Lagopus muta (rock ptarmigan): 125692578
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Entry
125692578 CDS
T09141
Symbol
BCOR
Name
(RefSeq) BCL-6 corepressor isoform X1
KO
K23215
bcl-6 corepressor
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
125692578 (BCOR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lmut03036
]
125692578 (BCOR)
Chromosome and associated proteins [BR:
lmut03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
125692578 (BCOR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BCOR
PUFD
Ank_2
Ank
Ank_3
Ank_5
Ank_4
ANK_LRRK2
Motif
Other DBs
NCBI-GeneID:
125692578
NCBI-ProteinID:
XP_048799222
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Position
1:111502392..111561343
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AA seq
1759 aa
AA seq
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MLSATPLYGNVHSWMSNERVRMCGINEDRKIPVNDGDAPKSRLELREENHLNHSVVDATT
AHRIDSLAALSMDRSGLMREGLRVPSSIVYSSLCGLGSEKSRDATGSIAGLGFTPERNPE
IQFKSNAPEAVENAAVSGKGPNGFSAIYKTPPGIQKNSVPTGETLGLDRAASDKQSPLGV
NGASYLRLPWVNPYMEGATPTIYPFLDSPNKYSLNMYKALLPQQSTYSLPQHLAYSPVCT
NGERFLYLPPSHYVTPHIPSSLASPMRISAASASPAIPPLVHCPDKGLSWKMGVSPGAPV
ETHAYPHLPNSKQPRVPAAKPAPSGLAPDPALLLPHSPRPSPRLPLPAQVGDAYAEFHKH
FPSIATSPSSSVPLPKPYLNVGGDFPPARLPNGKLPKAGEAAEGPAQAVPHARKASHERK
DGRSPPLLEKQAPAKDAADKPLDLSAKVVDAEGAGKVEHVKKMPPTVLVHGRAGGGPLLP
GGDAQKETLSPGTCPIYRPEIISTAPSSWIVPGPGPGEESGKSVTLKNKALDWVIPQQRS
SSCPRMGGTEAAVGSVSGTVPAGGRPASASPAPNANTDCTKAARSGMESAASVIQHVGQP
LATSAKHSNKVTKPCGQEAGFKATESALASSPIFLPPNEAFRSPHLPYPRSYLPYPVPEG
LAISPLSLHGKGHVYPHPVLLPNGSLYPGHLAPKPGLPYSLPAGRSEFMTYQDALGMGMV
HPMLLQHSALEMGKEEKGERRSRSHERARYEDPSLRGRLPELLEAGGKVHYEVASSDKVV
KLHQGSGHGKSSSKSDKHLFPELLRDEQDSKSEASLAKSGFAAESGGQANDPTKHKVEQA
SQHRDFIEFGRNSDLHDSYNFKQAPSSALFSLRKEDLSAVQGKERVAVQPAPAFLEAAHE
TDGPALTFGKAQDDAKQFCLGTAQPSLETNQTYTKDGPDDADSADGKILKPKPSKLAKRI
ANSAGYVGDRFKCVTTELYADSSQLSREQRALQMEGLQEDSILCLPAAYCERAMMRFSEL
EMKEREGQTATKDSEVCRFSQADWENLKGSSEKKPKPVALEDAIADQNDNDRCNFASAEN
NQGHFLEALEEKDLSNEKCYLERHSIYDKAEDQPTEEIGQHPCPRLDRKRKHSGERVQND
GSQSEGFVDELQDEFVSKAKKKKSSKDDWPEREMTNNSSNHLEEPNCNEVTNLKVCIELT
GLHPKKQRHLQHLRELWEQQVSPERSPSGKLGRQSRKDLAEAVQPEATAKVKDFTEERHT
KKRSEAKSNRSWSEESLKTSDNEQGLPVFPVSPHMKSLSSSNANSKRQAQPSCTPASRLA
AKQQKIKESRKTDGLYTDEEEDFQPESLLQKYAECEKPSGKRQCKTKHLALQERRRRSSL
TGDDTTDIENAEDKVAVPKKVRKRTEPTSDCDSSPAKPYEQKLYERLQPAPPPPQPAALQ
VASPPPEPPPSRPMPPEARRLIVNKNAGETLLQRAARLGYEEVVLYCLENKVCDVNHRDN
AGYCALHEACARGWLSIVRHLLEYGADVNCSAQDGTRPIHDAVENDHLEIVRLLLSYGAD
PTLATYSGRTIVKMTHSELMETFLTEYLTDLQGRNGDDPGLYWDFYGSSVCDPKDESGFD
VLANPPGPGEEDEDGFSDVFEFEFSDEPPLPCYNIQVCLSQGPRNWLLLSDVVKRLKMSS
RIFRCNFPNLEVVTITEAEFYKQTSLSQLFACATDLEAFNPESKELLDLVEFTSELKTLL
GSSLHWLHPHEDPPFDILW
NT seq
5280 nt
NT seq
+upstream
nt +downstream
nt
