Lagopus muta (rock ptarmigan): 125692658
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Entry
125692658 CDS
T09141
Symbol
HERC3
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC3
KO
K10614
E3 ubiquitin-protein ligase HERC3 [EC:
2.3.2.26
]
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
125692658 (HERC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lmut04121
]
125692658 (HERC3)
Enzymes [BR:
lmut01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
125692658 (HERC3)
Ubiquitin system [BR:
lmut04121
]
Ubiquitin ligases (E3)
HECT type E3
125692658 (HERC3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RCC1
HECT
RCC1_2
Motif
Other DBs
NCBI-GeneID:
125692658
NCBI-ProteinID:
XP_048799396
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All DBs
Position
4:15881947..15925373
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AA seq
1050 aa
AA seq
DB search
MLCWGYSSFGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGL
NTKGQLGHESEGSKPEPIGALAGQHIVHVACGESHSVALSDQGQVFSWGAGSDGQLGLTT
IEDAVTVPRLIKKLNQQTILQISCGNWHCLALAADGQFFTWGQNSYGQLGLGKECPSQAS
PQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLR
SQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVSQIA
CGRHHTLAFVPSSGMIYAFGCGTRGQLGTGHTCNVKCPSPVKGHWAAHNGQLSGKPDACK
YHIVKHIFSGGDQTFVLCSKYENSLPADDFRTINETRYTCLINDETIDVWRQKLLEKNSS
NSVNNVVQILSSAACWNGSFLEKKIDEHFKTSPKIPGIDLNSTRVLFEKLMNSQHSILLD
QILKSFESFLIPQLSSSPPDVEAMRIYLILPEFPPFQDSKYYITLTLPLAMAILRLDTNP
SKVLDNWWSQVCPRYFLRLVDLYKGAVVYLLSGRKTLLIPVLFSSYITAALRLLEKLHKV
NQKVKHIEYDKFYIPEISSLVDIQEDYLMWFLHQAGMKVRPSIMQDAVTLCSYPFIFDAQ
AKTKMLQTDAELQMQVAINGANLQNVFMLLTLEPLLARSPFLVLHVRRSNLVGDALRELS
IHSDIDLKKPLKVIFDGEEAVDAGGVTKEFFLLLLKELLNPIYGMFTYYPESNLLWFSDT
CFVEHNWFHLIGIICGLAIYNFTVVDLHFPLALYKKLLNVKPCLEDLKELSPTEGRSLQQ
LLDYPGEDIEETFCLNFTICRESYGVTEHKNLIEDGDKIQVQKDNREKFVEAYVNYIFNC
SIHEWYTAFSTGFLKVCGGKVLELFQPTELRAMIVGNSNYNWEELEESAVYKGDYTATHP
TVRMFWETFHAFPLEKKKKFLLFLTGSDRIPIYGMSSLRIVIQSTANGEQYLPVAHTCYN
LLDLPKYSSKEILSARLVQAIDHYEGFSLA
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atgctatgctggggttattcatcttttggacaacctgggataggcagcaacctccaggtc
atcattcccgaaccacaggtgtatggattcattcatgacagaaatgtcaaggaggtggca
tgcggaggaaaccactcggtgttcctgctggaagatggggaagtgtacacctgtggtttg
aacaccaaaggccagctggggcacgagagtgaaggaagcaagccagaaccaattggagcc
ctggcagggcagcacatagtgcacgtggcctgcggagagtcccacagtgtggcactcagc
gaccagggccaggtcttctcctggggcgcaggcagcgatggacagctgggcctcaccact
attgaagatgcagtgacagtaccaaggctgataaagaaactgaaccaacagaccatactg
cagatttcctgtggaaactggcactgtctggctttggcagcagatggccagttctttacg
tgggggcagaacagctatggtcagttgggcttggggaaagagtgtccctctcaagcaagt
ccacagcgtgtcaagtctcttgatgggatccctttggcccaggttgctgcaggtggagcc
