Lagopus muta (rock ptarmigan): 125692574
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Entry
125692574 CDS
T09141
Symbol
SEC24B
Name
(RefSeq) protein transport protein Sec24B isoform X1
KO
K14007
protein transport protein SEC24
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
125692574 (SEC24B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lmut04131
]
125692574 (SEC24B)
Membrane trafficking [BR:
lmut04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
125692574 (SEC24B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_BS
Sec23_helical
zf-Sec23_Sec24
Gelsolin
Sen15
Motif
Other DBs
NCBI-GeneID:
125692574
NCBI-ProteinID:
XP_048799211
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All DBs
Position
4:complement(18091719..18135304)
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AA seq
1232 aa
AA seq
DB search
MSAPTGLPPRPAGAVAAYPGGPVGSREAAAPQSAAPHCQNGPVQSQMQFPAGYGSHPPNY
SAPSGHYSQVPNKAVPSPLDNQYRASYQSPYYSAPAQNVMTPLVGTNVLNTRESQQFYNK
TPPRTVGLTEGPVQGAIPSGSYLHTSAQQSYSAFGDHYNTSVSSSVASQGFPLNSDHYAM
PVVSSAMYPNVSYPAATSSMYGQAFTSQSLPAAGQFKETNTFSSQSTSVPHSLQQHVPVG
YNSTLSTISSAQSFQDNLSKNLTGSVAKVNNQVNRGGIDSSQPVQSVSQSVQLTKPGVGA
PASSALISSVRTPAPGLSSQPQSSPSITQSPDSALQEGMQYGGYVNNQASSAPTPLSSSS
DDEEEDEEDEEAALDSSSTTSSASPVLNNYDALEGGGYPETRSVTSSPVPTPPAPQTSKT
SKPFGYGYPTLQPAYQNTAPPTPMQPTNPSHHPGFQHYPQQYPGVNQLSSSLGGLSLQHS
QQPEGLRPVNLTQDRNILPVSSVPAPVPNLNSDLRKLNCSPDSFRCTLTNIPQTQALLNK
AKLPLGLLLHPFRDLTQLPVITSSTIVRCRSCRTYINPFVSFIDQRRWKCNLCYRVNDVP
EEFMYNPLTRSYGEPHKRPEVQNSTVEFIASSDYMLRPPQPAVYLFVLDVSHNAVDAGYL
TIVCNSLLENLDKLPGDSRTRIGFITFDSTVQFYNLQEGLSQPQMLIVSDIDDIFLPTPD
GLLVNLHESKELIKDLLNALPNMFTNTRETHSALGSALQAAFKLMSPTGGRISVFQTQLP
SLGAGLLHSREDPNQRSSTKVVQHLGPATDFYKKLALDCSGQQTAVDLFLLSSQYSDLAS
LACMSKYSAGCIYYYPSFHHSHNPAQAEKLQKDLKRYLTRKIGFEAVMRIRCTKGLSIHT
FHGNFFVRSTDLLSLANVNPDAGFAVQMSIEESLTDTSLACFQTALLYTSSKGERRIRVH
TLCLPVVNSLTDVYAGADVQAVVCLLANMAVDRSVSSSLPDARDALVNAVVDSLSAYMST
ASNLQQSMLIAPNSLKLFPVYVLALLKQKAFRTGTSTRLDDRVYAMCQIKSQPLVHMMKM
IHPNLYRIDKLIEESTIHVNDRVVPQPPLQKLSAEKLTREGAFLMDCGSNFYIWIGKNCD
NNFIKDVLGYPNYASIPQRMMQLPEIDALSSERTRSFISWLRDNRPLSPVLQVIKDENPA
KTDFFQHLIEDRTEAAFSYYEFLLHIQQQICK
NT seq
3699 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcgcccaccgggctgccgcctcggcccgctggtgccgtcgccgcttacccgggc
gggcccgttggctctcgggaggccgcggcccctcagagcgctgcgccgcactgccagaac
ggtcccgtgcagagtcaaatgcagttccctgctggctacggctcacatcctccgaactac
agtgcaccctcaggacactattcccaagtgcccaataaagctgttccatcacctttggat
aatcaatatagagccagttatcaatctccttactattcagcaccagcacaaaatgttatg
acgccactcgtgggaaccaatgtgttgaatacacgggaatcacagcagttctacaacaaa
actcctccccgtacagtggggttgactgaaggacctgttcaaggagcaataccatctgga
tcctacttgcatacaagtgctcagcagtcatattctgcatttggtgatcactacaacact
tcagtcagctcttcagttgcatctcagggatttccccttaattctgatcattatgccatg
cccgtggtttctagtgccatgtatcctaatgtttcctatcctgcagctactagcagcatg
tatgggcaggcatttacttctcagagccttcctgcagctggacagttcaaggagacaaat
acattttctagccagagtacatcagtacctcattcacttcaacagcacgttcctgtggga
tataactctacattatcaactatttcatctgctcagtcctttcaggacaacctcagcaag
aatctcactggatccgttgctaaagtaaacaaccaagtaaacagaggtggcattgattct