atgctttctgcaacccccctgtatggcaacgttcatagctggatgagcaatgaaagggtc
cgcatgtgtggaattaatgaggacaggaaaatcccagttaatgatggcgatgcaccgaaa
agcagactggagttgagggaagaaaaccacctgaatcacagtgtggtggatgcaactaca
gcccatcgaattgacagcttggcagctctgagcatggacaggtctggacttatgcgagaa
ggactcagggtccctagtagcattgtctattccagcttgtgtggacttggctctgaaaag
tcgcgggatgctacaggttctatagctggtcttggatttactcctgaaagaaatccagag
atacagtttaagtctaatgcccccgaggcagtagaaaacgcagctgtctctggaaaaggc
ccgaatggtttcagcgctatctacaaaacgccccctggaatacaaaaaaactcagtccca
acgggagaaacgctgggcttggaccgagccgcgagcgacaagcagagccctctgggcgtc
aatggtgctagctacctacggctcccctgggtgaacccctacatggagggcgcgacgccc
accatctacccttttcttgactcaccaaataagtattcgttgaacatgtacaaggcgttg
ctacctcagcagtccacctacagcttgccacagcacctggcctactcgcctgtctgcacc
aacggtgagcgcttcctctacctgcccccctcccactacgttaccccccatatcccatcc
tctctcgcctcacccatgaggatctcggctgcctcagcgtccccagccatcccgccgttg
gtgcactgtccagacaagggtctgtcatggaagatgggagtcagccccggtgctccggtc
gagacgcacgcctacccacacctgccaaacagcaagcagcctcgcgtccctgctgccaaa
ccagcacccagtggcctggcgcctgaccctgcgctcctgctgccgcactcgccccggcca
tcccctcgcctcccactgcccgcccaggtgggggatgcctacgccgagttccacaaacac
tttcccagcatcgccacgtcgccctcctcctccgtccccctccccaagccctacctgaat
gtgggtggtgacttcccacctgcccggctgcccaacggcaagctgcccaaggctggtgag
gctgctgaagggccggcacaggcagtgccccatgccaggaaagccagccatgagcggaag
gatggccgctcgcccccgctgctcgagaagcaggccccggccaaggatgctgctgacaag
cccctggacttgtcagcaaaggttgttgatgctgaaggtgccggaaaagtggagcatgtg
aaaaaaatgccaccgacagtactggtgcatggccgggcgggaggtgggccgctgcttccg
gggggtgatgcccagaaggagaccctttcccctgggacctgtcccatataccggcccgag
atcatcagcacggcaccttcctcttggatagttcctggacctggccctggtgaggagagc
ggcaagagtgtcacgctaaagaacaaggcactggactgggtgatcccgcagcagaggagc
tcctcctgccccaggatgggtggcacagaggcggcggtgggcagtgtgtcagggactgtg
ccggcagggggacggccagcttcggcctcgccagctcctaatgccaacacagattgtacc
aaggcggccaggagtggcatggagagtgcagcctcagtcatccagcatgtagggcagccc
ctggccacctcggccaagcacagcaataaggtgaccaagccctgcggccaggaagctggc
ttcaaagccactgagagcgccctggcctccagccccatcttcctgccgcccaacgaggcg
ttccgctccccacatctgccctaccccaggagttatctcccataccccgtcccagagggc
cttgccatcagccctctgtccctgcacggcaaggggcatgtctacccacacccagtcctg
ctgcccaacggcagcctctacccgggccaccttgctcccaagcctggcctcccatacagc
ctcccagctggccgcagtgagttcatgacctaccaggacgcactgggcatggggatggtg
caccccatgttgttgcagcactcagcgctggagatgggcaaggaggagaagggagagcgg
aggtcgcggtcccacgagcgggcacgctatgaggatccttcattgcgtggcaggcttcct
gagctgctggaggcaggtggcaaggtgcactatgaggttgcgtccagcgataaggtggta
aagttacaccagggatctggccatggcaagagctcctccaaaagtgacaagcatctcttc
ccagagctcctgcgggacgagcaggactctaaaagtgaggcaagcttagcaaaatctgga
tttgctgctgagagtggtggtcaggctaacgacccaacgaagcacaaggtagagcaggcg
tctcagcacagggattttattgagtttggaaggaatagtgatctgcatgacagctataat
tttaagcaagccccaagctcagcgttgttcagtttgaggaaagaagacctatctgctgtt
cagggcaaagagagagtggccgtccagcctgcgcctgccttcctggaggctgcccacgag