cacagttttgccctgtctctctcaggagctgtgtttggctggggaaagaacagctcagga
cagctgggactaagtgatgaacgagaccgagaatccccttgccatgtgaagctattgcgg
tctcagaaggttgtttatatcagctgtggagaggaacacacagcagttctaacaaagagt
ggaggggtgttcacgttcggtgcaggttcctgtgggcaactgggacatgattccatgaat
gatgaagtgaacccccgaagagttcttgagctgatgggcagtgaagtatcccagattgct
tgtggcagacatcacactttagcctttgtgccttcttcaggaatgatctatgcatttggc
tgtggaacaagaggccagctcggaactgggcacacttgcaacgttaagtgtccctctccg
gtgaagggtcactgggcagctcacaatgggcaactctcagggaaacctgatgcctgtaaa
tatcacattgttaaacatatcttctctggaggagaccaaacatttgtgctttgttccaaa
tatgagaattccttgcctgctgatgatttccggaccataaatgaaacacgttacacctgt
ttaataaatgatgaaactatagatgtctggaggcaaaagcttttagaaaagaacagttct
aattctgtcaataacgttgttcagatactgtcctcggctgcctgctggaatggaagcttc
ttggagaagaaaattgatgaacattttaagaccagtccaaagatcccagggattgatttg
aactccactagagttctgttcgagaagctgatgaactcacaacattcaattctcctagac
cagatactgaagagctttgaaagctttttgattcctcagttgtccagctcaccaccagat
gttgaggcaatgaggatctatctgattctccctgaattcccacccttccaagattcaaag
tattatatcacattaacacttcctctggcaatggctattctgcgcttggacaccaatcct
agcaaagttcttgataactggtggtctcaagtgtgtccaagatatttcctcaggctagtg
gatctctataaaggtgcagtggtttacctcctgagtggaagaaagacattgttgatccca
gtcttgttcagtagctacattacagctgctctcaggcttttggagaaactccacaaggta
aatcagaaagttaaacatatagaatatgataagttttatatccctgagatttccagcttg
gtggatattcaagaggactacctcatgtggttcttacatcaggctggaatgaaagtaaga
ccatctatcatgcaggatgctgtgactctctgttcttatcctttcatctttgatgctcag
gctaagaccaagatgttacagacagatgcagaactgcagatgcaggtggcaataaatggt
gcaaatttgcaaaatgtctttatgcttctcaccctggagcctctgctggccagaagccct
ttcctggtacttcatgttcgcaggagtaatttagtgggtgatgctctaagagagctgagt
atccattcagacattgatttgaaaaagccccttaaggtcatcttcgatggtgaggaagct
gttgatgctggaggggtgacaaaggaatttttcctcctgttgctgaaagaactcctcaac
cccatctatggcatgttcacttactacccagagtcaaacctgctgtggttttcagacacg
tgttttgtagaacacaactggtttcacttgattggcatcatatgcggtcttgcaatatac
aacttcacagtggtagaccttcactttcccttggctctgtacaaaaagctcttgaatgtg
aagccatgcctagaggatttgaaggagctgtcccctacagaaggaaggagtcttcagcag
cttttagattatcctggggaagatatagaggagacgttctgcttgaactttacaatctgc
agggagagctatggtgtgacagagcacaagaacctgattgaagacggtgacaaaattcag
gtgcagaaggataatagggaaaaatttgttgaagcctatgtaaattacatcttcaactgc
tccatccacgagtggtacacagctttctccactggcttcctgaaagtgtgtggtgggaaa
gtcctggagctcttccagcccacagagctcagggccatgatagttggaaacagcaactac
aactgggaggaactggaggagagtgctgtctataagggagactacactgcgacgcaccca
accgtgagaatgttttgggaaacctttcatgcatttcccttggaaaagaagaagaaattt
ctcctgtttctgacgggcagtgaccgcatccccatctatggcatgtcgagcctccgcatt
gtcatccagtccaccgccaacggggagcagtacctgcctgtggcacacacctgctacaac
ctcctggacctgcccaagtacagcagcaaggagatcctcagtgcccggctggtgcaagcc
attgatcactacgagggcttcagcttagcttga
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