tcgcagcccgtgcagtctgtgagccagagcgttcagcttaccaagcctggggttggggca
cctgcttcctctgctctcatatcctcagtgaggacaccggccccaggcctttcttcacag
ccacaatcctcaccctccattacacaatcaccggactcagcccttcaggaaggcatgcag
tatggtggatatgttaataatcaagctagctctgcaccaactcccttgtcatcaagttca
gatgatgaggaagaggatgaggaggatgaggaagcagcacttgatagttcttctactact
agcagtgcgtctcctgttctgaacaattatgatgccctggaaggaggtggctatccagag
acacgctctgtgaccagcagcccagttcctactccaccagcccctcaaacatccaaaact
tccaagccctttggttatggatatccaacactgcaacctgcctaccaaaatacagcgcca
cctactcctatgcagcccactaatccaagccaccatcctgggtttcagcattatccgcag
caatatccaggtgtgaaccagctgtcctcttccttaggagggttaagtctgcagcattct
cagcagccagaaggcttgagacctgtaaaccttacacaggatagaaatattttacctgta
tcttcagttccagctcctgtgccgaacttgaattctgatcttaggaaattaaactgcagt
ccggattcatttcgatgtacattgacaaatattccacagacgcaggctttgttaaataaa
gctaaacttcctctgggtttgctgctacatcccttcagagacttaacgcaattaccagtg
ataacatcaagcacaatagtgaggtgcaggtcctgcaggacatacatcaacccttttgtt
tctttcattgatcaaaggaggtggaaatgtaatttatgctatagagttaatgacgtccct
gaagaatttatgtataatcctctgacgcgatcttatggagagccgcacaaacggccagag
gtccaaaattctacagtggagttcattgcttcctctgactatatgcttcgtcctcctcag
cctgcggtatatttatttgttctagatgtctctcataatgcagtggatgctggatatttg
acaatagtctgcaattcattgctggaaaacctggacaagctgcctggagactcaagaaca
agaataggattcataacatttgacagcactgttcagttttataacttgcaagaaggttta
tctcagcctcagatgctcattgtttcagatattgatgatattttcctacctacaccagat
ggcttactagtaaacctccatgaaagcaaagagctaataaaagatctgttgaatgcattg
ccaaatatgttcactaatacaagagaaacgcacagcgccttgggctctgctcttcaggct
gcatttaagctgatgtctccaacgggaggtcggatatctgtttttcaaactcagttacca
tccttgggtgcagggcttttgcattccagagaagatcccaatcaaaggtcgagcacaaag
gtggtccagcatcttggtccagcgacagatttctataaaaagttggcattggactgctca
ggccagcagactgctgtggatttatttctcttaagttcacaatattctgatctagcttcc
cttgcttgcatgtccaagtactctgcaggatgcatctattattacccatctttccaccat
agccataatcctgctcaggctgaaaaactgcagaaagaccttaaaagataccttaccagg
aagataggatttgaggcggttatgcgcataagatgtacaaaaggtctctcaatacacact
tttcatgggaacttttttgtccgatctactgacttactgtctctcgccaacgtcaatcct
gatgctgggtttgcagtacaaatgtccattgaggagagtctgactgacacatctttagct
tgttttcaaactgctcttttgtacacctccagcaaaggtgaacgtcgaattcgagtgcac
acactttgcttgcctgtagtaaattcactgactgatgtgtatgcaggagctgatgtacaa
gcagttgtatgcctcttagcaaacatggctgtggatcgctcagtttcatctagtcttcca
gatgcaagagatgccttagttaatgctgtggtagactctttgtcagcgtatatgtcaact
gcctcaaacctgcagcagtctatgctgatagcaccaaattccctcaagttgtttccagtc
tatgttttggctcttctcaaacagaaagcttttagaacaggcactagtacacgcttagat
gatcgtgtttatgcaatgtgccagataaagagtcagcctcttgttcacatgatgaaaatg
atacatcccaacctgtacagaatagacaagttgattgaagagagtacaatacatgtgaat
gacagagttgttcctcagcctcctcttcagaagttatctgcagagaagttgacaagagaa
ggagctttccttatggattgtggttcaaatttttatatttggattggaaagaactgtgat
aacaacttcataaaagatgtcctcggatatccaaactatgcgtcaataccccagagaatg
atgcagcttcccgagatagatgcactttcttcagaaaggacacgatctttcatatcctgg
cttagagacaacagacctttaagtcctgttcttcaagtaataaaggatgaaaatcctgcc
aaaacagatttttttcagcacttaattgaagatcggacagaagcagctttctcttattac
gaattcttactgcatattcaacagcagatttgtaagtga
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