actgatggccccgcgctcacttttggcaaagcgcaggacgacgccaagcagttctgcttg
ggcaccgcgcagcccagcctcgaaaccaaccagacctataccaaagatggacccgatgac
gcagactctgctgatggcaaaatactgaaacccaagccatctaaactggcaaaacgcatc
gcgaactctgctggttatgtaggtgaccggttcaagtgcgtgacgaccgagctgtacgcg
gactcgagtcagctcagccgggagcagcgggcactacagatggaaggattacaagaggac
agtattttatgtctacctgctgcttactgtgagcgtgcaatgatgcgcttctcagagttg
gagatgaaagagagagaaggccaaacagctaccaaagactcagaggtctgcagattcagc
caggcagactgggaaaacttgaaaggaagcagtgaaaagaagccaaagcctgtcgctctg
gaagatgccattgctgaccaaaatgacaatgacagatgtaactttgctagtgcagaaaac
aaccaaggtcactttctcgaagctctggaggaaaaagatctctcaaatgagaaatgttat
ttagagagacattctatatacgacaaagcggaagaccagccaacagaagagattggccaa
catccatgtccgcgtctggacaggaagcgtaaacactctggtgagagagtgcaaaatgat
ggcagccaaagcgagggctttgtggacgagctgcaggatgaatttgtatcaaaggcaaaa
aagaagaagagctccaaagatgactggcctgagagggaaatgacaaacaattcctctaac
cacttagaagagcccaattgtaatgaggtgaccaacctgaaggtgtgcattgaattaaca
gggctccatcccaaaaagcagcgtcacctgcagcatcttagggaactatgggagcagcag
gtgtcaccagagagatccccgtccggcaagttgggccggcaaagcaggaaagatttagct
gaggctgttcagccagaggccactgcaaaggtcaaagacttcacagaagaaaggcacacc
aagaaaaggtcagaggccaaaagcaatagaagttggtctgaagagtccctcaaaacaagt
gacaatgaacaaggcttgcctgtattcccagtgtctccgcacatgaagagcctttcatcc
agcaatgcaaacagcaaaaggcaggctcagccaagctgcactccagcctcgaggttggct
gccaaacagcagaaaattaaagaaagccggaagacagatgggctgtacacagacgaagag
gaggatttccaacctgagtctctgctgcagaaatacgccgagtgcgagaagccatcaggg
aaacgtcagtgtaaaacaaaacacttggcactgcaggagaggaggaggaggtcatccctg
acaggggatgacaccacagatatcgaaaatgccgaagataaggtggcggtgccgaagaag
gtgaggaagcgcacggagcccacttcagactgcgactcttcgcccgccaaaccttacgag
cagaagctgtatgagcggctgcagcccgccccaccgcctccccagcctgctgcgttgcag
gtggccagtccccctcctgagcccccccccagccggcccatgccgcctgaggcccgccgt
ctcatcgtcaacaagaacgcaggcgagaccctgctgcagcgagcggcccgcctgggctac
gaggaagtggtgctgtactgtctggaaaacaaggtctgcgatgtcaaccaccgtgacaac
gcaggttactgtgccctgcatgaggcctgtgccaggggctggctgagcatcgtgcggcac
ctcctcgagtacggggctgatgtcaactgcagcgcacaggatggaaccagacctatccat
gatgcagtagaaaatgatcacttagaaattgtccgcctgttactgtcttatggtgctgac
ccaacgcttgcgacgtactcggggaggaccattgtgaagatgacccatagcgagctgatg
gagacattcctcacagagtatttaactgacctgcaaggtcgaaatggtgatgaccctggt
ttgtactgggacttctatggaagctctgtatgtgatccgaaggatgaatccggatttgat
gtcttggcaaacccccctggcccgggtgaggaagacgaagatggctttagcgatgtgttt
gagtttgaattttcagatgagcctcccttgccatgttacaacatacaagtgtgtctctct
cagggaccgcgaaactggctcttgctctcagacgtggtaaagaggctaaaaatgtcgtct
cgcatcttccgctgcaacttccccaatctggaagtcgtcaccatcacagaggcagagttt
tacaaacagacttctctcagccagttgttcgcttgtgctacggaccttgaagcgtttaac
ccagaaagcaaagagctgttggacttggtagagtttacaagcgaactcaagactttgctg
ggctcctcgcttcattggttgcatccacatgaggaccctcccttcgacatcctttggtga
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integrated database retrieval system