaaaaccaggggctgat
ctatctgattatttcaactatgggttcaatgaagatacatggaaagcatactgtgaaaaa
cagaagaggatacgaatgggtcttgaaattttaccagttacctcagccacaaataaaatt
acggtacagcagggcagaactggaaatctggagaaagagttggcagtgcagtcgaccaaa
gctgatttcacatctcctcctgccttattcaaatcaggaattcctacaaacaggcgatta
tctggcgcaattgatgtgattggacagaccatcactatcagcagggtagagggacgacga
cgtgctaatgaaaacagcaacatacaggttctttcagaacgatctaatcctgaagtagac
aattttaccaagccacctccatttttccctccaggagctccacctactcaccttccacca
cctcctttcctcccaccccctccaactgttagtactgctccgcctctgattcctcctcca
ggtataccaataacagtaccaccaccaggctttccaccacctcctggcggtcctccacct
tccctcatacccaccatagaaagtggacattcctctggctatgacagtcgttctgttcgt
gcattttcatatggtggtgtcacctttccgcaccttgcaggttctgctccttcatggtct
agtcttatggacagcagcaaacagtgggattactatgcacggcgagagaaggacagggag
cgggacagagatcgatctcgggatcgagaccgggaccgggaccgagacagagatcgagaa
cgtaccagagacagggaaagggaccgagatcacagcccgtcctcaagcgcgttcaacagt
gatgaagaacgatacagatacagagactatgcagaaagaggctacgaccgccataggaca
agcagagagaaggatgaccgacacagagagaggaggcacagagagaaagaagatacgagg
cacaaatcatctcgaagtaacagcaggcgccgtcacgacagtgaagaaggggacagccac
agaaggcacaaacacaaaaaatccaaacgaagcaaagaaggaaaagaagccagcagtgaa
cctgctcctgagcaggaaaacactgaagctgcccccgcggaatag
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